Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 4312
Gene Symbol: MMP1
MMP1
0.900 AlteredExpression disease BEFREE The up-regulation of MMP1 and MMP9 was the main change associated with COPD. 20970515 2011
Entrez Id: 4312
Gene Symbol: MMP1
MMP1
0.900 GeneticVariation disease BEFREE Polymorphisms in MMP2 and MMP9 but not in MMP1 and MMP12 are associated with the risk of COPD in the Mexican mestizo population. 26439471 2015
Entrez Id: 4312
Gene Symbol: MMP1
MMP1
0.900 Biomarker disease BEFREE In contrast, 8/12 genes (early growth response factor 1, MMP1, MMP9, MMP10, plasminogen activator urokinase, plasminogen activator urokinase receptor, tumor necrosis factor, and IL13) increased and 4/12 (MMP2, tissue inhibitor of matrix metalloproteinase-1, collagen 1alpha1, and transforming growth factor-beta3) decreased in the surrounding lung tissue in association with progression of COPD. 20075389 2010
Entrez Id: 4312
Gene Symbol: MMP1
MMP1
0.900 Biomarker disease BEFREE SIRT1 redresses the imbalance of tissue inhibitor of matrix metalloproteinase-1 and matrix metalloproteinase-9 in the development of mouse emphysema and human COPD. 24039251 2013
Entrez Id: 4312
Gene Symbol: MMP1
MMP1
0.900 GeneticVariation disease BEFREE In this report, we performed Meta analysis to investigate the association between four kinds of MMP single nucleotide polymorphisms (SNP, MMP1 -1607 1G/2G, MMP3 -1171 5A/6A, MMP9 -1562 C/T, MMP12 -82 A/G) and COPD risk from 21 studies including 4184 cases and 5716 controls. 24085258 2013
Entrez Id: 4312
Gene Symbol: MMP1
MMP1
0.900 GeneticVariation disease BEFREE Polymorphisms in MMP1 were not consistently associated with prevalent COPD or incident NSCLC nor with survival in NSCLC. 22993337 2012
Entrez Id: 4312
Gene Symbol: MMP1
MMP1
0.900 GeneticVariation disease BEFREE Here we review evidence that genetic polymorphisms in matrix metalloproteinase genes MMP1, MMP9 and MMP12 may be important in the development of COPD. 12383023 2002
Entrez Id: 4312
Gene Symbol: MMP1
MMP1
0.900 GeneticVariation disease BEFREE When stratified by ethnicity, results indicated MMP-1 -1607G/GG (recessive model: G/G vs G/GG+GG/GG; OR: 1.20; 95% CI: 1.01-1.44; p = 0.04) and MMP-9 -1562 C/T (dominant model; OR: 1.66; 95% CI: 1.01-2.71; p = 0.04) were correlated with COPD susceptibility among Caucasians and Asians respectively. 23555986 2013
Entrez Id: 4312
Gene Symbol: MMP1
MMP1
0.900 GeneticVariation disease BEFREE We also found that the chronic obstructive pulmonary disease (COPD)-predisposing TRPV4P19S variant enhances Ca2+ influx and MMP 1 activation, providing mechanistic linkage between man-made air pollution and human airway disease. 21245013 2011
Entrez Id: 4312
Gene Symbol: MMP1
MMP1
0.900 GeneticVariation disease BEFREE However, MMP-1 rs1799750 1G > 2G and MMP-3 rs3025058 5A > 6A were not associated with COPD risk (all P > 0.05). 27173221 2016
Entrez Id: 4312
Gene Symbol: MMP1
MMP1
0.900 GeneticVariation disease BEFREE No significant associations were found between genetic variations in MMP-1 and MMP-2 variants and the risk of development of COPD. 27412345 2016
Entrez Id: 4312
Gene Symbol: MMP1
MMP1
0.900 AlteredExpression disease BEFREE TLR4 protein contributes to cigarette smoke-induced matrix metalloproteinase-1 (MMP-1) expression in chronic obstructive pulmonary disease. 21730072 2011
Entrez Id: 4312
Gene Symbol: MMP1
MMP1
0.900 Biomarker disease BEFREE Serum levels of MMP-1,-7,-10-12 were significantly influenced by smoking, and MMP-1, -3, -7 and-12 were elevated in subjects with COPD and carotid plaque. 30789935 2019
Entrez Id: 4312
Gene Symbol: MMP1
MMP1
