Source: ALL
Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 23532
Gene Symbol: PRAME
PRAME
0.010 Biomarker disease BEFREE Our results show that PRAME IHC may be useful in the assessment of diagnostically challenging nodal melanocytic deposits, such as intraparenchymal nodal nevi, metastases confined to the capsular fibrous tissue, or in the setting of small metastases coexisting with a nodal nevus in the same lymph node. 31633488 2020
Entrez Id: 1759
Gene Symbol: DNM1
DNM1
0.010 Biomarker disease BEFREE Even it is very difficult to differentiate NAM from DNM both with dermoscopy and RCM, RCM can help us to detect remnants of a preexisting nevus and estimate Breslow depth. 31556144 2020
Entrez Id: 1993
Gene Symbol: ELAVL2
ELAVL2
0.010 GeneticVariation disease BEFREE It was found that the yellow module was most significantly associated with the difference between common nevus and SCM, and 13 genes whose expression correlation >0.9 were candidate hub genes. 31557882 2019
Entrez Id: 5894
Gene Symbol: RAF1
RAF1
0.010 GeneticVariation disease BEFREE A RAF1 FISH break-apart test found a balanced rearrangement pattern in the nevus and an unbalanced pattern in the malignant areas. 30945443 2019
Entrez Id: 163786
Gene Symbol: SASS6
SASS6
0.010 Biomarker disease BEFREE RNA sequencing identified an in-frame SASS6(e14)-RAF1(e8) fusion in both components and the nevus. 30945443 2019
Entrez Id: 214
Gene Symbol: ALCAM
ALCAM
0.010 Biomarker disease BEFREE One paraffin-embedded section of the patients' primary melanoma (n = 60), relapse (n = 21), and naevus (n = 17) were immunohistochemically double-stained for Ki-67/MART1 and single-stained for CD271, CD166, and CD20. 29678478 2018
Entrez Id: 931
Gene Symbol: MS4A1
MS4A1
0.010 Biomarker disease BEFREE One paraffin-embedded section of the patients' primary melanoma (n = 60), relapse (n = 21), and naevus (n = 17) were immunohistochemically double-stained for Ki-67/MART1 and single-stained for CD271, CD166, and CD20. 29678478 2018
Entrez Id: 388015
Gene Symbol: RTL1
RTL1
0.010 Biomarker disease BEFREE One paraffin-embedded section of the patients' primary melanoma (n = 60), relapse (n = 21), and naevus (n = 17) were immunohistochemically double-stained for Ki-67/MART1 and single-stained for CD271, CD166, and CD20. 29678478 2018
Entrez Id: 54474
Gene Symbol: KRT20
KRT20
0.010 Biomarker disease BEFREE One paraffin-embedded section of the patients' primary melanoma (n = 60), relapse (n = 21), and naevus (n = 17) were immunohistochemically double-stained for Ki-67/MART1 and single-stained for CD271, CD166, and CD20. 29678478 2018
Entrez Id: 442918
Gene Symbol: MIR373
MIR373
0.010 Biomarker disease BEFREE The transcriptional level of miR-373 was identified to be upregulated in melanoma tissues and cell lines compared with nevus and normal melanocytes. miR-373 was identified to function as an oncomiR, promoting melanoma cell migration. 30542430 2018
Entrez Id: 4804
Gene Symbol: NGFR
NGFR
0.010 Biomarker disease BEFREE One paraffin-embedded section of the patients' primary melanoma (n = 60), relapse (n = 21), and naevus (n = 17) were immunohistochemically double-stained for Ki-67/MART1 and single-stained for CD271, CD166, and CD20. 29678478 2018
Entrez Id: 8161
Gene Symbol: COIL
COIL
0.010 Biomarker disease BEFREE The absorption band of amide I at 1650 cm<sup>-1</sup> was split into two bands, at 1650 cm<sup>-1</sup> and 1633 cm<sup>-1</sup>, due to the presence of both α-helix and random coil protein conformations for melanoma and nevus. 29102935 2018
Entrez Id: 23345
Gene Symbol: SYNE1
SYNE1
0.010 AlteredExpression disease BEFREE Ultrasound can biphasically modulate the CPG2 activity, and can be employed in the CPG2-prodrug therapy to adjust the release and moles of active drugs. 28738357 2017
Entrez Id: 3586
Gene Symbol: IL10
IL10
