Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 256471
Gene Symbol: MFSD8
MFSD8
0.400 GeneticVariation disease BEFREE A detailed metabolic investigation in proband C for progressive visual failure supported suspicion of neuronal ceroid lipofuscinosis type 7 conditioned by the mutation in the MFSD8 gene. 23386035 2013
Entrez Id: 1200
Gene Symbol: TPP1
TPP1
0.700 Biomarker disease BEFREE A frame shift mutation in canine TPP1 (the ortholog of human CLN2) in a juvenile Dachshund with neuronal ceroid lipofuscinosis. 16621647 2006
Entrez Id: 2055
Gene Symbol: CLN8
CLN8
0.400 Biomarker disease BEFREE A homozygous mutation in the orthologous mouse gene (Cln8) underlies the phenotype of a naturally occurring NCL model, the motor neuron degeneration mouse (mnd). 10861296 2000
Entrez Id: 1201
Gene Symbol: CLN3
CLN3
0.700 Biomarker disease MGD A knock-in reporter model of Batten disease. 17855597 2007
Entrez Id: 1203
Gene Symbol: CLN5
CLN5
0.400 GeneticVariation disease BEFREE A locus for Finnish variant late-infantile NCL, CLN5, has been mapped to chromosome 13q22 and a locus for variant late-infantile NCL, CLN6, to chromosome 15q21-23. 10446748 1999
Entrez Id: 1203
Gene Symbol: CLN5
CLN5
0.400 Biomarker disease MGD A mouse model for Finnish variant late infantile neuronal ceroid lipofuscinosis, CLN5, reveals neuropathology associated with early aging. 15459177 2004
Entrez Id: 1200
Gene Symbol: TPP1
TPP1
0.700 Biomarker disease MGD A mouse model of classical late-infantile neuronal ceroid lipofuscinosis based on targeted disruption of the CLN2 gene results in a loss of tripeptidyl-peptidase I activity and progressive neurodegeneration. 15483130 2004
Entrez Id: 23400
Gene Symbol: ATP13A2
ATP13A2
0.400 Biomarker disease CTD_human A mutation analysis for 14 positional candidate genes in two NCL-cases and one control revealed a strongly associated single nucleotide polymorphism (SNP) in the MAPK PM20/PM21 gene and a perfectly with NCL associated single base pair deletion (c.1620delG) within exon 16 of the ATP13A2 gene. 22022275 2011
Entrez Id: 497231
Gene Symbol: CLN9
CLN9
0.020 Biomarker disease BEFREE A new variant of a group of pediatric neurodegenerative diseases known as neuronal ceroid lipofuscinosis (NCL) or Batten disease has been identified.It is termed CLN9-deficient. 16303764 2006
Entrez Id: 256471
Gene Symbol: MFSD8
MFSD8
0.400 GeneticVariation disease BEFREE A novel MFSD8 mutation in a Russian patient with neuronal ceroid lipofuscinosis type 7: a case report. 30144815 2018
Entrez Id: 1201
Gene Symbol: CLN3
CLN3
0.700 GeneticVariation disease BEFREE A preliminary expression study of two of these mutant enzymes supports the conclusion that juvenile-onset NCL (JNCL with GROD) is caused by missense mutations in the PPT gene that result in mutated enzymes with residual PPT enzyme activity. 10191107 1999
Entrez Id: 5538
Gene Symbol: PPT1
PPT1
0.400 GeneticVariation disease BEFREE A preliminary expression study of two of these mutant enzymes supports the conclusion that juvenile-onset NCL (JNCL with GROD) is caused by missense mutations in the PPT gene that result in mutated enzymes with residual PPT enzyme activity. 10191107 1999
Entrez Id: 6863
Gene Symbol: TAC1
TAC1
0.010 GeneticVariation disease BEFREE A preliminary expression study of two of these mutant enzymes supports the conclusion that juvenile-onset NCL (JNCL with GROD) is caused by missense mutations in the PPT gene that result in mutated enzymes with residual PPT enzyme activity. 10191107 1999
Entrez Id: 5536
Gene Symbol: PPP5C
PPP5C
0.010 GeneticVariation disease BEFREE A preliminary expression study of two of these mutant enzymes supports the conclusion that juvenile-onset NCL (JNCL with GROD) is caused by missense mutations in the PPT gene that result in mutated enzymes with residual PPT enzyme activity. 10191107 1999
Entrez Id: 1201
Gene Symbol: CLN3
CLN3
0.700 Biomarker disease LHGDN A role in vacuolar arginine transport for yeast Btn1p and for human CLN3, the protein defective in Batten disease. 14660799 2003
Entrez Id: 1201
Gene Symbol: CLN3
CLN3
0.700 Biomarker disease BEFREE A sequence analysis indicated that the CLN3 gene was not likely to be responsible for this case of feline NCL because no deleterious mutation was detected. 22627044 2012
Entrez Id: 54982
Gene Symbol: CLN6
CLN6
0.700 GeneticVariation disease BEFREE A survey of fibroblasts and lymphoblasts demonstrated that lack of activity was associated with LINCL arising from mutations in the CLN2 gene but not other neuronal ceroid lipofuscinoses (NCLs), including the CLN6 variant LINCL, classical infantile NCL, classical juvenile NCL, and adult NCL (Kufs' disease). 10428067 1999
Entrez Id: 256471
Gene Symbol: MFSD8
MFSD8
0.400 GeneticVariation disease BEFREE A variant form of late infantile NCL (vLINCL) present in Turkish patients has been considered a distinct clinical and genetic entity among the NCL, the underlying gene (CLN7) being unknown. 15024724 2004
Entrez Id: 2896
Gene Symbol: GRN
GRN
0.100 Biomarker disease BEFREE AAV-mediated progranulin gene (GRN) delivery has been proposed as a treatment for GRN-deficient frontotemporal dementia and neuronal ceroid lipofuscinosis, and recent studies using intraparenchymal AAV-Grn delivery to brain have shown moderate success in histopathologic and behavioral rescue in mouse models. 30559071 2019
Entrez Id: 5538
Gene Symbol: PPT1
PPT1
0.400 GeneticVariation disease BEFREE Additionally, compound heterozygous pathogenic variants of PPT1 gene were detected in a girl, who initially displayed typical RTT features, but progressed into neuronal ceroid lipofuscinoses (NCL) afterwards. 31512412 2019
Entrez Id: 5538
Gene Symbol: PPT1
PPT1
0.400 Biomarker disease LHGDN Adult neuronal ceroid lipofuscinosis caused by deficiency in palmitoyl protein thioesterase 1. 17261688 2007
Entrez Id: 4691
Gene Symbol: NCL
NCL
0.090 GeneticVariation disease BEFREE All mutations in NCL genes are contained in the NCL Mutation Database (http://www.ucl.ac.uk/NCL). 11589012 2001
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.010 GeneticVariation disease BEFREE Also we confirmed that NCL should be suspected in patients with Rett-like phenotype at onset and negative MECP2 mutation. 30144815 2018
Entrez Id: 1201
Gene Symbol: CLN3
CLN3
0.700 Biomarker disease MGD Altered gene expression in the eye of a mouse model for batten disease. 15326100 2004
Entrez Id: 1509
Gene Symbol: CTSD
CTSD
0.300 Biomarker disease BEFREE Although functions are defined for some of the soluble proteins that are defective in NCL (cathepsin D, PPT1, and TPP1), the primary function of the other proteins defective in NCLs (CLN3, CLN5, CLN6, CLN7, and CLN8) remain poorly defined. 20680390 2011