Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 5538
Gene Symbol: PPT1
PPT1
0.400 GeneticVariation disease BEFREE We describe a patient with juvenile-onset NCL phenotype with a new CLN1 mutation and deficient PPT activity. 17388982 2007
Entrez Id: 23400
Gene Symbol: ATP13A2
ATP13A2
0.400 GeneticVariation disease BEFREE We also discuss another ATP13A2 mutation that is associated with the family of neurodegenerative disorders called neuronal ceroid lipofuscinoses (NCLs), and we propose a single pathway whereby ATP13A2 mutations may contribute to NCLs and Parkinsonism. 25197640 2014
Entrez Id: 2055
Gene Symbol: CLN8
CLN8
0.400 CausalMutation disease CLINVAR Variant late infantile neuronal ceroid lipofuscinosis in a subset of Turkish patients is allelic to Northern epilepsy. 15024724 2004
Entrez Id: 54982
Gene Symbol: CLN6
CLN6
0.700 GeneticVariation disease LHGDN Variant late infantile ceroid lipofuscinoses associated with novel mutations in CLN6. 19135028 2009
Entrez Id: 23435
Gene Symbol: TARDBP
TARDBP
0.030 Biomarker disease BEFREE Using iPSC-derived human cortical neurons from FTD patients harboring PGRN mutations, we demonstrate that PGRN mutant neurons exhibit decreased nuclear TDP-43 and increased insoluble TDP-43, as well as enlarged electron-dense vesicles, lipofuscin accumulation, fingerprint-like profiles and granular osmiophilic deposits, suggesting that both FTD and NCL-like pathology are present in PGRN patient neurons as compared to isogenic controls. 29036611 2017
Entrez Id: 1201
Gene Symbol: CLN3
CLN3
0.700 GeneticVariation disease BEFREE Using a metabolomics approach based on high resolution 1H NMR spectroscopy of the cortex, cerebellum, and remaining regions of the brain in conjunction with statistical pattern recognition, we report metabolic deficits associated with juvenile NCL in a Cln3 knock-out mouse model. 16239221 2005
Entrez Id: 1201
Gene Symbol: CLN3
CLN3
0.700 CausalMutation disease CLINVAR Update of the mutation spectrum and clinical correlations of over 360 mutations in eight genes that underlie the neuronal ceroid lipofuscinoses. 21990111 2012
Entrez Id: 1200
Gene Symbol: TPP1
TPP1
0.700 CausalMutation disease CLINVAR Update of the mutation spectrum and clinical correlations of over 360 mutations in eight genes that underlie the neuronal ceroid lipofuscinoses. 21990111 2012
Entrez Id: 1203
Gene Symbol: CLN5
CLN5
0.400 CausalMutation disease CLINVAR Update of the mutation spectrum and clinical correlations of over 360 mutations in eight genes that underlie the neuronal ceroid lipofuscinoses. 21990111 2012
Entrez Id: 26224
Gene Symbol: FBXL3
FBXL3
0.100 CausalMutation disease CLINVAR Update of the mutation spectrum and clinical correlations of over 360 mutations in eight genes that underlie the neuronal ceroid lipofuscinoses. 21990111 2012
Entrez Id: 23400
Gene Symbol: ATP13A2
ATP13A2
0.400 GeneticVariation disease BEFREE Until now, fourteen mutations in ATP13A2 have been associated with KRS, while other mutations have been reported in association with neuronal ceroid lipofuscinosis (NCL) and early-onset PD. 26965689 2017
Entrez Id: 54982
Gene Symbol: CLN6
CLN6
0.700 GeneticVariation disease LHGDN Unlike NCLs caused by mutations in CLN1, CLN3, CLN5, and CLN8, there is no major founder mutation in CLN6. 12815591 2003
Entrez Id: 54982
Gene Symbol: CLN6
CLN6
0.700 GeneticVariation disease LHGDN Two novel CLN6 mutations in variant late-infantile neuronal ceroid lipofuscinosis patients of Turkish origin. 15996215 2005
Entrez Id: 1200
Gene Symbol: TPP1
TPP1
0.700 CausalMutation disease CLINVAR Two common mutations in the CLN2 gene underlie late infantile neuronal ceroid lipofuscinosis. 9788728 1998
Entrez Id: 256471
Gene Symbol: MFSD8
MFSD8
0.400 GeneticVariation disease BEFREE Toward identifying the CLN7 gene we here screened the known NCL loci for homozygosity in nine Turkish vLINCL families. 15996215 2005
Entrez Id: 1203
Gene Symbol: CLN5
CLN5
0.400 CausalMutation disease CLINVAR Topology and membrane anchoring of the lysosomal storage disease-related protein CLN5. 24038957 2013
Entrez Id: 26224
Gene Symbol: FBXL3
FBXL3
0.100 CausalMutation disease CLINVAR Topology and membrane anchoring of the lysosomal storage disease-related protein CLN5. 24038957 2013
Entrez Id: 23400
Gene Symbol: ATP13A2
ATP13A2
0.400 GeneticVariation disease BEFREE To see if ATP13A2 mutations could be responsible for some cases of human adult-onset NCL (Kufs disease), we resequenced ATP13A2 from 28 Kufs disease patients. 21362476 2011
Entrez Id: 1203
Gene Symbol: CLN5
CLN5
0.400 Biomarker disease BEFREE To model NCL in human cells, we generated induced pluripotent stem cells (iPSCs) by reprogramming skin fibroblasts from a patient with CLN5 (ceroid lipofuscinosis, neuronal, 5) disease, the late infantile variant form of NCL. 28468312 2017
Entrez Id: 1201
Gene Symbol: CLN3
CLN3
0.700 Biomarker disease BEFREE To identify molecular modulators of synaptic stability and degeneration, we have used the Cln3 <sup>-/-</sup> mouse model of a juvenile form of NCL. 28963550 2017
Entrez Id: 1201
Gene Symbol: CLN3
CLN3
0.700 Biomarker disease BEFREE To identify candidate biomarkers, we analyzed autopsy brain and matching CSF samples from controls and three genetically distinct NCLs due to deficiencies in palmitoyl protein thioesterase 1 (CLN1 disease), tripeptidyl peptidase 1 (CLN2 disease), and CLN3 protein (CLN3 disease). 28792770 2017
Entrez Id: 5538
Gene Symbol: PPT1
PPT1
0.400 Biomarker disease BEFREE To identify candidate biomarkers, we analyzed autopsy brain and matching CSF samples from controls and three genetically distinct NCLs due to deficiencies in palmitoyl protein thioesterase 1 (CLN1 disease), tripeptidyl peptidase 1 (CLN2 disease), and CLN3 protein (CLN3 disease). 28792770 2017
Entrez Id: 1808
Gene Symbol: DPYSL2
DPYSL2
0.010 Biomarker disease BEFREE To further understand the significance and possible contribution to vLINCL of the CLN6-CRMP-2 interaction, we utilized the nclf mouse, which harbors mutations in CLN6. 19235893 2009
Entrez Id: 54982
Gene Symbol: CLN6
CLN6
0.700 Biomarker disease BEFREE To further understand the significance and possible contribution to vLINCL of the CLN6-CRMP-2 interaction, we utilized the nclf mouse, which harbors mutations in CLN6. 19235893 2009
Entrez Id: 23400
Gene Symbol: ATP13A2
ATP13A2
0.400 Biomarker disease BEFREE To determine if loss of one functional Atp13a2 allele can serve as a risk factor for disease, we have now assessed heterozygous Atp13a2 knockout mice for key features of NCL. 29859891 2018