0.010 Biomarker disease BEFREE The opportunity for IL-10 to regulate a fibroblast-specific formation of a regenerative, HA-rich wound extracellular matrix may lead to the development of innovative therapies to attenuate postnatal fibrosis in organ systems or diseases in which dysregulated inflammation and HA intersect.-Balaji, S., Wang, X., King, A., Le, L. D., Bhattacharya, S. S., Moles, C. M., Butte, M. J., de Jesus Perez, V. A., Liechty, K. W., Wight, T. N., Crombleholme, T. M., Bollyky, P. L., Keswani, S. G. Interleukin-10-mediated regenerative postnatal tissue repair is dependent on regulation of hyaluronan metabolism <i>via</i> fibroblast-specific STAT3 signaling. 27903619 2017
Entrez Id: 1499
Gene Symbol: CTNNB1
CTNNB1
0.010 GeneticVariation disease BEFREE Mutations of the β-catenin pathway change the phenotype of a common nevus with BRAF mutation into that of DPN, with increased pigmentation, cell volume and nuclear cyclin D1 levels. 28935960 2017
Entrez Id: 572
Gene Symbol: BAD
BAD
0.010 Biomarker disease BEFREE RhoJ deletion in BRAF mutant melanocytes modulates the expression of the pro-apoptotic protein BAD as well as genes involved in cellular metabolism, impairing nevus formation, cellular transformation, and metastasis. 28753606 2017
Entrez Id: 2776
Gene Symbol: GNAQ
GNAQ
0.010 GeneticVariation disease BEFREE Mutations in GNAQ/11 genes are considered an early event in the development of uveal melanoma that may derive from a pre-existing nevus. 28809862 2017
Entrez Id: 2113
Gene Symbol: ETS1
ETS1
0.010 AlteredExpression disease BEFREE ETS1, nucleolar and non-nucleolar TERT expression in nevus to melanoma progression. 29262649 2017
Entrez Id: 2706
Gene Symbol: GJB2
GJB2
0.010 GeneticVariation disease BEFREE In 2009 the term porokeratotic anexial ostial nevus was proposed to comprehend porokeratotic eccrine and hair follicle nevus and a related and more common process without follicular involvement: porokeratotic eccrine ostial and dermal duct nevus Recent findings suggest that both entities may be produced by a mutation in GJB2 gene, which is associated to KID syndrome. 29267468 2017
Entrez Id: 81037
Gene Symbol: CLPTM1L
CLPTM1L
0.010 GeneticVariation disease BEFREE In addition, we show that skin DNA methylation is associated in cis with known genome-wide association study single nucleotide polymorphisms for nevus count, at PLA2G6 (P = 1.7 × 10<sup>-49</sup>) and NID1 (P = 6.4 × 10<sup>-14</sup>), as well as melanoma risk, including in or near MC1R, MX2, and TERT/CLPTM1L (P < 1 × 10<sup>-10</sup>). 27993549 2017
Entrez Id: 51561
Gene Symbol: IL23A
IL23A
0.010 Biomarker disease BEFREE IL-23 was found to be essential for melanocyte homeostasis, whereas IL-12 supported nevus development. 28003381 2017
Entrez Id: 10573
Gene Symbol: MRPL28
MRPL28
0.010 Biomarker disease BEFREE This study determined whether decreased p15 levels represent a general biomarker for the transition from nevus to melanoma. 27855847 2016
Entrez Id: 1026
Gene Symbol: CDKN1A
CDKN1A
0.010 Biomarker disease BEFREE Taken together, our results suggest potential roles of LSF as a growth regulator through control of the transcription of p21CIP1 in melanocytes and melanoma cells as well as a biomarker for nevus. 26506241 2016
Entrez Id: 22900
Gene Symbol: CARD8
CARD8
0.010 AlteredExpression disease BEFREE Accordingly, CARD8 expression was found to be reduced in nevus compared to melanoma biopsies. 27810076 2016
Entrez Id: 7099
Gene Symbol: TLR4
TLR4
0.010 AlteredExpression disease BEFREE Moles with further malignant transformation had a higher staining intensity of Syncytin-1 surface unit C-terminus but the transcription level of its locus ERVWE1 was not different from that of moles with further remission and normal placentas. hASCT1 and TLR4, showed lower transcription levels in complete moles when compared to normal placentas. 26992684 2016