Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 2200
Gene Symbol: FBN1
FBN1
0.010 Biomarker disease BEFREE Serious renal pathological changes, mass proteinuria, higher SLEDAI, higher prednisone dose, and a decline in CD4+ T cells could be risk factors for CM in patients with LN. 31838635 2020
Entrez Id: 84618
Gene Symbol: NT5C1A
NT5C1A
0.010 Biomarker disease BEFREE While calcineurin inhibitor (CNI) and immunosuppressive drugs have improved the survival rate, post-transplant recurrence of lupus nephritis from surveillance-biopsy proven lupus nephritis range from 30% to 44%. 31767117 2020
Entrez Id: 1822
Gene Symbol: ATN1
ATN1
0.010 Biomarker disease BEFREE Abbreviations: ALB: albumin; ARHGDIB: Rho GDP dissociation inhibitor beta; APOL1: apolipoprotein L1; ATG5: autophagy related 5; ATG7: autophagy related 7; ATG16L2: autophagy related 16 like 2; BECN1: beclin 1; CDKN1B: cyclin dependent kinase inhibitor 1B; CLEC16A, C-type lectin domain containing 16A; CYBB: cytochrome b-245 beta chain; DC: dendritic cell; DRAM1: DNA damage regulated autophagy modulator 1; eQTL: expression quantitative trait loci; GWAS: genome-wide association study; IFNA: interferon alpha; IRGM: immunity related GTPase M; LRRK2: leucine rich repeat kinase 2; MAP1LC3B: microtubule associated protein 1 light chain 3 beta; MTMR3: myotubularin related protein 3; LAP" LC3-associated phagocytosis; LN: lupus nephritis; NOD: non-obese diabetic; NPHS2: NPHS2, podocin; PBMC: peripheral blood mononuclear cell; RUBCN: rubicon autophagy regulator; SLE: systemic lupus erythematosus. 30755075 2019
Entrez Id: 2131
Gene Symbol: EXT1
EXT1
0.010 GeneticVariation disease BEFREE In the validation cohort, we confirmed that EXT1/EXT2 staining was detected in pure class 5 lupus nephritis (eight of 18 patients) and in presumed primary MN associated with signs of autoimmunity (three of 16 patients); only one of the 14 cases of mixed class 5 and 3/4 lupus nephritis was positive for EXT1/EXT2. 31061139 2019
Entrez Id: 406943
Gene Symbol: MIR152
MIR152
0.010 AlteredExpression disease BEFREE There was an inverse correlation between miR-152 expression in LN tissue and clinical parameters like 24 h urine protein excretion levels and serum creatinine, but not serum complement levels or SLEDAI. 30787934 2019
Entrez Id: 64806
Gene Symbol: IL25
IL25
0.010 AlteredExpression disease BEFREE Thus, the aim of this research is to determine the plasma levels of IL-25 and Th2-associated cytokines (IL-4, IL-5, IL-6, IL-9, IL-10, IL-13) in SLE patients with (SLE-LN) and without lupus nephritis. 31697750 2019
Entrez Id: 7132
Gene Symbol: TNFRSF1A
TNFRSF1A
0.010 AlteredExpression disease BEFREE Soluble TNF-R1, VEGF and other cytokines as markers of disease activity in systemic lupus erythematosus and lupus nephritis. 31046570 2019
Entrez Id: 2132
Gene Symbol: EXT2
EXT2
0.010 Biomarker disease BEFREE In the validation cohort, we confirmed that EXT1/EXT2 staining was detected in pure class 5 lupus nephritis (eight of 18 patients) and in presumed primary MN associated with signs of autoimmunity (three of 16 patients); only one of the 14 cases of mixed class 5 and 3/4 lupus nephritis was positive for EXT1/EXT2. 31061139 2019
Entrez Id: 8829
Gene Symbol: NRP1
NRP1
0.010 AlteredExpression disease BEFREE Our results show that patients with active LN have increased levels of urinary NRP-1. 31533337 2019
Entrez Id: 191
Gene Symbol: AHCY
AHCY
0.010 AlteredExpression disease BEFREE DZ2002 is a reversible S-adenosyl-L-homocysteine hydrolase (SAHH) inhibitor with potent therapeutic activity against lupus nephritis in mice. 30696480 2019
Entrez Id: 406910
Gene Symbol: MIR125A
MIR125A
0.010 AlteredExpression disease BEFREE Aim of the study was to evaluate the function of miR-125a-3p and its effect on regulation of fibrosis and interleukin (IL)-17 in LN. 30972208 2019
Entrez Id: 3135
Gene Symbol: HLA-G
HLA-G
0.010 Biomarker disease BEFREE HLA-G staining was observed in the glomeruli of 20 of 30 samples from patients with LN. 31291846 2019
Entrez Id: 23569
Gene Symbol: PADI4
PADI4
0.010 GeneticVariation disease BEFREE Here, we investigate whether SNPs in PADI4 influence the risk of SLE or LN. 30269634 2019
Entrez Id: 406959
Gene Symbol: MIR183
MIR183
0.010 Biomarker disease BEFREE MiR-183 delivery attenuates murine lupus nephritis-related injuries via targeting mTOR. 31325389 2019
Entrez Id: 5698
Gene Symbol: PSMB9
PSMB9
