Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 5243
Gene Symbol: ABCB1
ABCB1
0.010 Biomarker disease BEFREE Immunohistochemically, MDR1 positive cells were localized in the germinal centers of RL and center of the nodular lesions of FL showing associations with CD21 positive follicular dendritic cells (FDCs). 23339364 2013
Entrez Id: 10058
Gene Symbol: ABCB6
ABCB6
0.010 Biomarker disease BEFREE Paraffin-embedded nodal follicular lymphomas (n = 37) were subjected to bcl-2 and p53 immunohistochemistry on tissue sections using a three-step ABC system. 9349233 1997
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.010 Biomarker disease BEFREE Oligonucleotide sets that probe breakpoints of <i>IGH-BCL2</i> (immunoglobulin heavy-apoptosis regulator) in follicular lymphoma (FL), <i>MYC-IGH</i> (MYC proto-oncogene, bHLH transcription factor-immunoglobulin heavy) in Burkitt lymphoma (BL) and <i>BCR-ABL1</i> (RhoGEF and GTPase activating protein-ABL proto-oncogene 1, non-receptor tyrosine kinase) in chronic myelogenous leukemia (CML) were designed. 28515100 2017
Entrez Id: 27
Gene Symbol: ABL2
ABL2
0.010 AlteredExpression disease BEFREE In this study we evaluated ARG protein expression in Follicular Lymphoma (FL), Burkitt's Lymphoma (BL) and Diffused Large B Cell Lymphoma (DLBCL) in comparison with non-neoplastic lymph nodes. 19604504 2009
Entrez Id: 94
Gene Symbol: ACVRL1
ACVRL1
0.010 AlteredExpression disease BEFREE 9p24 gains were detected in 6/17 (35%) primary mediastinal B-cell lymphomas (PMBCLs), 25/77 (33%) Hodgkin's lymphomas (HLs), 3/16 (19%) angioimmunoblastic T-cell lymphomas (AILTs) and 1/5 ALK1(+) anaplastic large cell lymphomas (ALCLs); breaks were observed only in three cases. pJAK2 expression was most prevalent in PMBCL, peripheral T-cell lymphomas and HL. pSTAT3 predominated in ALCLs, HLs, AILTs, PMBCLs and peripheral T-cell lymphomas. pSTAT5 expression was detected frequently in follicular lymphomas, diffuse large B-cell lymphomas and AILTs. 19136931 2009
Entrez Id: 6868
Gene Symbol: ADAM17
ADAM17
0.010 GeneticVariation disease BEFREE Over a median follow-up of 89 months with 65 deaths in this preliminary study, we identified 5 gene regions (BMP7, GALNT12,DUSP2, GADD45B, and ADAM17) that were associated with overall survival from FL. 22473939 2012
Entrez Id: 3899
Gene Symbol: AFF3
AFF3
0.010 GeneticVariation disease BEFREE A novel fusion 5'AFF3/3'BCL2 originated from a t(2;18)(q11.2;q21.33) translocation in follicular lymphoma. 18622426 2008
Entrez Id: 3899
Gene Symbol: AFF3
AFF3
0.010 GeneticVariation disease LHGDN We report a follicular lymphoma case showing BCL2 overexpression, detected by immunohistochemistry and real-time quantitative PCR, consequently to the formation of a novel fusion gene between the 5' of the lymphoid nuclear transcriptional activator gene AFF3 at 2q11.2, and the 3' of BCL2. 18622426 2008
Entrez Id: 57379
Gene Symbol: AICDA
AICDA
0.100 PosttranslationalModification disease BEFREE One factor implicated in active generation of cytosine methylation heterogeneity is activation-induced cytidine deaminase, which mediates DNA methylation changes and introduces epigenetic heterogeneity in normal germinal center B cells, the cells of origin of mature B-cell neoplasms such as diffuse large B-cell lymphoma and follicular lymphoma. 28375986 2017
Entrez Id: 57379
Gene Symbol: AICDA
AICDA
0.100 AlteredExpression disease BEFREE Switch-off or low expression of AID after c-myc amplification may correlate with the clinical outcomes of FL. 22168746 2012
Entrez Id: 57379
Gene Symbol: AICDA
AICDA
0.100 Biomarker disease BEFREE To characterize PCFL and PCMZL more clearly and to define criteria helpful for the differential diagnosis, we compared expression of immunohistochemical markers [LIM-only transcription factor 2 (LMO2), human germinal centre-associated lymphoma (HGAL), stathmin 1 (STMN1), activation-induced cytidine deaminase (AID), myeloid cell nuclear differentiation antigen (MNDA)] and the presence of cytogenetic abnormalities described previously in nodal follicular lymphoma [B cell lymphoma 2 (BCL2) and BCL6 breaks, 1p36 chromosomal region deletion (del 1p36)] in a series of 48 cutaneous follicular and marginal zone lymphomas [cutaneous follicular lymphoma (CFL) and cutaneous marginal zone lymphoma (CMZL)]. 28594133 2017
