Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 4363
Gene Symbol: ABCC1
ABCC1
0.010 Biomarker group BEFREE MRP deficiency leads to neural tube defects in brain development; MARCKS overexpression strongly depresses the proliferation of cancer cells. 10736562 2000
Entrez Id: 60
Gene Symbol: ACTB
ACTB
0.010 Biomarker group BEFREE In addition, transcription factors, as well as genes involved in mitosis, actin regulation, and methylation appear to be implicated in the causes of NTDs. 11575845 2001
Entrez Id: 100
Gene Symbol: ADA
ADA
0.010 GeneticVariation group BEFREE Of the 24 SNPs tested for replication, ADA rs452159 and MTR rs10925260 were significantly associated with isolated NTDs. 25293959 2014
Entrez Id: 174
Gene Symbol: AFP
AFP
0.100 AlteredExpression group BEFREE The risk of an open neural tube defect or other serious fetal abnormality was 60% when alpha-fetoprotein levels measured greater than or equal to +3 and 86% for levels greater than or equal to +5 SD. 6205588 1984
Entrez Id: 174
Gene Symbol: AFP
AFP
0.100 Biomarker group BEFREE A severe neural tube defect diagnosed in a 191/2-week-old "at risk" fetus on the evidence of a markedly elevated alpha-fetoprotein level in the amniotic fluid, turned out to be an occipital myelocoele. 47393 1975
Entrez Id: 174
Gene Symbol: AFP
AFP
0.100 Biomarker group BEFREE In an attempt to identify biochemical components of the genetic predisposition to neural tube defects (NTDs), levels of folate, cobalamin, apo-transcobalamins I and II and alpha-fetoprotein were studied in midtrimester amniotic fluid from 24 pregnant women who had previously had a child with NTD. 2430743 1986
Entrez Id: 174
Gene Symbol: AFP
AFP
0.100 Biomarker group BEFREE Routine maternal serum alpha-fetoprotein screening for neural tube defects, and now also for aneuploidy, is a classic example in which there has been a schism between the clinical expertise to manage such a program within a tertiary level reproductive genetics center and the ability to reach patients in regions that are not routinely accessible to the tertiary center. 2438935 1987
Entrez Id: 174
Gene Symbol: AFP
AFP
0.100 Biomarker group BEFREE It should also be recognized in AFP screening for neural tube defects or Down's syndrome during pregnancy. 9681083 1998
Entrez Id: 174
Gene Symbol: AFP
AFP
0.100 Biomarker group BEFREE To establish gestational age-specific and body weight-specific mid-trimester normal median equations for the prenatal serum markers α-fetoprotein (AFP), free β subunit human chorionic gonadotropin (fβHCG), and unconjugated oestriol (uE3) for a Chinese population; to compare and replace the median equations built in LifeCycle software; to evaluate the effect of equations used for gestation correction on estimating risk in Down's syndrome, Edward's syndrome, and neural tube defect (NTD).A total of 353,065 cases of prenatal screening data of pregnant women were screened by 13 prenatal screening institutions in China. 30170416 2018
Entrez Id: 174
Gene Symbol: AFP
AFP
0.100 Biomarker group BEFREE The diagnosis of fetal triploidy should be considered when there is a very high maternal serum alpha-fetoprotein and no ultrasound evidence of open neural tube defect, ventral wall defect, or any other explanation. 2473468 1989
Entrez Id: 174
Gene Symbol: AFP
AFP
0.100 Biomarker group BEFREE Neural tube defects are associated with an increase of AFP in amniotic fluid, but, as in normal pregnancies, the values decrease with increasing gestational age. 84722 1979
Entrez Id: 174
Gene Symbol: AFP
AFP
