Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 100
Gene Symbol: ADA
ADA
0.100 GeneticVariation disease BEFREE Deficiency in the enzyme adenosine deaminase (ADA) in humans manifests primarily as severe lymphopenia and immunodeficiency, resulting in death by 6 months of age, if untreated. 10833410 2000
Entrez Id: 110806290
Gene Symbol: MYOCOS
MYOCOS
0.100 GeneticVariation disease CLINVAR
Entrez Id: 100
Gene Symbol: ADA
ADA
0.100 GeneticVariation disease BEFREE Numerous deleterious mutations occurring in the ADA gene have been found in patients with profound lymphopenia (T<sup>-</sup> B<sup>-</sup> NK<sup>-</sup>), thus underscoring the importance of functional purine metabolism for the development of the immune defense. 28842866 2017
Entrez Id: 3630
Gene Symbol: INS
INS
0.050 GeneticVariation disease BEFREE Recently, the rat Ian4 (rIan4) was cloned and it appears to be identical to the gene Iddm1/lyp responsible for severe lymphopenia and the development of insulin-dependent diabetes in the BB-DP rat. 14724691 2004
Entrez Id: 2875
Gene Symbol: GPT
GPT
0.050 GeneticVariation disease BEFREE Most frequent toxicities were anemia (89%), elevated aspartate aminotransferase (79%), fatigue (79%), nausea (79%), elevated alanine aminotransferase (74%), lymphopenia (74%), leukopenia (74%), neutropenia (63%), and thrombocytopenia (63%), most Grade 1/2. 28990119 2018
Entrez Id: 2875
Gene Symbol: GPT
GPT
0.050 GeneticVariation disease BEFREE Hyperglycaemia and hyperbilirubinaemia (85.7% each), increased aspartate transaminase (76.2%) and alanine transaminase (47.6%), leucocytosis (61.9%), lymphopenia (57.1%), decreased sodium and chloride (57.1% each), and increased urea (52.4%) were the most common abnormalities in blood work. 30183482 2019
Entrez Id: 3630
Gene Symbol: INS
INS
0.050 GeneticVariation disease BEFREE Several crossing studies using diabetic BB/OK and diabetes-resistant rat strains have clearly shown that the MHC class-II-genes of the RT1u haplotype (Iddm1) and the lymphopenia (Iddm2) are essential but not sufficient for type 1 diabetes development. 9858659 1998
Entrez Id: 2875
Gene Symbol: GPT
GPT
0.050 GeneticVariation disease BEFREE Considering all dose levels, the most common grade 3-4 adverse events were lymphopenia (32 [64%] of 50 patients), neutropenia (31 [62%]), thrombocytopenia (14 [28%]), anaemia (13 [26%]), hypophosphataemia (20 [40%]), and alanine aminotransferase concentration increase (9 [18%]). 30217671 2018
Entrez Id: 3119
Gene Symbol: HLA-DQB1
HLA-DQB1
0.050 GeneticVariation disease BEFREE Recently, the rat Ian4 (rIan4) was cloned and it appears to be identical to the gene Iddm1/lyp responsible for severe lymphopenia and the development of insulin-dependent diabetes in the BB-DP rat. 14724691 2004
Entrez Id: 3119
Gene Symbol: HLA-DQB1
HLA-DQB1
0.050 GeneticVariation disease BEFREE Several crossing studies using diabetic BB/OK and diabetes-resistant rat strains have clearly shown that the MHC class-II-genes of the RT1u haplotype (Iddm1) and the lymphopenia (Iddm2) are essential but not sufficient for type 1 diabetes development. 9858659 1998
Entrez Id: 3119
Gene Symbol: HLA-DQB1
HLA-DQB1
0.050 GeneticVariation disease BEFREE In this study, we report the positional cloning of the Iddm1/lyp locus. 12097339 2002
Entrez Id: 3630
Gene Symbol: INS
INS
0.050 GeneticVariation disease BEFREE In this study, we report the positional cloning of the Iddm1/lyp locus. 12097339 2002
Entrez Id: 3575
Gene Symbol: IL7R
IL7R
0.030 GeneticVariation disease BEFREE Interleukin 7 receptor alpha-chain-mutation severe combined immunodeficiency without lymphopenia: correction with haploidentical T-cell-depleted bone marrow transplantation. 17201233 2006
