Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 1384
Gene Symbol: CRAT
CRAT
0.010 GeneticVariation disease BEFREE By performing whole-exome sequencing in a girl affected by Leigh syndrome and her parents, we identified two heterozygous missense variants (p.Tyr110Cys and p.Val569Met) in the carnitine acetyltransferase (CRAT) gene, encoding an enzyme involved in the control of mitochondrial short-chain acyl-CoA concentrations. 31448845 2020
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.010 AlteredExpression disease BEFREE Collectively, these findings demonstrate that downregulation of renal TNF production in response to LS conditions contributes to the regulation of sodium chloride reabsorption via an NKCC2B-dependent mechanism. 31813248 2020
Entrez Id: 4360
Gene Symbol: MRC1
MRC1
0.010 GeneticVariation disease BEFREE Lynch Syndrome (LS) patients harbor germline mutations in one of several mismatch repair (MMR) genes and are predisposed to the development of colon and endometrial cancers and multiple other cancers types as well. 31392519 2019
Entrez Id: 4726
Gene Symbol: NDUFS6
NDUFS6
0.010 GeneticVariation disease BEFREE Here, we present a patient harboring two NDUFS6 variants with a phenotype compatible with Leigh syndrome. 30948790 2019
Entrez Id: 51300
Gene Symbol: TIMMDC1
TIMMDC1
0.010 GeneticVariation disease BEFREE Whole exome sequencing of a patient with Leigh-like syndrome identified homozygous protein-truncating variants in two genes associated with Leigh syndrome; a reported pathogenic variant in PDHX (NP_003468.2:p.(Arg446*)), and an uncharacterized variant in complex I (CI) assembly factor TIMMDC1 (NP_057673.2:p.(Arg225*)). 30981218 2019
Entrez Id: 2475
Gene Symbol: MTOR
MTOR
0.010 Biomarker disease BEFREE Inhibiting the mammalian target of rapamycin (mTOR) pathway has been shown in model mice of Leigh syndrome to extend lifespan and attenuate both the clinical and pathological progression of disease. 31386302 2019
Entrez Id: 1890
Gene Symbol: TYMP
TYMP
0.010 Biomarker disease BEFREE It was commonly observed in subjects with chronic progressive external ophthalmoplegia (cPEO) and with primary myopathy without cPEO, but also-although less frequently-in multisystem phenotypes such as MELAS, MERFF, Kearns Sayre syndrome, NARP, MNGIE and Leigh syndrome. 30710167 2019
Entrez Id: 7296
Gene Symbol: TXNRD1
TXNRD1
0.010 Biomarker disease BEFREE A popular mouse model of mitochondrial disease that lacks NADH:ubiquinone oxidoreductase subunit S4 (NDUFS4), a subunit of mitochondrial complex I, phenocopies many traits of the human disease Leigh syndrome, including the development of optic atrophy. 31248988 2019
Entrez Id: 51117
Gene Symbol: COQ4
COQ4
0.010 GeneticVariation disease BEFREE Our cases expand the phenotypic spectrum of COQ4 mutations and the genotypic spectrum of Leigh syndrome. 30659264 2019
Entrez Id: 1327
Gene Symbol: COX4I1
COX4I1
0.010 GeneticVariation disease BEFREE Biallelic variants in COX4I1 associated with a novel phenotype resembling Leigh syndrome with developmental regression, intellectual disability, and seizures. 31290619 2019
Entrez Id: 8630
Gene Symbol: HSD17B6
HSD17B6
0.010 Biomarker disease BEFREE A popular mouse model of mitochondrial disease that lacks NADH:ubiquinone oxidoreductase subunit S4 (NDUFS4), a subunit of mitochondrial complex I, phenocopies many traits of the human disease Leigh syndrome, including the development of optic atrophy. 31248988 2019
Entrez Id: 84833
Gene Symbol: ATP5MD
ATP5MD
0.010 AlteredExpression disease BEFREE Fibroblasts from two Leigh syndrome probands had reduced wild-type USMG5 mRNA expression and undetectable protein. 29917077 2018
Entrez Id: 2688
Gene Symbol: GH1
GH1
