Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 3558
Gene Symbol: IL2
IL2
0.400 GeneticVariation disease BEFREE Transforming activity was further demonstrated by the ability of the FBXW7 D510E mutant to provide IL-2-independent growth of Tax-immortalized human T cells and increase the tumor formation in a xenograft mouse model of ATL. 27247421 2016
Entrez Id: 1233
Gene Symbol: CCR4
CCR4
0.400 GeneticVariation disease BEFREE This study suggests that frequencies of CCR4 expression and genomic CCR4 mutations and an association between the two may be considerably different between ATL cases and non-ATL T/NK-cell lymphomas. 31468320 2019
Entrez Id: 1233
Gene Symbol: CCR4
CCR4
0.400 GeneticVariation disease BEFREE Furthermore, among ATLL cases, FS mutation was significantly associated with a poor prognosis, compared with NS mutation and WT CCR4. 26847489 2016
Entrez Id: 1233
Gene Symbol: CCR4
CCR4
0.400 GeneticVariation disease BEFREE These findings implicate somatic gain-of-function CCR4 mutations in the pathogenesis of ATLL and suggest that inhibition of CCR4 signaling might have therapeutic potential in this refractory malignancy. 25488980 2014
Entrez Id: 3662
Gene Symbol: IRF4
IRF4
0.400 GeneticVariation disease BEFREE All HTLV-1 infected cell lines and ATL patient lymphocytes demonstrated a dramatic decrease in cyclin B1 levels; subsequent analysis of the cyclin B1 promoter identified two sites important in IRF-4 binding and repression of cyclin B1 expression. 12360402 2002
Entrez Id: 3558
Gene Symbol: IL2
IL2
0.400 GeneticVariation disease BEFREE DNA sequence of the 5' flanking region of the human interleukin 2 gene: homologies with adult T-cell leukemia virus. 6330695 1984
Entrez Id: 3439
Gene Symbol: IFNA1
IFNA1
0.350 GeneticVariation disease BEFREE In this study, we demonstrate that an As(2)O(3) and IFN-α combination, known to trigger Tax proteolysis, cures Tax-driven ATL in mice. 21135137 2010
Entrez Id: 6774
Gene Symbol: STAT3
STAT3
0.340 GeneticVariation disease BEFREE STAT3 mutations were detected in 36% (10/28) and 19% (12/64) of cases with the smoldering and aggressive types of ATLL, respectively. 31237072 2019
Entrez Id: 22807
Gene Symbol: IKZF2
IKZF2
0.310 GeneticVariation disease BEFREE HELIOS-BCL11B fusion gene involvement in a t(2;14)(q34;q32) in an adult T-cell leukemia patient. 22867996 2012
Entrez Id: 5579
Gene Symbol: PRKCB
PRKCB
0.310 GeneticVariation disease BEFREE The most significantly enriched variants, causing p.Lys469Ter in a splice variant of POLK and p.Pro588His in PRKCB, are intriguing candidates as Polk deficient mice display a spontaneous mutator phenotype, whereas PRKCB was recently shown to be somatically mutated in 33% of another peripheral T-cell lymphoma, adult T-cell lymphoma. 30097855 2019
Entrez Id: 7057
Gene Symbol: THBS1
THBS1
0.100 GeneticVariation disease BEFREE The splice junctions for the tax-rex mRNA described in cases of HTLV-I-induced adult T-cell leukemia (position 5183 of the envelope and position 7302 of the pX region) were identical in three TSP/HAM cases studied. 1995955 1991
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.100 GeneticVariation disease BEFREE To determine if p19 genetic alterations play a role in hematopoietic malignancies, we examined DNA from 45 childhood newly diagnosed acute lymphocytic leukemias (ALLs), 30 acute myeloblastic leukemias (AMLs), 10 chronic myelocytic leukemias (CMLs), 45 adult T cell leukemias (ATLs), 70 non-Hodgkin's lymphomas (NHLs), and 20 multiple myelomas (MM) as well as 14 ALL, 20 AML, two ATL, and five lymphoma cell lines. 8946928 1996
Entrez Id: 6900
Gene Symbol: CNTN2
