Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 5457
Gene Symbol: POU4F1
POU4F1
0.010 GeneticVariation disease BEFREE The Brn-3a transcription factor gene (POU4F1) maps close to the locus for the variant late infantile form of neuronal ceroid-lipofuscinosis. 8941380 1996
Entrez Id: 768206
Gene Symbol: PRCD
PRCD
0.010 GeneticVariation disease BEFREE The ERGs of these affected setters differed from those that have been recorded from humans with neuromal ceroid lipofuscinosis (Batten's disease), humans with hereditary retinitis pigmentosa, Irish setters with rod-cone dysplasia, and miniature French poodles with progressive rod-cone degeneration. 7350138 1980
Entrez Id: 825
Gene Symbol: CAPN3
CAPN3
0.020 Biomarker disease BEFREE In neutral conditions, pH 6.0, the PPT1 enzyme activities in NCL 1 patients showed rather higher residual activities and intermediate activities in heterozygotes in NCL 1, which was probably caused by mutated proteins in three cases with NCL 1 patients. 29599076 2018
Entrez Id: 825
Gene Symbol: CAPN3
CAPN3
0.020 GeneticVariation disease BEFREE Neuronal ceroid lipofuscinoses type I and type II (NCL1 and NCL2) also known as Batten disease are the commonly observed neurodegenerative lysosomal storage disorder caused by mutations in the PPT1 and TPP1 genes respectively. 30541466 2018
Entrez Id: 5660
Gene Symbol: PSAP
PSAP
0.020 Biomarker disease BEFREE Thus, our data demonstrate a role of PGRN in PSAP lysosomal trafficking and suggest that impaired lysosomal trafficking of PSAP is an underlying disease mechanism for NCL and FTLD due to GRN mutations. 28541286 2017
Entrez Id: 5660
Gene Symbol: PSAP
PSAP
0.020 Biomarker disease BEFREE In Grn(-/-) mice the lysosomal proteins cathepsin D (CTSD), LAMP (lysosomal-associated membrane protein) 1 and the NCL storage components saposin D and subunit c of mitochondrial ATP synthase (SCMAS) were all found to be elevated. 24619111 2014
Entrez Id: 497231
Gene Symbol: CLN9
CLN9
0.020 Biomarker disease BEFREE A new variant of a group of pediatric neurodegenerative diseases known as neuronal ceroid lipofuscinosis (NCL) or Batten disease has been identified.It is termed CLN9-deficient. 16303764 2006
Entrez Id: 497231
Gene Symbol: CLN9
CLN9
0.020 GeneticVariation disease BEFREE We describe the ninth variant of neuronal ceroid lipofuscinosis (NCL) or Batten disease, due to defects in a putative new gene, CLN9. 15349861 2004
Entrez Id: 497231
Gene Symbol: CLN9
CLN9
0.020 GeneticVariation disease LHGDN We describe the ninth variant of neuronal ceroid lipofuscinosis (NCL) or Batten disease, due to defects in a putative new gene, CLN9. 15349861 2004
Entrez Id: 8722
Gene Symbol: CTSF
CTSF
0.030 GeneticVariation disease BEFREE Kufs disease type B (also termed CLN13), an adult-onset form of neuronal ceroid lipofuscinosis (NCL), is genetically heterogeneous and challenging to diagnose. 29120254 2018
Entrez Id: 23435
Gene Symbol: TARDBP
TARDBP
0.030 Biomarker disease BEFREE Using iPSC-derived human cortical neurons from FTD patients harboring PGRN mutations, we demonstrate that PGRN mutant neurons exhibit decreased nuclear TDP-43 and increased insoluble TDP-43, as well as enlarged electron-dense vesicles, lipofuscin accumulation, fingerprint-like profiles and granular osmiophilic deposits, suggesting that both FTD and NCL-like pathology are present in PGRN patient neurons as compared to isogenic controls. 29036611 2017
Entrez Id: 23435
Gene Symbol: TARDBP
TARDBP
0.030 Biomarker disease BEFREE Loss-of-function mutations in <i>GRN</i> cause frontotemporal dementia (FTD) with transactive response DNA-binding protein of 43 kD (TDP-43)-positive inclusions and neuronal ceroid lipofuscinosis (NCL). 28778989 2017
