Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 947
Gene Symbol: CD34
CD34
0.100 GeneticVariation disease BEFREE <i>Materials and methods</i> We compared DNA methylation of 1,505 selected promoter CpGs in chronic myelogenous leukemia (CML), acute lymphoblastic leukemia (ALL) with and without the Philadelphia chromosome t(9:22), CD34+ hematopoietic stem cells transfected with <i>BCR-ABL</i>, and other tumors without <i>BCR-ABL</i> (acute promyelocytic leukemia (APL) and gastrointestinal stromal tumors (GIST). 28730166 2017
Entrez Id: 1030
Gene Symbol: CDKN2B
CDKN2B
0.100 GeneticVariation disease BEFREE <i>TP53</i> alterations are present in almost all cases of ALL with low hypodiploidy and are associated with alterations of the lymphoid transcription factor <i>IKZF2</i> and the tumor-suppressor gene loci <i>CDKN2A</i> and <i>CDKN2B.</i> Remarkably, more than half of <i>TP53</i> mutations in low-hypodiploid ALL in children are present in nontumor cells, indicating that low-hypodiploid ALL is a manifestation of Li-Fraumeni syndrome. 28003275 2017
Entrez Id: 2099
Gene Symbol: ESR1
ESR1
0.010 Biomarker disease BEFREE (ii) A second region of 6q, which was distal to 6q23.1 (D6S238) and included ESR (6q25.1) and D6S281 (6q27), which was shown to be present in all our cases of ALL, was found to be deleted in 4 of the 7 cases of NHL. 7522544 1994
Entrez Id: 2335
Gene Symbol: FN1
FN1
0.020 Biomarker disease BEFREE 1.Small, N- to C-terminal cyclized peptides containing the leucyl-aspartyl-valine (LDV) motif from fibronectin connecting segment-1 (CS-1) have been investigated for their effects on the adhesion of human T-lymphoblastic leukaemia cells (MOLT-4) to human plasma fibronectin in vitro mediated by the integrin Very Late Antigen (VLA)-4 (alpha4beta1, CD49d/CD29).2. 10372817 1999
Entrez Id: 3688
Gene Symbol: ITGB1
ITGB1
0.010 Biomarker disease BEFREE 1.Small, N- to C-terminal cyclized peptides containing the leucyl-aspartyl-valine (LDV) motif from fibronectin connecting segment-1 (CS-1) have been investigated for their effects on the adhesion of human T-lymphoblastic leukaemia cells (MOLT-4) to human plasma fibronectin in vitro mediated by the integrin Very Late Antigen (VLA)-4 (alpha4beta1, CD49d/CD29).2. 10372817 1999
Entrez Id: 2217
Gene Symbol: FCGRT
FCGRT
0.010 GeneticVariation disease BEFREE 11 out of 18 T-ALLs were T3 positive; alpha-chain gene rearrangements were demonstrated in only two of 18, indicating that the majority of T-ALLs would have rearrangements involving J alpha segments located upstream of these probes. 3500187 1987
Entrez Id: 100310785
Gene Symbol: ALL1
ALL1
0.100 Biomarker disease BEFREE 11q23 translocations (t(11q23)) are recurring cytogenetic abnormalities in both acute myeloid leukemia (AML) and acute lymphoblastic leukemia, involving the same gene, ALL1 (or MLL). 9529125 1998
Entrez Id: 4297
Gene Symbol: KMT2A
KMT2A
0.300 Biomarker disease BEFREE 11q23 translocations (t(11q23)) are recurring cytogenetic abnormalities in both acute myeloid leukemia (AML) and acute lymphoblastic leukemia, involving the same gene, ALL1 (or MLL). 9529125 1998
Entrez Id: 4297
Gene Symbol: KMT2A
KMT2A
0.300 Biomarker disease BEFREE 11q23/MLL rearrangement confers a poor prognosis in infants with acute lymphoblastic leukemia. 8164041 1994
Entrez Id: 53335
Gene Symbol: BCL11A
BCL11A
0.010 AlteredExpression disease BEFREE 14q32/miRNA clusters loss of heterozygosity in acute lymphoblastic leukemia is associated with up-regulation of BCL11a. 20578197 2010
Entrez Id: 373156
Gene Symbol: GSTK1
GSTK1
0.100 GeneticVariation disease BEFREE 24, 95% CI 0.98-1.56), whereas acute lymphoblastic leukaemia (ALL) was associated with GST T1 null (OR 3.28, 95% CI 1.31-8.26). 10607732 2000
Entrez Id: 133482
Gene Symbol: SLCO6A1
SLCO6A1
