Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 8972
Gene Symbol: MGAM
MGAM
0.010 AlteredExpression group BEFREE To test whether reduction in lysosomal enzymatic activity in PD is specific to GCase, we measured GCase, acid sphingomyelinase (deficient in Niemann-Pick disease types A and B), alpha galactosidase A (deficient in Fabry), acid alpha-glucosidase (deficient in Pompe) and galactosylceramidase (deficient in Krabbe) enzymatic activities in dried blood spots of PD patients (n = 648) and controls (n = 317) recruited from Columbia University. 29369793 2018
Entrez Id: 2717
Gene Symbol: GLA
GLA
0.010 Biomarker group BEFREE To test whether reduction in lysosomal enzymatic activity in PD is specific to GCase, we measured GCase, acid sphingomyelinase (deficient in Niemann-Pick disease types A and B), alpha galactosidase A (deficient in Fabry), acid alpha-glucosidase (deficient in Pompe) and galactosylceramidase (deficient in Krabbe) enzymatic activities in dried blood spots of PD patients (n = 648) and controls (n = 317) recruited from Columbia University. 29369793 2018
Entrez Id: 2581
Gene Symbol: GALC
GALC
0.010 Biomarker group BEFREE To test whether reduction in lysosomal enzymatic activity in PD is specific to GCase, we measured GCase, acid sphingomyelinase (deficient in Niemann-Pick disease types A and B), alpha galactosidase A (deficient in Fabry), acid alpha-glucosidase (deficient in Pompe) and galactosylceramidase (deficient in Krabbe) enzymatic activities in dried blood spots of PD patients (n = 648) and controls (n = 317) recruited from Columbia University. 29369793 2018
Entrez Id: 6476
Gene Symbol: SI
SI
0.010 AlteredExpression group BEFREE To test whether reduction in lysosomal enzymatic activity in PD is specific to GCase, we measured GCase, acid sphingomyelinase (deficient in Niemann-Pick disease types A and B), alpha galactosidase A (deficient in Fabry), acid alpha-glucosidase (deficient in Pompe) and galactosylceramidase (deficient in Krabbe) enzymatic activities in dried blood spots of PD patients (n = 648) and controls (n = 317) recruited from Columbia University. 29369793 2018
Entrez Id: 3425
Gene Symbol: IDUA
IDUA
0.010 Biomarker group BEFREE The incidences of Gaucher disease, MPS I, and Niemann-Pick disease were comparable with previously published estimates. 28728811 2017
Entrez Id: 219972
Gene Symbol: MPEG1
MPEG1
0.010 Biomarker group BEFREE The incidences of Gaucher disease, MPS I, and Niemann-Pick disease were comparable with previously published estimates. 28728811 2017
Entrez Id: 7272
Gene Symbol: TTK
TTK
0.010 Biomarker group BEFREE The incidences of Gaucher disease, MPS I, and Niemann-Pick disease were comparable with previously published estimates. 28728811 2017
Entrez Id: 6232
Gene Symbol: RPS27
RPS27
0.010 Biomarker group BEFREE The incidences of Gaucher disease, MPS I, and Niemann-Pick disease were comparable with previously published estimates. 28728811 2017
Entrez Id: 10924
Gene Symbol: SMPDL3A
SMPDL3A
0.010 GeneticVariation group BEFREE Human sphingomyelinase phosphodiesterase like 3a (SMPDL3a) is a secreted enzyme that shares a conserved catalytic domain with human acid sphingomyelinase (aSMase), the enzyme carrying mutations causative of Niemann-Pick disease. 26783088 2016
Entrez Id: 10724
Gene Symbol: OGA
OGA
0.010 GeneticVariation group BEFREE It also accumulates in Niemann-Pick disease types A and B with primary storage of SM and with cholesterol in type C. Reconstitution of GM2 catabolism with β-hexosaminidase A and GM2 activator protein (GM2AP) at uncharged liposomal surfaces carrying GM2 as substrate generated only a physiologically irrelevant catabolic rate, even at pH 4.2. 26175473 2015
Entrez Id: 2761
Gene Symbol: GM2AP1
GM2AP1
0.010 Biomarker group BEFREE It also accumulates in Niemann-Pick disease types A and B with primary storage of SM and with cholesterol in type C. Reconstitution of GM2 catabolism with β-hexosaminidase A and GM2 activator protein (GM2AP) at uncharged liposomal surfaces carrying GM2 as substrate generated only a physiologically irrelevant catabolic rate, even at pH 4.2. 26175473 2015
Entrez Id: 3308
Gene Symbol: HSPA4