Entrez Id: 57379
Gene Symbol: AICDA
AICDA
0.100 AlteredExpression disease BEFREE Although, BCL-2 protein overexpression is considered to be a critical pathogenic event in the development of follicular lymphoma, our findings suggest that follicular lymphomas with the same morphology, immunophenotype, mutational pattern and activation-induced cytidine deaminase expression may develop without the involvement of BCL-2 gene. 18945749 2008
Entrez Id: 57379
Gene Symbol: AICDA
AICDA
0.100 Biomarker disease BEFREE Our results unveil two manifest biological subgroups of FL and indicate that the specific dissociation between AID and SHM after isotype switch may correlate with the clinical outcome of this heterogeneous disease. 25860234 2016
Entrez Id: 57379
Gene Symbol: AICDA
AICDA
0.100 Biomarker disease BEFREE The distribution of coding mutations in driver genes and the correlation with SHM suggest CREBBP and AID to be potential modifiers of genetic and epigenetic co-evolution in FL. 25027518 2015
Entrez Id: 57379
Gene Symbol: AICDA
AICDA
0.100 Biomarker disease BEFREE Interestingly, in two of seven follicular lymphomas with clinical and histological progression, selective outgrowth of AID-expressing clones occurred, suggestive for a role of the somatic diversification machinery in lymphoma transformation. 12873980 2003
Entrez Id: 57379
Gene Symbol: AICDA
AICDA
0.100 AlteredExpression disease BEFREE In a survey of human B-NHL AID was found to be constitutively expressed in follicular lymphoma and in diffuse large B-cell lymphoma but to be absent in B-precursor lymphoblastic leukemia, in mantle cell lymphoma, and in plasma cell myeloma. 12511417 2003
Entrez Id: 57379
Gene Symbol: AICDA
AICDA
0.100 GeneticVariation disease BEFREE These results suggest that genomic instability that allows for emergence of distinct mutations through AID activity underlies development of the high-risk FL phenotype. 29070849 2017
Entrez Id: 57379
Gene Symbol: AICDA
AICDA
0.100 Biomarker disease BEFREE The ongoing mutation was significantly different between AID-positive and AID-negative FL fresh cells (unpaired Student's t-test, P=0.047). 14990977 2004
Entrez Id: 57379
Gene Symbol: AICDA
AICDA
0.100 Biomarker disease BEFREE Duodenal and nodal follicular lymphomas are distinct: the former lacks activation-induced cytidine deaminase and follicular dendritic cells despite ongoing somatic hypermutations. 19396151 2009
Entrez Id: 57379
Gene Symbol: AICDA
AICDA
0.100 AlteredExpression disease BEFREE The AID gene was preferentially expressed in B cell lymphoma in particular in diffuse large B cell lymphoma and follicular lymphoma. 26077666 2016
Entrez Id: 57379
Gene Symbol: AICDA
AICDA
0.100 AlteredExpression disease BEFREE Duodenal-type FL lacks the activation-induced cytidine deaminase (AID) expression observed in nodal ones, although this may be compensated for by BTB domain and CNC homolog 2. 30456840 2018
Entrez Id: 57379
Gene Symbol: AICDA
AICDA
0.100 AlteredExpression disease LHGDN The ongoing mutation was significantly different between AID-positive and AID-negative FL fresh cells (unpaired Student's t-test, P=0.047). 14990977 2004
Entrez Id: 199
Gene Symbol: AIF1
AIF1
0.010 GeneticVariation disease BEFREE Accordingly, SNPs in RING1/RXRB (rs2855429), AIF1 (rs2857597), and BAT4 (rs3115667) were associated with NHL (P-trends ≤ 0.0002) and both diffuse large B-cell and follicular lymphomas (P-trends < 0.05). 21148756 2011
Entrez Id: 1109
Gene Symbol: AKR1C4
AKR1C4
0.010 GeneticVariation disease BEFREE In contrast, the sequence from the follicular lymphoma showed 29 nucleotide changes giving rise to 14 amino acid substitutions, which were scattered among the CDR and FW regions. 8324224 1993
Entrez Id: 207
Gene Symbol: AKT1
AKT1
0.010 AlteredExpression disease BEFREE AKT expression was present in all FL and lymphadenitis cases. 25096023 2014