0.100 GeneticVariation disease BEFREE 24, 95% CI 0.98-1.56), whereas acute lymphoblastic leukaemia (ALL) was associated with GST T1 null (OR 3.28, 95% CI 1.31-8.26). 10607732 2000
Entrez Id: 7441
Gene Symbol: VPREB1
VPREB1
0.020 Biomarker disease BEFREE 36 (82%) of the patients with BCR-ABL1-like disease had deletions in genes involved in B-cell development, including IKZF1, TCF3, EBF1, PAX5, and VPREB1; only nine (36%) of 25 patients with B-other ALL had deletions in these genes (p=0.0002). 19138562 2009
Entrez Id: 1026
Gene Symbol: CDKN1A
CDKN1A
0.040 Biomarker disease BEFREE 5' CpG island hypermethylation is associated with transcriptional silencing of the p21(CIP1/WAF1/SDI1) gene and confers poor prognosis in acute lymphoblastic leukemia. 11895758 2002
Entrez Id: 56996
Gene Symbol: SLC12A9
SLC12A9
0.010 Biomarker disease BEFREE 5' CpG island hypermethylation is associated with transcriptional silencing of the p21(CIP1/WAF1/SDI1) gene and confers poor prognosis in acute lymphoblastic leukemia. 11895758 2002
Entrez Id: 2187
Gene Symbol: FANCB
FANCB
0.100 GeneticVariation disease BEFREE 50) has been established from peripheral blood of a 69-year-old male with acute lymphoblastic leukemia (FAB type L3). 8019967 1994
Entrez Id: 611
Gene Symbol: OPN1SW
OPN1SW
0.100 GeneticVariation disease BEFREE 86.6% of the promoter-associated differentially methylated sites were hypermethylated in BCP ALL. 29125853 2017
Entrez Id: 613
Gene Symbol: BCR
BCR
0.100 GeneticVariation disease BEFREE 95% of Chronic Myelocytic (CML) and 15-25% of Acute Lymphoblastic Leukemia (ALL) patients are Ph1 producing a fusion transcript between the abl proto-oncogene and the bcr gene. 8251913 1993
Entrez Id: 121256
Gene Symbol: TMEM132D
TMEM132D
0.100 Biomarker disease BEFREE : Erythrina</i>; ERα/β: Estrogen receptors α/β; EtOAc: Ethyl acetate; EtOH: Ethanol; Hep-G2: Human liver carcinoma cell lines; HIV: Human immunodeficiency virus; HL-60: Human promyelocytic leukemia cells; K-562: Human immortalized myelogenous leukemia cell line; LPS: Lipopolysaccharide; MeOH: Methanol; MOLT-4: Acute lymphoblastic leukemia cell line; nAChRs: nicotinic acetylcholine receptors; NO: Nitric oxide; NREM: non-rapid eye movement; Pet. ether: Petroleum ether; RBA: Receptor binder affinity; TRAIL: Tumor necrosis factor (TNF)-related apoptosis-inducing ligand. 31226894 2019
Entrez Id: 4297
Gene Symbol: KMT2A
KMT2A
0.300 GeneticVariation disease BEFREE Acute lymphoblastic leukemia (ALL) and acute myeloid leukemia (AML) in infants have in common a high incidence of translocations of the MLL gene at chromosome band 11q23. 10394590 1999
Entrez Id: 4311
Gene Symbol: MME
MME
0.100 GeneticVariation disease BEFREE Acute lymphoblastic leukemia (ALL) in infants under 1 year is strongly associated with translocations involving 11q23 (MLL gene), CD10-negative B-lineage (proB) immunophenotype, and poor outcome. 14712291 2004
Entrez Id: 4297
Gene Symbol: KMT2A
KMT2A
0.300 GeneticVariation disease BEFREE Acute lymphoblastic leukemia (ALLs) expressing MLL-AF4, the fusion product of t(4;11)(q21;q23), show marked leucocytosis and extramedullary disease in multiple organs, respond poorly to chemotherapy and have poor prognosis. 14990976 2004
Entrez Id: 2737
Gene Symbol: GLI3
GLI3
0.010 GeneticVariation disease BEFREE Acute lymphoblastic leukemia in a patient with Greig cephalopolysyndactyly and interstitial deletion of chromosome 7 del(7)(p11.2 p14) involving the GLI3 and ZNFN1A1 genes. 15390181 2005
Entrez Id: 10320
Gene Symbol: IKZF1
IKZF1
0.400 GeneticVariation disease BEFREE Acute lymphoblastic leukemia in a patient with Greig cephalopolysyndactyly and interstitial deletion of chromosome 7 del(7)(p11.2 p14) involving the GLI3 and ZNFN1A1 genes. 15390181 2005
Entrez Id: 1536
Gene Symbol: CYBB
CYBB
0.010 GeneticVariation disease BEFREE Acute lymphoblastic leukemia in a patient with chronic granulomatous disease and a novel mutation in CYBB: first report. 16138344 2005