Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 256933
Gene Symbol: NPB
NPB
0.010 Biomarker group BEFREE This study describes a diagnostic pitfall in the laboratory diagnosis of patients with sphingomyelinase deficiency (SMD; Niemann-Pick disease types A and B; NPA and NPB), in cases where sphingomyelinase activity was not determined with sphingomyelin as the natural enzymic substrate. 14681755 2003
Entrez Id: 4864
Gene Symbol: NPC1
NPC1
0.240 Biomarker group BEFREE The intracellular proteins cathepsin B and L, two-pore channel 1 and 2, and bona fide receptor Niemann⁻Pick Disease C1 (NPC1) are essential for the endosomal phase of cell entry. 30893855 2019
Entrez Id: 4864
Gene Symbol: NPC1
NPC1
0.240 GeneticVariation group BEFREE The Niemann-Pick disease group is now divided into two distinct entities: (1) acid sphingomyelinase-deficient Niemann-Pick disease (ASM-deficient NPD) resulting from mutations in the SMPD1 gene and encompassing type A and type B as well as intermediate forms; (2) Niemann-Pick disease type C (NP-C) including also type D, resulting from mutations in either the NPC1 or the NPC2 gene. 23622394 2013
Entrez Id: 4864
Gene Symbol: NPC1
NPC1
0.240 Biomarker group MGD
Entrez Id: 4864
Gene Symbol: NPC1
NPC1
0.240 GeneticVariation group BEFREE Niemann-Pick type C disease: novel NPC1 mutations and characterization of the concomitant acid sphingomyelinase deficiency. 16143556 2006
Entrez Id: 4864
Gene Symbol: NPC1
NPC1
0.240 GeneticVariation group BEFREE Comprehensive Evaluation of Plasma 7-Ketocholesterol and Cholestan-3β,5α,6β-Triol in an Italian Cohort of Patients Affected by Niemann-Pick Disease due to NPC1 and SMPD1 Mutations. 26790753 2016
Entrez Id: 10577
Gene Symbol: NPC2
NPC2
0.210 GeneticVariation group BEFREE The Niemann-Pick disease group is now divided into two distinct entities: (1) acid sphingomyelinase-deficient Niemann-Pick disease (ASM-deficient NPD) resulting from mutations in the SMPD1 gene and encompassing type A and type B as well as intermediate forms; (2) Niemann-Pick disease type C (NP-C) including also type D, resulting from mutations in either the NPC1 or the NPC2 gene. 23622394 2013
Entrez Id: 10577
Gene Symbol: NPC2
NPC2
0.210 Biomarker group MGD
Entrez Id: 10724
Gene Symbol: OGA
OGA
0.010 GeneticVariation group BEFREE It also accumulates in Niemann-Pick disease types A and B with primary storage of SM and with cholesterol in type C. Reconstitution of GM2 catabolism with β-hexosaminidase A and GM2 activator protein (GM2AP) at uncharged liposomal surfaces carrying GM2 as substrate generated only a physiologically irrelevant catabolic rate, even at pH 4.2. 26175473 2015
Entrez Id: 6232
Gene Symbol: RPS27
RPS27
0.010 Biomarker group BEFREE The incidences of Gaucher disease, MPS I, and Niemann-Pick disease were comparable with previously published estimates. 28728811 2017
Entrez Id: 6476
Gene Symbol: SI
SI
0.010 AlteredExpression group BEFREE To test whether reduction in lysosomal enzymatic activity in PD is specific to GCase, we measured GCase, acid sphingomyelinase (deficient in Niemann-Pick disease types A and B), alpha galactosidase A (deficient in Fabry), acid alpha-glucosidase (deficient in Pompe) and galactosylceramidase (deficient in Krabbe) enzymatic activities in dried blood spots of PD patients (n = 648) and controls (n = 317) recruited from Columbia University. 29369793 2018
Entrez Id: 6609
Gene Symbol: SMPD1
SMPD1