HSPA4
0.010 Biomarker group BEFREE Importantly, treatment with recombinant Hsp70 effectively reverts the dramatic increase in lysosomal volume and decrease in lysosomal stability in cells from patients with Niemann-Pick disease, a genetic disorder associated with reduced acid sphingomyelinase activity. 20519957 2010
Entrez Id: 7099
Gene Symbol: TLR4
TLR4
0.010 AlteredExpression group LHGDN Endosomal accumulation of Toll-like receptor 4 causes constitutive secretion of cytokines and activation of signal transducers and activators of transcription in Niemann-Pick disease type C (NPC) fibroblasts: a potential basis for glial cell activation in the NPC brain. 17314284 2007
Entrez Id: 6721
Gene Symbol: SREBF2
SREBF2
0.010 AlteredExpression group LHGDN Modulation of human Niemann-Pick C1-like 1 gene expression by sterol: Role of sterol regulatory element binding protein 2. 17008555 2007
Entrez Id: 256933
Gene Symbol: NPB
NPB
0.010 Biomarker group BEFREE This study describes a diagnostic pitfall in the laboratory diagnosis of patients with sphingomyelinase deficiency (SMD; Niemann-Pick disease types A and B; NPA and NPB), in cases where sphingomyelinase activity was not determined with sphingomyelin as the natural enzymic substrate. 14681755 2003
Entrez Id: 19
Gene Symbol: ABCA1
ABCA1
0.010 AlteredExpression group LHGDN Impaired ABCA1-dependent lipid efflux and hypoalphalipoproteinemia in human Niemann-Pick type C disease. 12813037 2003
Entrez Id: 348
Gene Symbol: APOE
APOE
0.010 Biomarker group BEFREE In addition, novel selection procedures were developed to separate retrovirally corrected and noncorrected NPD fibroblasts based on the receptor-mediated delivery of a fluorescently (pyrene)-labeled sphingomyelin (P12-SPM) to the lysosomes of cells using liposomes coated with apolipoprotein E. In this study, we have used a different, fluorescent derivative of sphingomyelin (lissamine-rhodamine dodecanoyl sphingomyelin; LR12-SPM) to extend and improve this selection system. 1482703 1992
Entrez Id: 6610
Gene Symbol: SMPD2
SMPD2
0.010 AlteredExpression group BEFREE Normal levels of neutral sphingomyelinase activity were measured in brain samples from the three variants of Niemann-Pick disease. 3014212 1986
Entrez Id: 1508
Gene Symbol: CTSB
CTSB
0.020 Biomarker group BEFREE The intracellular proteins cathepsin B and L, two-pore channel 1 and 2, and bona fide receptor Niemann⁻Pick Disease C1 (NPC1) are essential for the endosomal phase of cell entry. 30893855 2019
Entrez Id: 2629
Gene Symbol: GBA
GBA
0.020 Biomarker group BEFREE Glucosylceramide (GlcCer) is the primary storage lipid in the lysosomes of Gaucher patients and a secondary one in Niemann-Pick disease types A, B, and C. The regulatory roles of lipids on the hydrolysis of membrane bound GlcCer by lysosomal β-glucocerebrosidase (GBA1) was probed using a detergent-free liposomal assay. 28126847 2017
Entrez Id: 1118
Gene Symbol: CHIT1
CHIT1
0.020 AlteredExpression group BEFREE Plasma chitotriosidase activity is used to diagnose and monitor some forms of lysosomal storage disorders, such as Gaucher's and Niemann-Pick disease. 26624962 2016
Entrez Id: 1508
Gene Symbol: CTSB
CTSB
0.020 AlteredExpression group BEFREE Cathepsin B overexpression due to acid sphingomyelinase ablation promotes liver fibrosis in Niemann-Pick disease. 22102288 2012
Entrez Id: 1118
Gene Symbol: CHIT1
CHIT1
0.020 AlteredExpression group BEFREE Median chitotriosidase activity was 12 655 nmol/h per ml (interquartile range 4693-20982) in Gaucher disease (GD); 780 (465-1298) in SMD (sphingomyelinase deficiency); 925 (319-1215) in NPC and 50 (29-54) in patients with miscellaneous diseases. 16972172 2006
Entrez Id: 2629
Gene Symbol: GBA
GBA
0.020 Biomarker group LHGDN Glucosylceramidase mass and subcellular localization are modulated by cholesterol in Niemann-Pick disease type C. 14757764 2004
Entrez Id: 283120
Gene Symbol: H19
H19
0.100 GeneticVariation group BEFREE The first is due to the deficient activity of the enzyme acid sphingomyelinase (ASM; "types A & B" NPD), and the second is due to defective function in cholesterol transport ("type C" NPD). 28164782 2017