0.100 Biomarker group BEFREE The increased frequency of hydrocephalus among sibs of probands with a NTD and vice versa suggests that, following the birth of a child with either malformations, subsequent pregnancies should be monitored at mid-gestation by amniotic fluid AFP and serial ultrasound examination. 7241527 1981
Entrez Id: 174
Gene Symbol: AFP
AFP
0.100 Biomarker group BEFREE We detected neural tube defects (0.2%) as expected but were surprised by the efficacy with which low serum alpha-fetoprotein values identified aneuploid fetuses. 2428249 1986
Entrez Id: 174
Gene Symbol: AFP
AFP
0.100 Biomarker group BEFREE However, a separate screening protocol using AFP at 15-18 weeks gestation would still be required for effective detection of neural tube defects. 8284287 1993
Entrez Id: 196
Gene Symbol: AHR
AHR
0.010 Biomarker group BEFREE Blood samples were collected from 534 mothers of fetuses or newborns with NTDs and 534 control mothers who had healthy term newborns and were assayed for 12 polymorphisms in the AHR and cytochrome P450 (CYP) genes. 25051309 2014
Entrez Id: 208
Gene Symbol: AKT2
AKT2
0.010 GeneticVariation group BEFREE And the percentage of methyhlated region of AKT2 promoter were increased in NTDs. 27871477 2016
Entrez Id: 8854
Gene Symbol: ALDH1A2
ALDH1A2
0.030 GeneticVariation group BEFREE Of the secondary tests performed, ARID1A rs11247593 was associated with NTDs in whites, and ALDH1A2 rs7169289 was associated with isolated NTDs in African Americans. 25293959 2014
Entrez Id: 8854
Gene Symbol: ALDH1A2
ALDH1A2
0.030 Biomarker group BEFREE The RA-responsive genes CYP26A1, CRABP1, and ALDH1A2 harbored NTD-specific rare variants in their upstream regions. 29297599 2018
Entrez Id: 8854
Gene Symbol: ALDH1A2
ALDH1A2
0.030 GeneticVariation group BEFREE Analysis of ALDH1A2, CYP26A1, CYP26B1, CRABP1, and CRABP2 in human neural tube defects suggests a possible association with alleles in ALDH1A2. 16237707 2005
Entrez Id: 10840
Gene Symbol: ALDH1L1
ALDH1L1
0.020 GeneticVariation group BEFREE The CT genotype and C allele of rs2276731 in ALDH1L1 significantly were associated with an increased incidence of NTDs (OR = 1.67, 95 % CI 1.129-2.491 with genotype, and OR = 1.32, 95 % CI 0.956-1.816 with allele).The polymorphic loci rs4646733, rs2305225, and rs2276731 in the ALDH1L1 gene maybe potential risk factors for NTDs in the Chinese population. 26993122 2016
Entrez Id: 10840
Gene Symbol: ALDH1L1
ALDH1L1
0.020 Biomarker group BEFREE The folate metabolic enzyme ALDH1L1 is restricted to the midline of the early CNS, suggesting a role in human neural tube defects. 17111379 2007
Entrez Id: 8092
Gene Symbol: ALX1
ALX1
0.020 Biomarker group BEFREE Mutations in transcriptional co-activator genes-Cited2, p300, Cbp, Tfap2α, Carm1 and Cart1 result in NTDs in murine models, thus prompt us to investigate whether homologues of these genes are associated with NTDs in humans. 20932315 2010
Entrez Id: 8092
Gene Symbol: ALX1
ALX1
0.020 Biomarker group BEFREE In genetic NTD models such as Cart1, splotch, Cited2, and crooked tail, and NTD induced by teratogens including valproic acid and fumonisins, the incidence of defects is reduced by maternal folic acid supplementation. 15800852 2005
Entrez Id: 257
Gene Symbol: ALX3
ALX3
0.010 GeneticVariation group BEFREE Mutations in the gene encoding the transcription factor ALX3 cause congenital craniofacial and neural tube defects. 28341857 2017
Entrez Id: 275
Gene Symbol: AMT
AMT
0.010 GeneticVariation group BEFREE Possibly damaging variants were observed in SCZ: A203V, S801N in GLDC, near the atypical nonketotic hyperglycinemia causative mutations (A202V, A802V); G825D in GLDC, a potential neural tube defect causative mutation; and R253X in AMT. 29232014 2018