0.700 AlteredExpression group BEFREE Type B NPD cells were transduced with retroviral vectors expressing ASM, labeled with lissamine rhodamine sphingomyelin (LR-SPM), and subjected to preparative fluorescence-activated cell sorting (FACS). 7578419 1995
Entrez Id: 6609
Gene Symbol: SMPD1
SMPD1
0.700 Biomarker group BEFREE Genetic alterations in ASM lead to ASM deficiency (ASMD) and have been linked to Niemann-Pick disease types A and B. Olipudase alfa, a recombinant form of human ASM, is being developed as enzyme replacement therapy to treat the non-neurological manifestations of ASMD. 27725636 2016
Entrez Id: 6609
Gene Symbol: SMPD1
SMPD1
0.700 GeneticVariation group BEFREE Niemann-Pick disease (NPD) is a hereditary lysosomal storage disorder in which mutations in the sphingomyelin phosphodiesterase gene leads to partial or complete deficiency of the sphingomyelinase enzyme. 29845436 2019
Entrez Id: 6609
Gene Symbol: SMPD1
SMPD1
0.700 Biomarker group BEFREE Identification of a distinct mutation spectrum in the SMPD1 gene of Chinese patients with acid sphingomyelinase-deficient Niemann-Pick disease. 23356216 2013
Entrez Id: 6609
Gene Symbol: SMPD1
SMPD1
0.700 GeneticVariation group BEFREE However, not every sequence variation in SMPD1 is detrimental and gives rise to NPD. 26084044 2015
Entrez Id: 6609
Gene Symbol: SMPD1
SMPD1
0.700 GeneticVariation group BEFREE Inactivating mutations in ASMase cause Niemann-Pick disease, and its inhibition is also beneficial in models of depression and cancer. 27435900 2016
Entrez Id: 6609
Gene Symbol: SMPD1
SMPD1
0.700 Biomarker group BEFREE In addition to its role in NPD, over the past two decades, the importance of sphingolipids, and ASM in particular, in normal physiology and the pathophysiology of numerous common diseases also has become known. 23290778 2013
Entrez Id: 6609
Gene Symbol: SMPD1
SMPD1
0.700 Biomarker group BEFREE ASM deficient lymphoblasts derived from patients with Niemann-Pick disease (NPD) fail to undergo apoptosis in response to external signals and Fas cross-linking. 11310411 2000
Entrez Id: 6609
Gene Symbol: SMPD1
SMPD1
0.700 CausalMutation group CLINVAR Acid sphingomyelinase deficiency. Phenotype variability with prevalence of intermediate phenotype in a series of twenty-five Czech and Slovak patients. A multi-approach study. 15877209 2005
Entrez Id: 6609
Gene Symbol: SMPD1
SMPD1
0.700 GeneticVariation group BEFREE Herein, we report on a new point mutation in the SMPD-1 gene that was discovered in a patient with type B NPD. 22264577 2012
Entrez Id: 6609
Gene Symbol: SMPD1
SMPD1
0.700 Biomarker group BEFREE These data thus demonstrate, for the first time, imprinting at the SMPD1 gene and reveal the influence of this epigenetic modification on the presentation of ASM-deficient NPD. 16642440 2006
Entrez Id: 6609
Gene Symbol: SMPD1
SMPD1
0.700 CausalMutation group CLINVAR The demographics and distribution of type B Niemann-Pick disease: novel mutations lead to new genotype/phenotype correlations. 12369017 2002
Entrez Id: 6609
Gene Symbol: SMPD1
SMPD1
0.700 Biomarker group BEFREE Fluorescence-based selection of gene-corrected hematopoietic stem and progenitor cells from acid sphingomyelinase-deficient mice: implications for Niemann-Pick disease gene therapy and the development of improved stem cell gene transfer procedures. 9864149 1999
Entrez Id: 6609
Gene Symbol: SMPD1
SMPD1
0.700 Biomarker group BEFREE To evaluate the feasibility of somatic gene therapy for the treatment of these disorders, retroviral-mediated gene transfer was used to introduce the full-length ASM cDNA into cultured fibroblasts from two unrelated type A NPD patients. 1565614 1992