0.010 AlteredExpression disease BEFREE Bioinformatics and immunohistological analyses of clinical samples have correlated lower expression of REGγ with enhanced expression of phosphorylated STAT3, LMP2 and LMP7 in human Lupus Nephritis. 31171475 2019
Entrez Id: 4745
Gene Symbol: NELL1
NELL1
0.010 Biomarker disease BEFREE NRP-1 is increased in kidney biopsies of LN. 31533337 2019
Entrez Id: 7035
Gene Symbol: TFPI
TFPI
0.010 AlteredExpression disease BEFREE Although urinary d-dimer, plasmin, TF, and TFPI were all elevated in active LN compared to all control groups, and correlated with rSLEDAI and SLICC RAS disease activity indices, urine plasmin emerged as the strongest independent predictor of eGFR and renal disease status, by multivariate regression analysis and Bayesian network analysis. 31319876 2019
Entrez Id: 1906
Gene Symbol: EDN1
EDN1
0.010 Biomarker disease BEFREE In conclusion, the pathological glomerular endothelial cell lesions were associated with FPW and the VEGF-endothelin-1 system might play a critical role in the endothelial cell-podocyte crosstalk in LN. 30755145 2019
Entrez Id: 7939
Gene Symbol: LAP
LAP
0.010 GeneticVariation disease BEFREE Abbreviations: ALB: albumin; ARHGDIB: Rho GDP dissociation inhibitor beta; APOL1: apolipoprotein L1; ATG5: autophagy related 5; ATG7: autophagy related 7; ATG16L2: autophagy related 16 like 2; BECN1: beclin 1; CDKN1B: cyclin dependent kinase inhibitor 1B; CLEC16A, C-type lectin domain containing 16A; CYBB: cytochrome b-245 beta chain; DC: dendritic cell; DRAM1: DNA damage regulated autophagy modulator 1; eQTL: expression quantitative trait loci; GWAS: genome-wide association study; IFNA: interferon alpha; IRGM: immunity related GTPase M; LRRK2: leucine rich repeat kinase 2; MAP1LC3B: microtubule associated protein 1 light chain 3 beta; MTMR3: myotubularin related protein 3; LAP" LC3-associated phagocytosis; LN: lupus nephritis; NOD: non-obese diabetic; NPHS2: NPHS2, podocin; PBMC: peripheral blood mononuclear cell; RUBCN: rubicon autophagy regulator; SLE: systemic lupus erythematosus. 30755075 2019
Entrez Id: 51704
Gene Symbol: GPRC5B
GPRC5B
0.010 AlteredExpression disease BEFREE We identified an orphan GPCR, Gprc5b, as a novel gene highly enriched in podocytes that was significantly upregulated in common human glomerulopathies, including diabetic nephropathy, IgA nephropathy, and lupus nephritis. 31285284 2019
Entrez Id: 8408
Gene Symbol: ULK1
ULK1
0.010 AlteredExpression disease BEFREE Moreover, the percentage of marker expression in LN types III, IV and V-IV were significantly higher than controls (p < 0.05), while that in types II and V were lower than controls, although the difference for LC3 and ULK1 was not statistically significant. 31014158 2019
Entrez Id: 120892
Gene Symbol: LRRK2
LRRK2
0.010 Biomarker disease BEFREE Abbreviations: ALB: albumin; ARHGDIB: Rho GDP dissociation inhibitor beta; APOL1: apolipoprotein L1; ATG5: autophagy related 5; ATG7: autophagy related 7; ATG16L2: autophagy related 16 like 2; BECN1: beclin 1; CDKN1B: cyclin dependent kinase inhibitor 1B; CLEC16A, C-type lectin domain containing 16A; CYBB: cytochrome b-245 beta chain; DC: dendritic cell; DRAM1: DNA damage regulated autophagy modulator 1; eQTL: expression quantitative trait loci; GWAS: genome-wide association study; IFNA: interferon alpha; IRGM: immunity related GTPase M; LRRK2: leucine rich repeat kinase 2; MAP1LC3B: microtubule associated protein 1 light chain 3 beta; MTMR3: myotubularin related protein 3; LAP" LC3-associated phagocytosis; LN: lupus nephritis; NOD: non-obese diabetic; NPHS2: NPHS2, podocin; PBMC: peripheral blood mononuclear cell; RUBCN: rubicon autophagy regulator; SLE: systemic lupus erythematosus. 30755075 2019
Entrez Id: 1493
Gene Symbol: CTLA4
CTLA4
0.010 Biomarker disease BEFREE Along with the increasing variants, these nsSNVs' effects on the interaction of CTLA-4 with CD80/CD86 will increase, and thus influence the CTLA-4-Ig treatment efficacy against LN. 30928350 2019
Entrez Id: 22861
Gene Symbol: NLRP1
NLRP1
0.010 AlteredExpression disease BEFREE NLRP1 was mainly expressed in tubular cells of LN class II and class IV while NLRP3 was expressed in tubular cells of LN class IV. 31694740 2019
Entrez Id: 9255
Gene Symbol: AIMP1
AIMP1
0.010 Biomarker disease BEFREE These results suggest that treatment targeting AIMP1 could be a novel and highly immune-modulating therapeutic strategy in lupus nephritis. 31394431 2019