0.900 GeneticVariation disease BEFREE To investigate the association of 3 polymorphisms of MMP genes (MMP-1 -1607G-->GG, MMP-9 -1562C-->T and MMP-12 N357S), which have been reported to be associated with COPD-related phenotypes, with the risk of COPD in a Korean population. 20160424 2010
Entrez Id: 3162
Gene Symbol: HMOX1
HMOX1
0.700 GeneticVariation disease BEFREE Heme oxygenase-1 (HO-1) plays a protective role as an antioxidant in the lung, and HO-1 gene promoter polymorphism has been shown to be associated with the severity and prognosis of COPD patients. 26674585 2015
Entrez Id: 3162
Gene Symbol: HMOX1
HMOX1
0.700 Biomarker disease BEFREE Consequently, heme oxygenase-1 (HO-1), superoxide dismutase (SOD), catalase (CAT), glutathione S-transferase (GST), microsomal epoxide hydrolase (EPHX1), and cytochrome P450 (CYP) genetic polymorphisms may have an important role in COPD pathogenesis. 21721950 2011
Entrez Id: 6441
Gene Symbol: SFTPD
SFTPD
0.700 GeneticVariation disease BEFREE Carriers of the SFTPD AG and AA polymorphic genotypes constituted 71.4 % of COPD patients versus 48 % in asymptomatic smokers, with a statistically significant difference between the two groups (p = 0.049). 24504887 2014
Entrez Id: 6441
Gene Symbol: SFTPD
SFTPD
0.700 Biomarker disease BEFREE SP-D has been implicated in the development of respiratory diseases including respiratory distress syndrome, bronchopulmonary dysplasia, allergic asthma, and chronic obstructive pulmonary disease. 29473039 2018
Entrez Id: 6441
Gene Symbol: SFTPD
SFTPD
0.700 GeneticVariation disease BEFREE In the NETT-NAS case-control analysis, four SFTPD SNPs were associated with susceptibility to COPD: rs2245121 (P = 0.01), rs911887 (P = 0.006), rs6413520 (P = 0.004), and rs721917 (P = 0.006). 20448057 2011
Entrez Id: 3162
Gene Symbol: HMOX1
HMOX1
0.700 GeneticVariation disease BEFREE Heme oxygenase-1 polymorphism associated with severity of chronic obstructive pulmonary disease. 17254481 2007
Entrez Id: 6441
Gene Symbol: SFTPD
SFTPD
0.700 GeneticVariation disease BEFREE Genotype analysis of surfactant protein (SP)-A, SP-B, SP-B-linked microsatellite, and SP-D marker alleles was performed in patients with COPD (n=97) and smoker (n=82) or nonsmoker (n=99) controls. 11589345 2001
Entrez Id: 3162
Gene Symbol: HMOX1
HMOX1
0.700 GeneticVariation disease BEFREE We compared the genotype frequencies of 12 polymorphisms in seven detoxification-related genes (GSTM1, GSTT1, GSTP1 exon 5, CYP1A1 exon 7, CYP1A1 3'-flanking, CYP2E1 intron 6, CYP2E1 5'-flanking, EPHX1 exon 3, EPHX1 exon 4 and HMOX1 promoter) and the hypoxia-related HIF1A (C1772T and G1790A) genes between 48 Japanese patients with work-related COPD who had a working history in a poison gas factory during World War II and two control groups (n=172 and 110 subjects, respectively). 21651746 2013
Entrez Id: 6441
Gene Symbol: SFTPD
SFTPD
0.700 GeneticVariation disease BEFREE Some of these pQTLs [e.g., pQTLs for VDBP, sRAGE (gene = AGER), surfactant protein D (gene = SFTPD), and TNFRSF10C] have been previously associated with COPD phenotypes. 27532455 2016
Entrez Id: 3162
Gene Symbol: HMOX1
HMOX1
0.700 AlteredExpression disease BEFREE The HO-1, NF-κB and 8-OHdG were found highly expressed in COPD rat lung, particularly at the higher PM<sub>2.5</sub> dose of cold stress groups, while Nrf2 was found declined. 29793105 2018
Entrez Id: 3162
Gene Symbol: HMOX1
HMOX1
0.700 Biomarker disease BEFREE Lung protection by heme oxygenase-1 or its enzymatic reaction products has been demonstrated in vitro and in vivo in a number of pulmonary disease models, including acute lung injury, cigarette smoke-induced lung injury/chronic obstructive pulmonary disease, interstitial lung diseases, ischemia/reperfusion injury, and asthma/airway inflammation. 17845132 2007