Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 8314
Gene Symbol: BAP1
BAP1
0.600 GeneticVariation disease BEFREE In line with the screen results, primary mesothelioma (BAP1+/-) overexpressing BAP1 C91A (catalytically dead mutant) were more resistant to RNR inhibition, while BAP1 knockdown in the BAP1-proficient cell lines rescued the cells from their vulnerability to RNR depletion. 31619462 2020
Entrez Id: 8314
Gene Symbol: BAP1
BAP1
0.600 Biomarker disease BEFREE Surface components of MM of the pleura showed concordant loss as the invasive tumor suggesting a potential role for BAP1 loss for recognizing so-called early mesothelioma. 30640754 2020
Entrez Id: 8314
Gene Symbol: BAP1
BAP1
0.600 Biomarker disease BEFREE Combinations of staining using cyclin D1 >50% plus BAP1 or MTAP loss in epithelial mesotheliomas produced about a 10% increase in sensitivity. 31685964 2020
Entrez Id: 8314
Gene Symbol: BAP1
BAP1
0.600 GeneticVariation disease BEFREE While the BAP1-mutated subgroup is similar to diffuse malignant pleural mesotheliomas, the TRAF7-mutated subgroup overlaps genetically with adenomatoid tumors and well-differentiated papillary mesotheliomas, in which recurrent TRAF7 mutations have been described. 31371807 2020
Entrez Id: 8314
Gene Symbol: BAP1
BAP1
0.600 AlteredExpression disease BEFREE Immunocytochemical studies on PF cell blocks allow: (a) to distinguish mesothelioma from reactive mesothelial proliferations (e.g. loss of BAP1 nuclear expression, complemented by the demonstration of p16 deletion using fluorescence in situ hybridization, indicate mesothelioma); (b) to separate mesothelioma from adenocarcinoma (e.g. calretinin, CK 5/6, WT-1 and D2-40 are markers of mesothelioma, whereas CEA, EPCAM, TTF-1, napsin A, and claudin 4 are markers of carcinoma); and (c) to reveal tumor origin in pleural metastases of an unknown primary site (e.g. 30354850 2019
Entrez Id: 8314
Gene Symbol: BAP1
BAP1
0.600 AlteredExpression disease BEFREE Cytologic identification of mesothelioma is particularly challenging, but testing for BAP1 nuclear expression (immunocytochemistry) and p16 deletion (fluorescence in situ hybridization) has greatly improved our diagnostic capabilities. 31082996 2019
Entrez Id: 10232
Gene Symbol: MSLN
MSLN
0.600 AlteredExpression disease BEFREE MSLN is a validated cancer target known to be overexpressed in mesothelioma, ovarian, lung, breast, and pancreatic cancer, with low expression in normal tissue. 30850485 2019
Entrez Id: 10232
Gene Symbol: MSLN
MSLN
0.600 Biomarker disease BEFREE Mesothelin targeting CAR-T has been reported in mesothelioma, lung cancer, breast cancer, and pancreas cancer. 30777106 2019
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.600 Biomarker disease BEFREE Sequential use of BAP1 immunohistochemistry and CDKN2A fluorescence in situ hybridization is specific for diagnosis of mesothelioma, but fluorescence in situ hybridization is both costly and time-consuming. 30315275 2019
Entrez Id: 8314
Gene Symbol: BAP1
BAP1
0.600 AlteredExpression disease BEFREE Retrospective response analysis of BAP1 expression to predict the clinical activity of systemic cytotoxic chemotherapy in mesothelioma. 30642545 2019
Entrez Id: 8314
Gene Symbol: BAP1
BAP1
0.600 Biomarker disease BEFREE We studied 49 cases of mesothelioma (17 epithelioid mesothelioma, 22 biphasic mesothelioma, and 10 sarcomatoid mesothelioma) and 23 benign mesothelial proliferations using a 5-hmC single immunohistochemical stain, CAM5.2/5-hmC double immunohistochemical stain, and BAP1 immunohistochemistry. 30315275 2019
Entrez Id: 10232
Gene Symbol: MSLN
MSLN
0.600 AlteredExpression disease BEFREE To explore CAR-T therapy in NSCLC and mesothelioma, second-generation CAR-T cells were constructed targeting mesothelin (MSLN), which is abundant in NSCLC and mesothelioma but is under expressed in normal tissues. 30651858 2019
Entrez Id: 10232
Gene Symbol: MSLN
MSLN
