Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 10320
Gene Symbol: IKZF1
IKZF1
0.420 AlteredExpression disease BEFREE We examined the expression of Ikaros isoforms in 11 leukemic cell lines and adult acute lymphoblastic leukemia cells from 36 patients with B-precursor acute lymphoblastic leukemia (pre-B ALL) and nine with T-precursor acute lymphoblastic leukemia (pre-T ALL), using reverse transcriptase-polymerase chain reaction (RT-PCR) analysis. 12094252 2002
Entrez Id: 10320
Gene Symbol: IKZF1
IKZF1
0.420 Biomarker disease BEFREE Reconstitution of PAX5 and IKZF1 in samples from patients with pre-B ALL restored a non-permissive state and induced energy crisis and cell death. 28192788 2017
Entrez Id: 6929
Gene Symbol: TCF3
TCF3
0.370 GeneticVariation disease BEFREE Thus rearrangement of the E2A gene is not restricted to cases with pre-B ALL but may also occur in acute leukemias with other immunological phenotypes. 1999956 1991
Entrez Id: 6929
Gene Symbol: TCF3
TCF3
0.370 GeneticVariation disease BEFREE The E2A gene is involved by the t(1;19)(q23;p13) in acute pre-B-cell leukemias and the LYL1 gene is structurally altered by a t(7;19)(q34;p13) in T-cell ALL. 2268576 1990
Entrez Id: 6929
Gene Symbol: TCF3
TCF3
0.370 GeneticVariation disease BEFREE Increased risk for CNS relapse in pre-B cell leukemia with the t(1;19)/TCF3-PBX1. 19282835 2009
Entrez Id: 6929
Gene Symbol: TCF3
TCF3
0.370 GeneticVariation disease BEFREE Establishment of a novel cell line (TS-2) of pre-B acute lymphoblastic leukemia with a t(1;19) not involving the E2A gene. 9494609 1998
Entrez Id: 6929
Gene Symbol: TCF3
TCF3
0.370 GeneticVariation disease BEFREE The 'promiscuous' E2A gene, at 19p13.3, is fused with two different molecular partners, PBX1 and HLF, following two chromosome translocations recurrent in childhood pre-B ALL. 10086727 1999
Entrez Id: 6929
Gene Symbol: TCF3
TCF3
0.370 GeneticVariation disease BEFREE Using a specific E2A gene probe spanning the DNA binding and dimerization domain obtained by PCR methodology, we were able to detect the rearrangement of the E2A gene in four cases (three patients and one cell line) of pre-B acute lymphoblastic leukemia with t(1;19) translocation. 2243503 1990
Entrez Id: 6929
Gene Symbol: TCF3
TCF3
0.370 GeneticVariation disease BEFREE When intensive chemotherapy was used, the TCF3-PBX1 was associated with a favorable outcome in childhood pre-B ALL. 25551271 2015
Entrez Id: 861
Gene Symbol: RUNX1
RUNX1
0.360 Biomarker disease BEFREE The TEL-AML1 transgenic zebrafish models human pre-B ALL, identifies the molecular pathways associated with leukemia development, and serves as the foundation for subsequent genetic screens to identify modifiers and leukemia therapeutic targets. 17015828 2006
Entrez Id: 861
Gene Symbol: RUNX1
RUNX1
0.360 AlteredExpression disease BEFREE Interestingly, we found that human FMN2 is overexpressed in approximately 95% of pre-B acute lymphoblastic leukemia with the highest expression levels in patients with a TEL/AML1 rearrangement. 21135260 2011
Entrez Id: 861
Gene Symbol: RUNX1
RUNX1
0.360 Biomarker disease BEFREE The IgH, TCR and TEL-AML1 markers can be used as targets by real-time PCR under the same cycling profile, allowing quantitation of MRD in more 95% of patients with pre-B ALL. 12571459 2003
Entrez Id: 861
Gene Symbol: RUNX1
RUNX1
0.360 Biomarker disease BEFREE The authors describe a 7-year-old boy with TEL/AML1-positive pre-B acute lymphoblastic leukemia, with hemizygous 9p21 deletion at presentation and no p16(INK4A) protein expression. 16344676 2005
Entrez Id: 861
Gene Symbol: RUNX1
RUNX1
0.360 Biomarker disease BEFREE We propose, in some cases, that the TEL-AML1 translocation occurs in a stem or B progenitor cell, and that recurrent TEL-AML1-positive pre-B ALL represents a de novo-transformed population that retains the same diagnostic initiating event. 12526921 2003
Entrez Id: 861
Gene Symbol: RUNX1
RUNX1
0.360 GeneticVariation disease BEFREE The TEL/AML1 translocation, which is specific for pre B-cell leukemias is predictive of a favorable treatment outcome. 9824651 1998
Entrez Id: 5079
Gene Symbol: PAX5
PAX5
0.330 AlteredExpression disease BEFREE PAX5 expression was also evaluated in three different B-ALL subgroups (pro B, Common B and Pre B ALL) and showed stage specific expression levels. 21813177 2012
Entrez Id: 2120
Gene Symbol: ETV6
ETV6
0.330 AlteredExpression disease BEFREE Interestingly, we found that human FMN2 is overexpressed in approximately 95% of pre-B acute lymphoblastic leukemia with the highest expression levels in patients with a TEL/AML1 rearrangement. 21135260 2011
Entrez Id: 2120
Gene Symbol: ETV6
ETV6
0.330 Biomarker disease BEFREE The IgH, TCR and TEL-AML1 markers can be used as targets by real-time PCR under the same cycling profile, allowing quantitation of MRD in more 95% of patients with pre-B ALL. 12571459 2003
Entrez Id: 5079
Gene Symbol: PAX5
PAX5
0.330 Biomarker disease BEFREE Activation of PAX5 paralogs, PAX2 or PAX8, ordinarily silenced in lymphocytes, may therefore represent a novel approach for treating PAX5-deficient ALL. 30216339 2018
Entrez Id: 2120
Gene Symbol: ETV6
ETV6
0.330 Biomarker disease BEFREE Rearrangements in intron 5 of ETV6 were found in eight of nine cases of children with c-ALL of which six carried the ETV6/AMLI fusion. 9665196 1998
Entrez Id: 5079
Gene Symbol: PAX5
PAX5
0.330 Biomarker disease BEFREE Reconstitution of PAX5 and IKZF1 in samples from patients with pre-B ALL restored a non-permissive state and induced energy crisis and cell death. 28192788 2017
Entrez Id: 1490
Gene Symbol: CCN2
CCN2
0.310 Biomarker disease BEFREE These findings indicate that CTGF is secreted by pre-B ALL cells and may play a role in the pathophysiology of this disease. 17760805 2007
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.140 GeneticVariation disease BEFREE Homozygous deletions of all or part of the CDKN2 gene were detected in 21 (84%) cell lines, including 11 of 14 (79%) early-pre-B-ALL, four of five (80%) pre-B-ALL, and six of six T-ALL lines. 7630190 1995
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.140 GeneticVariation disease BEFREE The authors describe a 7-year-old boy with TEL/AML1-positive pre-B acute lymphoblastic leukemia, with hemizygous 9p21 deletion at presentation and no p16(INK4A) protein expression. 16344676 2005
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.140 GeneticVariation disease BEFREE We have established a novel pre-B acute lymphoblastic leukemia (ALL) cell line (JKB2) with a chromosomal translocation between 9p2l and 14q32, on which p16INK4A/p15INK4B and heavy chain immunoglobulin (Ig) genes, respectively, are located. 8847892 1996