Entrez Id: 3575
Gene Symbol: IL7R
IL7R
0.030 GeneticVariation disease BEFREE Vaccine-associated varicella and rubella infections in severe combined immunodeficiency with isolated CD4 lymphocytopenia and mutations in IL7R detected by tandem whole exome sequencing and chromosomal microarray. 25046553 2014
Entrez Id: 3561
Gene Symbol: IL2RG
IL2RG
0.030 GeneticVariation disease BEFREE We describe a 5-year-old boy with mild susceptibility to infection who was investigated for a mutation in IL2RG due to persistent natural killer (NK)- and T-cell lymphopenia. 18728247 2008
Entrez Id: 3561
Gene Symbol: IL2RG
IL2RG
0.030 GeneticVariation disease BEFREE A novel mutation in the interleukin-2 receptor gamma gene as the cause of lymphopenia in a neonate vertically exposed to human immunodeficiency virus. 15702055 2005
Entrez Id: 947
Gene Symbol: CD34
CD34
0.020 GeneticVariation disease BEFREE HIV-infected young adults displayed decreasing numbers of CD34 hematopoietic progenitors and mature lymphocytes, indicative of general lymphopenia and reminiscent of the alterations found in patients infected in adulthood or uninfected elderly people. 31149945 2019
Entrez Id: 695
Gene Symbol: BTK
BTK
0.020 GeneticVariation disease BEFREE Prevalence of BTK mutations in male Algerian patterns with agammaglobulinemia and severe B cell lymphopenia. 26387629 2015
Entrez Id: 2214
Gene Symbol: FCGR3A
FCGR3A
0.020 GeneticVariation disease BEFREE Furthermore, a combination of the FcgammaRIIa R/R genotype and CRP4 A-allele was associated with lymphopenia (P = 0.02) and a similar result was found for the combination of FcgammaRIIIa F/F and FcgammaRIIIb NA2/NA2 (P = 0.04). 17596285 2007
Entrez Id: 3718
Gene Symbol: JAK3
JAK3
0.020 GeneticVariation disease BEFREE The discovery that Jak3 mutations are a significant cause of severe combined immunodeficiency (SCID), a rare inherited defect characterized by lymphopenia, has provided valuable insights into the functions of Jak3 in lymphoid development and function. 15220007 2004
Entrez Id: 26503
Gene Symbol: SLC17A5
SLC17A5
0.020 GeneticVariation disease BEFREE Most common grade 3/4 toxicities included thrombocytopenia (32.5 %), lymphopenia (17.5 %), neutropenia (12.5 %), ALT (7.5 %) and AST (5 %) elevation. 27350411 2016
Entrez Id: 133482
Gene Symbol: SLCO6A1
SLCO6A1
0.010 GeneticVariation disease BEFREE Patients with IBD with a wildtype GST-M1 genotype present increased probability of developing adverse effects and increased incidence of lymphopenia during azathioprine treatment. 17206640 2007
Entrez Id: 5310
Gene Symbol: PKD1
PKD1
0.010 GeneticVariation disease BEFREE As mutations in polycystin-1 and -2 are associated with decreased proliferation of immortalized lymphoblastoid cells in PKD, we investigated whether lymphopenia could be an unrecognized trait of PKD. 28387829 2018
Entrez Id: 3431
Gene Symbol: SP110
SP110
0.010 GeneticVariation disease BEFREE This approach will fail to identify VODI patients because the disease is not associated with severe T cell lymphopenia at birth; (2) the SP110 gene contains 17 exons, making it a challenge for Sanger sequencing. 28825155 2017
Entrez Id: 57217
Gene Symbol: TTC7A
TTC7A
0.010 GeneticVariation disease BEFREE Mutations in the tetratricopeptide repeat domain 7A (TTC7A) gene cause very early onset inflammatory bowel diseases (VOIBD) or multiple intestinal atresia associated with immune deficiency of various severities, ranging from combined immune deficiency to mild lymphopenia. 31787977 2019