Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 23312
Gene Symbol: DMXL2
DMXL2
0.010 Biomarker disease BEFREE A recent study reported an important role of Dmx-like 2 (DMXL2), a gene encoding rabconnectin-3α vesicular protein, in human subjects with mental retardation and neuroendocrine impairment of reproduction. 27957681 2017
Entrez Id: 3313
Gene Symbol: HSPA9
HSPA9
0.010 GeneticVariation disease BEFREE The AIFM1 gene has been linked with COXPD6 encephalomyopathy (MIM 300816), Cowchock syndrome (MIM 310490) and X-linked deafness with neuropathy (DFNX5, MIM 300614), none of which are similar to SEMD-MR. Our results place SEMD as the third instance of a skeletal phenotype associated with a mitochondrial disease (the others being EVEN-PLUS syndrome caused by mutations of HSPA9 and CODAS syndrome due to LONP1 mutations). 27102849 2017
Entrez Id: 10664
Gene Symbol: CTCF
CTCF
0.010 GeneticVariation disease BEFREE Autosomal dominant mental retardation 21 (MRD21) is a very rare condition, characterized by short stature, microcephaly, mild facial dysmorphisms and intellectual disability that ranged from mild to severe. 28619046 2017
Entrez Id: 29925
Gene Symbol: GMPPB
GMPPB
0.010 GeneticVariation disease BEFREE Mutations in GMPPB gene have been reported in patients with early-onset disease ranging from severe congenital muscular dystrophies to limb-girdle muscular dystrophy (LGMD) with mental retardation. 28478914 2017
Entrez Id: 2290
Gene Symbol: FOXG1
FOXG1
0.010 GeneticVariation disease BEFREE We recommend that patients with congenital RTT and Rett-like MR, especially those with brain malformations, such as hypoplasia of the corpus callosum, should be tested for FOXG1 mutations. 28851325 2017
Entrez Id: 51117
Gene Symbol: COQ4
COQ4
0.010 GeneticVariation disease BEFREE Here, we report a four-year-old girl diagnosed with minor mental retardation and lethal rhabdomyolysis harboring a heterozygous mutation (c.483G > C (E161D)) in COQ4. 28472853 2017
Entrez Id: 9361
Gene Symbol: LONP1
LONP1
0.010 GeneticVariation disease BEFREE The AIFM1 gene has been linked with COXPD6 encephalomyopathy (MIM 300816), Cowchock syndrome (MIM 310490) and X-linked deafness with neuropathy (DFNX5, MIM 300614), none of which are similar to SEMD-MR. Our results place SEMD as the third instance of a skeletal phenotype associated with a mitochondrial disease (the others being EVEN-PLUS syndrome caused by mutations of HSPA9 and CODAS syndrome due to LONP1 mutations). 27102849 2017
Entrez Id: 64222
Gene Symbol: TOR3A
TOR3A
0.010 Biomarker disease BEFREE In a predictive model, lower ADOS social domain scores were predicted by older age (<i>P</i>=0.001), lower scores on the ADIR-59 (<i>P</i>=0.01), and the absence of mental retardation (<i>P</i>=0.049). 28356742 2017
Entrez Id: 3418
Gene Symbol: IDH2
IDH2
0.010 Biomarker disease BEFREE In particular, TPM1, SMAD6, SMAD3, and HCN4 may be associated with her heart defects, and HEXA, KIF7, and IDH2 are responsible for her developmental and mental retardation. 27218255 2016
Entrez Id: 374654
Gene Symbol: KIF7
KIF7
0.010 Biomarker disease BEFREE In particular, TPM1, SMAD6, SMAD3, and HCN4 may be associated with her heart defects, and HEXA, KIF7, and IDH2 are responsible for her developmental and mental retardation. 27218255 2016
Entrez Id: 27315
Gene Symbol: PGAP2
PGAP2
0.010 GeneticVariation disease BEFREE Mutations in the PGAP2 gene cause hyperphosphatasia mental retardation syndrome-3. 27871432 2016
Entrez Id: 25836
Gene Symbol: NIPBL
NIPBL
