Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 65250
Gene Symbol: CPLANE1
CPLANE1
0.010 GeneticVariation disease BEFREE These variants were in the genes C5orf42 (associated with Joubert syndrome and orofaciodigital syndrome) and GYS2 (associated with glycogen synthase deficiency). 29961766 2019
Entrez Id: 2998
Gene Symbol: GYS2
GYS2
0.010 Biomarker disease BEFREE These variants were in the genes C5orf42 (associated with Joubert syndrome and orofaciodigital syndrome) and GYS2 (associated with glycogen synthase deficiency). 29961766 2019
Entrez Id: 79600
Gene Symbol: TCTN1
TCTN1
0.010 Biomarker disease BEFREE Expanding the allelic disorders linked to TCTN1 to include Varadi syndrome (Orofaciodigital syndrome type VI). 28631893 2017
Entrez Id: 164045
Gene Symbol: HFM1
HFM1
0.010 GeneticVariation disease BEFREE We report three probands from two unrelated consanguineous families of South Asian origin who all carry the same rare novel homozygous variant within the dead box helicase gene DDX59 in association with features of oral-facial-digital syndrome (OFDS). 28711741 2017
Entrez Id: 123811
Gene Symbol: FOPNL
FOPNL
0.010 GeneticVariation disease BEFREE OFIP/KIAA0753 forms a complex with OFD1 and FOR20 at pericentriolar satellites and centrosomes and is mutated in one individual with oral-facial-digital syndrome. 26643951 2016
Entrez Id: 9851
Gene Symbol: KIAA0753
KIAA0753
0.010 GeneticVariation disease BEFREE OFIP/KIAA0753 forms a complex with OFD1 and FOR20 at pericentriolar satellites and centrosomes and is mutated in one individual with oral-facial-digital syndrome. 26643951 2016
Entrez Id: 55081
Gene Symbol: IFT57
IFT57
0.010 Biomarker disease BEFREE This report identifies the implication of IFT57 in human pathology and highlights the first description of a ciliary transport defect in OFDS, extending the genetic heterogeneity of this subgroup of ciliopathies. 27060890 2016
Entrez Id: 79583
Gene Symbol: TMEM231
TMEM231
0.010 GeneticVariation disease BEFREE We identified TMEM231 mutations in orofaciodigital syndrome type 3 (OFD3) and MKS patients that compromise transition zone function. 25869670 2015
Entrez Id: 10806
Gene Symbol: SDCCAG8
SDCCAG8
0.010 Biomarker disease BEFREE We show that SDCCAG8 is localized at both centrioles and interacts directly with OFD1 (oral-facial-digital syndrome 1), which is associated with NPHP-RC. 20835237 2010
Entrez Id: 2737
Gene Symbol: GLI3
GLI3
0.010 Biomarker disease BEFREE The finding of GLI3 mutations in patients with features of oral-facial-digital syndrome supports the observation that GLI3 interacts with cilia. 20672375 2010
Entrez Id: 5092
Gene Symbol: PCBD1
PCBD1
0.010 GeneticVariation disease BEFREE This includes 19 probands (12 mutations) who fulfilled clinical criteria for GCPS or PHS, 48 probands (16 mutations) with features of GCPS or PHS but who did not meet the clinical criteria (sub-GCPS and sub-PHS), 21 probands (6 mutations) with features of PHS or GCPS and oral-facial-digital syndrome, and 5 probands (1 mutation) with nonsyndromic polydactyly. 20672375 2010
Entrez Id: 22931
Gene Symbol: RAB18
RAB18
0.200 Biomarker disease MGD ENU mutagenesis identifies mice modeling Warburg Micro Syndrome with sensory axon degeneration caused by a deletion in Rab18. 25779931 2015
Entrez Id: 22931
Gene Symbol: RAB18
RAB18
0.200 Biomarker disease MGD A novel mouse model of Warburg Micro syndrome reveals roles for RAB18 in eye development and organisation of the neuronal cytoskeleton. 24764192 2014
Entrez Id: 128637
Gene Symbol: TBC1D20
TBC1D20
0.200 Biomarker disease MGD Loss-of-function mutations in TBC1D20 cause cataracts and male infertility in blind sterile mice and Warburg micro syndrome in humans. 24239381 2013
Entrez Id: 128637
Gene Symbol: TBC1D20
TBC1D20
0.200 Biomarker disease MGD Production of fertile offspring from genetically infertile male mice. 14757819 2004
Entrez Id: 317662
Gene Symbol: FAM149B1
FAM149B1
0.310 GeneticVariation disease BEFREE We subsequently identified a third Arab consanguineous multiplex family in which the phenotype of Joubert syndrome/oral-facial-digital syndrome (OFD VI) was found to co-segregate with the same founder variant in FAM149B1. 30905400 2019
Entrez Id: 317662
Gene Symbol: FAM149B1
FAM149B1
0.310 Biomarker disease GENOMICS_ENGLAND We subsequently identified a third Arab consanguineous multiplex family in which the phenotype of Joubert syndrome/oral-facial-digital syndrome (OFD VI) was found to co-segregate with the same founder variant in FAM149B1. 30905400 2019
Entrez Id: 132320
Gene Symbol: SCLT1
SCLT1
0.320 GeneticVariation disease BEFREE Sodium channel and clathrin linker 1 (SCLT1) mutations were associated with the oral-facial-digital syndrome (OFD), an autosomal recessive ciliopathy. 28486600 2017
Entrez Id: 83479
Gene Symbol: DDX59
DDX59
0.320 GeneticVariation disease BEFREE It is only the third reported DDX59 mutation associated with OFDS reported so far. 28711741 2017
Entrez Id: 26005
Gene Symbol: C2CD3
C2CD3
0.320 GeneticVariation disease BEFREE Recently, mutations in the gene encoding the centriolar protein C2CD3 have been described in two families with a new sub-type of OFDS (OFD14), with microcephaly and cerebral malformations. 27094867 2016
Entrez Id: 132320
Gene Symbol: SCLT1
SCLT1
0.320 Biomarker disease GENOMICS_ENGLAND Ciliary genes TBC1D32/C6orf170 and SCLT1 are mutated in patients with OFD type IX. 24285566 2014
Entrez Id: 26005
Gene Symbol: C2CD3
C2CD3
0.320 Biomarker disease CTD_human The oral-facial-digital syndrome gene C2CD3 encodes a positive regulator of centriole elongation. 24997988 2014
Entrez Id: 26005
Gene Symbol: C2CD3
C2CD3
0.320 Biomarker disease BEFREE The oral-facial-digital syndrome gene C2CD3 encodes a positive regulator of centriole elongation. 24997988 2014
Entrez Id: 132320
Gene Symbol: SCLT1
SCLT1
0.320 GeneticVariation disease BEFREE The molecular composition of DAPs was recently elucidated and mutations in two genes encoding DAPs components (CEP164/NPHP15, SCLT1) have been associated with human ciliopathies, namely nephronophthisis and orofaciodigital syndrome. 24882706 2014
Entrez Id: 83479
Gene Symbol: DDX59
DDX59
0.320 Biomarker disease GENOMICS_ENGLAND Mutations in DDX59 implicate RNA helicase in the pathogenesis of orofaciodigital syndrome. 23972372 2013