0.010 Biomarker disease BEFREE Work on the GH receptor (R)-knockout (GHRKO) mice and results of studies on GH-resistant Laron Syndrome (LS) patients have helped define many physiological actions of GH including those dealing with metabolism, obesity, cancer, diabetes, cognition and aging/longevity. 29459441 2018
Entrez Id: 64116
Gene Symbol: SLC39A8
SLC39A8
0.010 GeneticVariation disease BEFREE Mutations in the SLC39A8 gene are associated with congenital disorder of glycosylation type II and Leigh syndrome. 29453449 2018
Entrez Id: 2395
Gene Symbol: FXN
FXN
0.010 Biomarker disease BEFREE Insights from these studies have contributed to our understanding of known neurodegenerative diseases such as Leigh syndrome and Friedreich's ataxia and have also led to the identification of new human diseases. 30693015 2018
Entrez Id: 5395
Gene Symbol: PMS2
PMS2
0.010 Biomarker disease BEFREE Lynch syndrome (LS) patients with isolated PMS2 loss in the colon cancer, while intact MMR in the prostate cancer, are exceedingly rare.Herein, we report such a case. 30061258 2018
Entrez Id: 2690
Gene Symbol: GHR
GHR
0.010 Biomarker disease BEFREE Work on the GH receptor (R)-knockout (GHRKO) mice and results of studies on GH-resistant Laron Syndrome (LS) patients have helped define many physiological actions of GH including those dealing with metabolism, obesity, cancer, diabetes, cognition and aging/longevity. 29459441 2018
Entrez Id: 60386
Gene Symbol: SLC25A19
SLC25A19
0.010 Biomarker disease BEFREE Mutations in thiamine transporter, TDP synthesizing enzyme or carrier, including solute carrier family 19 member 3 (SLC19A3), thiamine pyrophosphokinase (TPK1) and solute carrier family 25 member 19 (SLC25A19), have been associated with developmental neurological disorders, including microcephaly and Leigh syndrome. 28706281 2017
Entrez Id: 2768
Gene Symbol: GNA12
GNA12
0.010 Biomarker disease BEFREE In addition, RMP-7-Lf-QU-LS significantly reduced Aβ-induced neurotoxicity and improved the viability of SK-N-MC cells. 28435263 2017
Entrez Id: 4436
Gene Symbol: MSH2
MSH2
0.010 Biomarker disease BEFREE In conclusion, our comprehensive strategy combining germline and somatic mutational status of CRC-associated genes by means of a subexome panel allows the elucidation of up to 86% of MSH2-deficient suspected LS tumors. 28577310 2017
Entrez Id: 24
Gene Symbol: ABCA4
ABCA4
0.010 Biomarker disease BEFREE In addition, RMP-7-Lf-QU-LS significantly reduced Aβ-induced neurotoxicity and improved the viability of SK-N-MC cells. 28435263 2017
Entrez Id: 6198
Gene Symbol: RPS6KB1
RPS6KB1
0.010 Biomarker disease BEFREE Here we tested whether disruption of S6K1 can recapitulate the beneficial effects of mTORC1 inhibition in the Ndufs4 knockout (NKO) mouse model of Leigh Syndrome caused by Complex I deficiency. 28919908 2017
Entrez Id: 27010
Gene Symbol: TPK1
TPK1
0.010 Biomarker disease BEFREE Mutations in thiamine transporter, TDP synthesizing enzyme or carrier, including solute carrier family 19 member 3 (SLC19A3), thiamine pyrophosphokinase (TPK1) and solute carrier family 25 member 19 (SLC25A19), have been associated with developmental neurological disorders, including microcephaly and Leigh syndrome. 28706281 2017
Entrez Id: 80025
Gene Symbol: PANK2
PANK2
0.010 GeneticVariation disease BEFREE Dystonia is common in Leigh syndrome (which may be caused by 75 different genes) and in Leber hereditary ocular neuropathy (LHON) plus disease, due to mutations in mtDNA genes that encode subunits of NADH dehydrogenase, as well as in ARCA2, pantothenate kinase-associated neurodegeneration (PKAN), mitochondrial membrane protein-associated neurodegeneration (MPAN) and POLG1 mutations. 27476418 2017
Entrez Id: 5226
Gene Symbol: PGD
PGD
0.010 GeneticVariation disease BEFREE We report on the first PGD performed for the m.14487 T>C mitochondrial DNA (mtDNA) mutation in the MT-ND6 gene, associated with Leigh syndrome. 28122886 2017