CNTN2
0.100 GeneticVariation disease BEFREE The premature stop codon in tax gene existed in many non-ATL HTLV-I carriers as a minor population but not in the commonest HTLV-I sequence of the individual. 16052518 2006
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.100 GeneticVariation disease BEFREE Our results suggest that the CDKN2 gene is inactivated not only by homozygous deletion but also by point mutation, and these alterations contribute to the aggressiveness of ATL. 8826890 1996
Entrez Id: 110006328
Gene Symbol: ERVK-32
ERVK-32
0.100 GeneticVariation disease BEFREE The human T-cell leukemia viruses (HTLV) are replication-competent retroviruses whose genomes contain gag, pol, and env genes as well as a fourth gene, termed x, which is believed to be the transforming gene of HTLV. 2990032 1985
Entrez Id: 6900
Gene Symbol: CNTN2
CNTN2
0.100 GeneticVariation disease BEFREE First, a premature stop codon in the 5' half of the tax gene that looses transactivation activity on the viral enhancer was observed in 3 patients with acute and 1 patient with chronic ATL. 11159527 2001
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.100 GeneticVariation disease BEFREE CDKN2 (MTS1/p16INK4A) gene alterations in adult T-cell leukemia/lymphoma. 9638973 1998
Entrez Id: 6962
Gene Symbol: TRBV20OR9-2
TRBV20OR9-2
0.100 GeneticVariation disease BEFREE In the process of analyzing TCR alpha rearrangements in a patient with adult T-cell leukemia (ATL) carrying a translocation at chromosome 14q11, we found novel complex rearrangements in the Jalpha locus. 11776383 2001
Entrez Id: 6900
Gene Symbol: CNTN2
CNTN2
0.100 GeneticVariation disease BEFREE Our data may provide the prospect of the gene therapy for ATL by tax-targeted selective elimination of leukemic cells. 7919376 1994
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.100 GeneticVariation disease BEFREE We also examined deletion of cyclin-dependent kinase inhibitor 4 (INK4) genes and mutation of p53 gene in combination with changes in the HTLV-I genome in acute type ATL to test whether host genetic changes promoted the malignant transformation of ATL cells that carry putative CTL escape mutations. 16052518 2006
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.100 GeneticVariation disease BEFREE Homozygous deletions of MTAP and p16 genes were detected respectively in six (20.7%) and eight (27.6%) of 29 ATL samples and in 15 (38.5%) and 23 (59%) of 39 T-ALL samples. 10803528 2000
Entrez Id: 110006328
Gene Symbol: ERVK-32
ERVK-32
0.100 GeneticVariation disease BEFREE We did not find changes in the env gene that correlated with HTLV-I-associated neurological disease vs adult T cell leukemia or with the nervous system vs peripheral blood and lymphoid organs. 8778566 1995
Entrez Id: 55729
Gene Symbol: ATF7IP
ATF7IP
0.100 GeneticVariation disease BEFREE On this ground, the present study suggests that such conditions may enhance the risk for ATL and TSP-HAM in HTLV-1 carriers by increasing the Tax-induced NF-kappaB activation. 18425496 2008
Entrez Id: 55729
Gene Symbol: ATF7IP
ATF7IP
0.100 GeneticVariation disease BEFREE We detected defective proviruses with large internal deletions in PBMC from ATLL and HAM/TSP patients and in asymptomatic HTLV-1 carriers. 10756004 2000
Entrez Id: 55729
Gene Symbol: ATF7IP
ATF7IP
0.100 GeneticVariation disease BEFREE Human T cell lymphotropic virus type I (HTLV-I) infection in India has been found to be associated with adult T cell leukaemia/lymphoma (ATLL) and HTLV-I-associated myelopathy/tropical spastic paraparesis (HAM/TSP) among life-long residents of southern India. 8277290 1993