Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 309
Gene Symbol: ANXA6
ANXA6
0.020 Biomarker disease BEFREE Finally, we have shown that T-cell nuclear proteins which bind the E3 motif bear p70 (Ku) lupus autoantigenic determinants. 8464876 1993
Entrez Id: 3117
Gene Symbol: HLA-DQA1
HLA-DQA1
0.010 GeneticVariation disease BEFREE While patients with anti-RNP precipitin showed an increased frequency of the DQw8-associated allele DQB1*0302 (P = 0.02, OR = 3.7) compared with normal controls, as well as an increased frequency of the DQw5-associated alleles DQA1*0101 and DQB1*0501 (P = 0.05, OR = 4.2) compared with lupus patients without anti-Sm or RNP. 7678744 1993
Entrez Id: 10950
Gene Symbol: BTG3
BTG3
0.030 Biomarker disease BEFREE Both anti-MPO and ANA were found in sera from patients with drug-induced lupus. 8162472 1994
Entrez Id: 3586
Gene Symbol: IL10
IL10
0.100 AlteredExpression disease BEFREE We demonstrate herein that the accelerated development of lupus-like autoimmune disease in MRL-lpr/lpr and MRL.Yaa mice, as compared with MRL-lpr/lpr.ll and MRL-+/+ mice, respectively, was correlated with an enhanced expression of IFN-gamma vs IL-4 and IL-10 mRNA in CD4+ T cells, which paralleled with an increase of spontaneous and foreign T cell-dependent antigen-induced productions of IgG2a and IgG3 vs IgG1 antibodies. 8601623 1996
Entrez Id: 959
Gene Symbol: CD40LG
CD40LG
0.100 Biomarker disease BEFREE Anti-CD40 ligand antibody treatment prevents the development of lupus-like nephritis in a subset of New Zealand black x New Zealand white mice. Response correlates with the absence of an anti-antibody response. 8816428 1996
Entrez Id: 3565
Gene Symbol: IL4
IL4
0.040 AlteredExpression disease BEFREE We demonstrate herein that the accelerated development of lupus-like autoimmune disease in MRL-lpr/lpr and MRL.Yaa mice, as compared with MRL-lpr/lpr.ll and MRL-+/+ mice, respectively, was correlated with an enhanced expression of IFN-gamma vs IL-4 and IL-10 mRNA in CD4+ T cells, which paralleled with an increase of spontaneous and foreign T cell-dependent antigen-induced productions of IgG2a and IgG3 vs IgG1 antibodies. 8601623 1996
Entrez Id: 2694
Gene Symbol: CBLIF
CBLIF
0.030 AlteredExpression disease BEFREE To investigate the respective roles of Th1 and Th2 cells in the pathogenesis of lupus-like autoimmune disease, we have analyzed the spontaneous and antigen-induced productions of IgG1 vs IgG2a and IgG3 subclasses in relation to the mRNA expression of INF-gamma (Th1 cytokine promoting IgG2a and IgG3 production), IL-4 (Th2 cytokine promoting IgG1 production), and IL-10 (Th2 cytokine) in CD4+ T cells from lupus-prone MRL mice. 8601623 1996
Entrez Id: 3502
Gene Symbol: IGHG3
IGHG3
0.030 AlteredExpression disease BEFREE We demonstrate herein that the accelerated development of lupus-like autoimmune disease in MRL-lpr/lpr and MRL.Yaa mice, as compared with MRL-lpr/lpr.ll and MRL-+/+ mice, respectively, was correlated with an enhanced expression of IFN-gamma vs IL-4 and IL-10 mRNA in CD4+ T cells, which paralleled with an increase of spontaneous and foreign T cell-dependent antigen-induced productions of IgG2a and IgG3 vs IgG1 antibodies. 8601623 1996
Entrez Id: 302
Gene Symbol: ANXA2
ANXA2
0.010 Biomarker disease BEFREE These results show that p36 is a new interferon-alpha-induced protein that localizes in the endoplasmic reticulum, the cell region in which the lupus inclusions form, and that p36 is probably physically associated with the lupus inclusions. 8557639 1996
Entrez Id: 4331
Gene Symbol: MNAT1
MNAT1
0.010 Biomarker disease BEFREE These results show that p36 is a new interferon-alpha-induced protein that localizes in the endoplasmic reticulum, the cell region in which the lupus inclusions form, and that p36 is probably physically associated with the lupus inclusions. 8557639 1996
Entrez Id: 100289545
Gene Symbol: H3C9P
H3C9P
0.010 Biomarker disease BEFREE These results show that p36 is a new interferon-alpha-induced protein that localizes in the endoplasmic reticulum, the cell region in which the lupus inclusions form, and that p36 is probably physically associated with the lupus inclusions. 8557639 1996
Entrez Id: 26227
Gene Symbol: PHGDH
PHGDH
0.010 Biomarker disease BEFREE The 16-mer Ki peptide containing the sequence homologous to the SV40 T NLS is one of the antigenic epitopes recognized by anti-Ki antibodies in lupus sera. 8639183 1996
Entrez Id: 51251
Gene Symbol: NT5C3A
NT5C3A
0.010 Biomarker disease BEFREE These results show that p36 is a new interferon-alpha-induced protein that localizes in the endoplasmic reticulum, the cell region in which the lupus inclusions form, and that p36 is probably physically associated with the lupus inclusions. 8557639 1996
Entrez Id: 6962
Gene Symbol: TRBV20OR9-2
TRBV20OR9-2