0.010 Biomarker disease BEFREE Previously, we have demonstrated that haploinsufficiency of NIPBL produces similar effects in zebrafish and in patients fibroblasts indicating a possible common feature for neurological defects and mental retardation in cohesinopathies. 26206533 2016
Entrez Id: 366
Gene Symbol: AQP9
AQP9
0.010 Biomarker disease BEFREE In addition, we suggest that a microdeletion on the 15q21.3 region of the mother, which involved TCF2, TCF12, ADMA10 and AQP9, might be associated with mental retardation. 27218255 2016
Entrez Id: 6938
Gene Symbol: TCF12
TCF12
0.010 GeneticVariation disease BEFREE In addition, we suggest that a microdeletion on the 15q21.3 region of the mother, which involved TCF2, TCF12, ADMA10 and AQP9, might be associated with mental retardation. 27218255 2016
Entrez Id: 80208
Gene Symbol: SPG11
SPG11
0.010 Biomarker disease BEFREE SPG11 belongs to the autosomal recessive hereditary spastic paraplegias (HSP) and presents during childhood or puberty with a complex clinical phenotype encompassing learning difficulties, ataxia, peripheral neuropathy, amyotrophy, and mental retardation. 27318863 2016
Entrez Id: 7436
Gene Symbol: VLDLR
VLDLR
0.010 GeneticVariation disease BEFREE The four other patients had a milder phenotype consistent with CARMQ1 (cerebellar ataxia and mental retardation with or without quadrupedal locomotion). 27000652 2016
Entrez Id: 10531
Gene Symbol: PITRM1
PITRM1
0.010 GeneticVariation disease BEFREE We identified two siblings carrying a homozygous PITRM1 missense mutation (c.548G>A, p.Arg183Gln) associated with an autosomal recessive, slowly progressive syndrome characterised by mental retardation, spinocerebellar ataxia, cognitive decline and psychosis. 26697887 2016
Entrez Id: 10021
Gene Symbol: HCN4
HCN4
0.010 Biomarker disease BEFREE In particular, TPM1, SMAD6, SMAD3, and HCN4 may be associated with her heart defects, and HEXA, KIF7, and IDH2 are responsible for her developmental and mental retardation. 27218255 2016
Entrez Id: 6886
Gene Symbol: TAL1
TAL1
0.010 GeneticVariation disease BEFREE We utilized a sample of 299 adult females aged between 19 and 86 years, carrying fragile X mental retardation (FMR1) alleles with small CCG expansions ranging from 50 to 141 repeats to analyse the relationships between psychological symptoms as assessed by the Symptom Checklist-90-Revised (SCL-90-R) and the size of the CGG repeat in the FMR1 gene. 24428240 2015
Entrez Id: 55755
Gene Symbol: CDK5RAP2
CDK5RAP2
0.010 Biomarker disease BEFREE CDK5RAP2 is one of the primary microcephaly genes that are associated with reduced brain size and mental retardation. 26550838 2015
Entrez Id: 1373
Gene Symbol: CPS1
CPS1
0.010 GeneticVariation disease BEFREE Carbamoyl phosphate synthetase 1 (CPS1) deficiency (CPS1D) is an inborn error of the urea cycle having autosomal (2q34) recessive inheritance that can cause hyperammonemia and neonatal death or mental retardation. 26059772 2015
Entrez Id: 4331
Gene Symbol: MNAT1
MNAT1
0.010 GeneticVariation disease BEFREE Therefore, we conclude that these p35 mutations are unlikely to cause mental retardation. 26469698 2015
Entrez Id: 2220
Gene Symbol: FCN2
FCN2
0.010 GeneticVariation disease BEFREE Therefore, we conclude that these p35 mutations are unlikely to cause mental retardation. 26469698 2015
Entrez Id: 113130
Gene Symbol: CDCA5
CDCA5
0.010 GeneticVariation disease BEFREE Therefore, we conclude that these p35 mutations are unlikely to cause mental retardation. 26469698 2015
Entrez Id: 2644
Gene Symbol: GCHFR
GCHFR
0.010 GeneticVariation disease BEFREE Therefore, we conclude that these p35 mutations are unlikely to cause mental retardation. 26469698 2015