0.600 AlteredExpression disease BEFREE MSLN is a GPI-anchored membrane glycoprotein overexpressed in mesothelioma, ovarian, pancreatic, lung, and breast cancers with limited expression in healthy tissue. 31064781 2019
Entrez Id: 8314
Gene Symbol: BAP1
BAP1
0.600 GeneticVariation disease BEFREE Here, we report a novel pathogenic BAP1 germline variant in a family with a history of BIMTs, cutaneous melanomas, and mesotheliomas. 31706282 2019
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.600 AlteredExpression disease BEFREE The combined examination of the 9p21 deletion and loss of p16 expression is helpful for diagnostic purposes, but because the FISH method is an expensive technique and loss of p16 expression is not specific for mesotheliomas, p16 negativity can guide practitioners to eliminate cases that require further investigation by FISH. 30885529 2019
Entrez Id: 8314
Gene Symbol: BAP1
BAP1
0.600 GeneticVariation disease BEFREE The deubiquitinating enzyme BAP1 is mutated in a hereditary cancer syndrome with a high risk of mesothelioma and melanocytic tumors. 30156010 2019
Entrez Id: 8314
Gene Symbol: BAP1
BAP1
0.600 AlteredExpression disease BEFREE Immunohistochemistry demonstrated intact BAP1 expression in all cases of well-differentiated papillary mesothelioma, indicating that this is a reliable marker for distinguishing well-differentiated papillary mesothelioma from malignant mesotheliomas that frequently display loss of expression. 30171198 2019
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.600 AlteredExpression disease BEFREE Cytologic identification of mesothelioma is particularly challenging, but testing for BAP1 nuclear expression (immunocytochemistry) and p16 deletion (fluorescence in situ hybridization) has greatly improved our diagnostic capabilities. 31082996 2019
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.600 GeneticVariation disease BEFREE Immunocytochemical studies on PF cell blocks allow: (a) to distinguish mesothelioma from reactive mesothelial proliferations (e.g. loss of BAP1 nuclear expression, complemented by the demonstration of p16 deletion using fluorescence in situ hybridization, indicate mesothelioma); (b) to separate mesothelioma from adenocarcinoma (e.g. calretinin, CK 5/6, WT-1 and D2-40 are markers of mesothelioma, whereas CEA, EPCAM, TTF-1, napsin A, and claudin 4 are markers of carcinoma); and (c) to reveal tumor origin in pleural metastases of an unknown primary site (e.g. 30354850 2019
Entrez Id: 8314
Gene Symbol: BAP1
BAP1
0.600 GeneticVariation disease BEFREE The prevalence of pathogenic germline BAP1 mutations in patients with mesothelioma was 4.4% (95% confidence interval 1.1-11.1). 31323388 2019
Entrez Id: 8314
Gene Symbol: BAP1
BAP1
0.600 Biomarker disease BEFREE Loss of BAP1 as a candidate predictive biomarker for immunotherapy of mesothelioma. 30914057 2019
Entrez Id: 8314
Gene Symbol: BAP1
BAP1
0.600 Biomarker disease BEFREE BAP1 loss was detected in 61/88 (69%) tissues and in 20/30 (67%) cytology samples from mesothelioma with a specificity of 100% for both sampling methods. 31165505 2019
Entrez Id: 8314
Gene Symbol: BAP1
BAP1
0.600 Biomarker disease BEFREE Loss of BAP1 function is implicated in the oncogenesis of several types of cancers including uveal, mucosal and some cutaneous melanomas in humans, as well as in mesothelioma. 30060843 2018
Entrez Id: 10232
Gene Symbol: MSLN
MSLN
0.600 AlteredExpression disease BEFREE MSLN, a 40kDa glycoprotein that is overexpressed in many cancers including ovarian and mesotheliomas is suggested to play a role in cell survival, proliferation, tumor progression, and adherence. 30134520 2018
Entrez Id: 8314
Gene Symbol: BAP1
BAP1
0.600 AlteredExpression disease BEFREE Finally, the protein levels of ASXL2, BAP1 and UBE2E enzymes are highly correlated in mesothelioma tumors suggesting the importance of this signaling axis for tumor suppression. 30349006 2018