0.060 Biomarker disease BEFREE The analysis of the beta chain of the TCR revealed little clonotypic T cell expansion in the peripheral blood of lupus patients in remission, whereas in patients with active disease many dominant T cell clonal expansions without any distinct V beta bias were observed. 9138015 1997
Entrez Id: 2153
Gene Symbol: F5
F5
0.030 Biomarker disease BEFREE This reduction in APC-R ratio was not explained by (1) the presence of the factor V Leiden, found in only one of 165 patients with SS disease including those tested for APC-R, or (2) the presence of lupus anticoagulants. 9074431 1997
Entrez Id: 10475
Gene Symbol: TRIM38
TRIM38
0.010 Biomarker disease BEFREE Besides the novel MHC class 1-like HH candidate gene HLA-H, we identified a family of five butyrophilin-related sequences, two genes with structural similarity to a type 1 sodium phosphate transporter, 12 novel histone genes, and a gene we named RoRet based on its strong similarity to the 52-kD Ro/SSA lupus and Sjogren's syndrome auto-antigen and the RET finger protein. 9149941 1997
Entrez Id: 3136
Gene Symbol: HLA-H
HLA-H
0.010 GeneticVariation disease BEFREE Besides the novel MHC class 1-like HH candidate gene HLA-H, we identified a family of five butyrophilin-related sequences, two genes with structural similarity to a type 1 sodium phosphate transporter, 12 novel histone genes, and a gene we named RoRet based on its strong similarity to the 52-kD Ro/SSA lupus and Sjogren's syndrome auto-antigen and the RET finger protein. 9149941 1997
Entrez Id: 3586
Gene Symbol: IL10
IL10
0.100 Biomarker disease BEFREE Universally binding nucleosomal epitopes are productively recognized by autoreactive T cells by binding to the T-cell receptor-alpha chain; (b) circulating T cells from patients with lupus commonly display a deficiency of the T-cell receptor zeta chain, and upon ligation of their cell-surface antigen receptor overproduce tyrosine phosphorylated proteins; (c) lupus and lupus nephritis are associated with a low-binding FcgammaRIIIA (CD16) polymorphism that crosses ethnic barriers; (d) the pathogenetic role of the cytokine interleukin-10 is expanding, because it is reportedly overproduced not only by cells from lupus patients but also by cells from their healthy relatives, and its overproduction in vitro is correlated with increased apoptotic cell death and with lymphopenia. 9746856 1998
Entrez Id: 2099
Gene Symbol: ESR1
ESR1
0.080 AlteredExpression disease BEFREE Peripheral blood T cells and monocytes and B cell lines derived from patients with lupus express estrogen receptor transcripts similar to those of normal cells. 9676761 1998
Entrez Id: 1493
Gene Symbol: CTLA4
CTLA4
0.060 AlteredExpression disease BEFREE But patients with SLE had significantly increased percentages of CTLA-4-positive T cells compared with normal controls, implying at least that there was no apparent defective expression of CTLA-4 molecule in human lupus. 9857283 1998
Entrez Id: 6962
Gene Symbol: TRBV20OR9-2
TRBV20OR9-2
0.060 Biomarker disease BEFREE The lupus TCR-alpha chains probably contact the nucleosomal peptide complexed with MHC with relatively high affinity/avidity to sustain TCR signaling, because CD4 coreceptor was not required for promiscuous recognition. 9449717 1998
Entrez Id: 1636
Gene Symbol: ACE
ACE
0.050 GeneticVariation disease BEFREE ACE insertion polymorphism might be used as one of predictive factors for the activity of lupus. 9863894 1998
Entrez Id: 2214
Gene Symbol: FCGR3A
FCGR3A
0.050 GeneticVariation disease BEFREE Universally binding nucleosomal epitopes are productively recognized by autoreactive T cells by binding to the T-cell receptor-alpha chain; (b) circulating T cells from patients with lupus commonly display a deficiency of the T-cell receptor zeta chain, and upon ligation of their cell-surface antigen receptor overproduce tyrosine phosphorylated proteins; (c) lupus and lupus nephritis are associated with a low-binding FcgammaRIIIA (CD16) polymorphism that crosses ethnic barriers; (d) the pathogenetic role of the cytokine interleukin-10 is expanding, because it is reportedly overproduced not only by cells from lupus patients but also by cells from their healthy relatives, and its overproduction in vitro is correlated with increased apoptotic cell death and with lymphopenia. 9746856 1998
Entrez Id: 2152
Gene Symbol: F3
F3
0.030 AlteredExpression disease BEFREE The induction of PAI-1 and TF, and the decrease in u-PA expression in the kidneys of lupus-prone or of endotoxemic mice may promote the formation of renal microthrombi and thus contribute to the progression of renal damage in these models. 9701458 1998
Entrez Id: 4512
Gene Symbol: COX1
COX1
0.010 Biomarker disease BEFREE Immunoperoxidase studies on kidney biopsies showed COX-1 staining in glomerular arterioles and other renal vessels, with no evident difference between lupus biopsies and control specimens taken from either individuals who were free of renal disease or patients with non-lupus nephropathies. 9644630 1998