Entrez Id: 8722
Gene Symbol: CTSF
CTSF
0.030 GeneticVariation disease BEFREE Mutations in the gene encoding cathepsin-F (CTSF) have recently been associated with type-B-Kufs-disease, an adult form of neuronal ceroid-lipofuscinosis. 25576872 2015
Entrez Id: 23435
Gene Symbol: TARDBP
TARDBP
0.030 Biomarker disease BEFREE The present study shows that aged PGRN-deficient mice present with NCL-like pathology as well as TDP-43 aggregates in the VPM/VPL, where a particular vulnerability has been reported in NCL model mice. 25022663 2014
Entrez Id: 8722
Gene Symbol: CTSF
CTSF
0.030 Biomarker disease BEFREE CTSF encodes cathepsin F, a lysosomal cysteine protease, dysfunction of which is a highly plausible candidate mechanism for a storage disorder like ceroid lipofuscinosis. 23297359 2013
Entrez Id: 516
Gene Symbol: ATP5MC1
ATP5MC1
0.030 Biomarker disease BEFREE The neuronal ceroid-lipofuscinosis (NCL) are a heterogeneous group of neurodegenerative diseases characterized by the lysosomal accumulation of ceroid and lipofuscin with mitochondrial ATP synthase subunit C in various tissues. 23180398 2013
Entrez Id: 516
Gene Symbol: ATP5MC1
ATP5MC1
0.030 Biomarker disease BEFREE Mitochondrial ATP synthase subunit c stored in hereditary ceroid-lipofuscinosis contains trimethyl-lysine. 7575423 1995
Entrez Id: 516
Gene Symbol: ATP5MC1
ATP5MC1
0.030 PosttranslationalModification disease BEFREE Lysine methylation of mitochondrial ATP synthase subunit c stored in tissues of dogs with hereditary ceroid lipofuscinosis. 8144584 1994
Entrez Id: 4691
Gene Symbol: NCL
NCL
0.090 GeneticVariation disease BEFREE Here, we summarize the current understanding of the thirteen identified NCL genes and the proteins they encode, touching upon the spectrum of clinical manifestations linked to each of the genes, and we highlight recent progress leading to a broader understanding of key pathways involved in NCL disease pathogenesis and commonalities with other neurodegenerative diseases. 31678159 2019
Entrez Id: 4691
Gene Symbol: NCL
NCL
0.090 GeneticVariation disease BEFREE To date 14 sequence variants in 8 canine orthologs of human NCL genes have been found to cause progressive neurological disorders similar to human NCLs in 12 different dog breeds. 31101435 2019
Entrez Id: 4691
Gene Symbol: NCL
NCL
0.090 GeneticVariation disease BEFREE To date 13 sequence variants in 8 canine orthologs of human NCL genes have been found to occur in 11 dog breeds in which they result in progressive neurological disorders similar to human NCLs. 30956123 2019
Entrez Id: 4691
Gene Symbol: NCL
NCL
0.090 GeneticVariation disease BEFREE To date, 12 mutations in 8 different genes orthologous to the human NCL genes have been found to underlie NCL in a variety of dog breeds. 28860089 2017
Entrez Id: 4691
Gene Symbol: NCL
NCL
0.090 Biomarker disease BEFREE 14 different genes have been linked to NCLs (CLN1-CLN14), but the functions of the proteins encoded by the majority of these genes have not been fully elucidated. 28442266 2017
Entrez Id: 4691
Gene Symbol: NCL
NCL
0.090 Biomarker disease BEFREE In this review we will chronologically summarise work which has led over the years to identification of NCL genes, and outline the potential of novel genomic techniques and related bioinformatic approaches for further genetic dissection and diagnosis of NCLs. 23274885 2013
Entrez Id: 4691
Gene Symbol: NCL
NCL
0.090 GeneticVariation disease BEFREE We report our linkage data on a family with late-infantile NCL and show that the disease in this family is due to a homozygous novel mutation in the most recently described NCL gene (MFSD8). 19277732 2009