Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 1280
Gene Symbol: COL2A1
COL2A1
0.500 GeneticVariation disease BEFREE Osteoarthritis in children associated with a mutation in the type II procollagen gene (COL2A1). 11708863 2001
Entrez Id: 1311
Gene Symbol: COMP
COMP
0.500 GeneticVariation disease BEFREE We discovered two rare signals that strongly associate with osteoarthritis total hip replacement: a missense variant, c.1141G>C (p.Asp369His), in the COMP gene (allelic frequency = 0.026%, P = 4.0 × 10<sup>-12</sup>, odds ratio (OR) = 16.7) and a frameshift mutation, rs532464664 (p.Val330Glyfs*106), in the CHADL gene that associates through a recessive mode of inheritance (homozygote frequency = 0.15%, P = 4.5 × 10<sup>-18</sup>, OR = 7.71). 28319091 2017
Entrez Id: 4148
Gene Symbol: MATN3
MATN3
0.500 GeneticVariation disease BEFREE We have previously shown that the mutations p.R116W and p.C299S, associated with MED and SEMD, respectively, cause retention of matrilin-3 within the endoplasmic reticulum of primary chondrocytes, while the mutation associated with osteoarthritis, p.T298M, does not hinder secretion. 20077500 2010
Entrez Id: 4148
Gene Symbol: MATN3
MATN3
0.500 GeneticVariation disease LHGDN Genomewide scan for hand osteoarthritis: a novel mutation in matrilin-3. 12736871 2003
Entrez Id: 1311
Gene Symbol: COMP
COMP
0.500 GeneticVariation disease BEFREE Mutations in the cartilage oligomeric matrix protein (COMP) gene result in pseudoachondroplasia (PSACH), which is a chondrodysplasia characterized by early-onset osteoarthritis and short stature. 11691584 2001
Entrez Id: 1280
Gene Symbol: COL2A1
COL2A1
0.500 GeneticVariation disease BEFREE The cartilage collagen genes, COL2A1, COL9A1, COL9A2, COL9A3, COL11A1 and COL11A2, were screened for sequence variations in 72 Finnish probands and one US family with primary early-onset hip and/or knee OA. 15922184 2005
Entrez Id: 7040
Gene Symbol: TGFB1
TGFB1
0.500 GeneticVariation disease GWASCAT Ten of the likely effector genes, including TGFB1 (transforming growth factor beta 1), FGF18 (fibroblast growth factor 18), CTSK (cathepsin K), and IL11 (interleukin 11), have therapeutics approved or in clinical trials, with mechanisms of action supportive of evaluation for efficacy in osteoarthritis. 30664745 2019
Entrez Id: 1280
Gene Symbol: COL2A1
COL2A1
0.500 GeneticVariation disease BEFREE Adjacent genes, for COL2A1 and the vitamin D receptor, are associated with separate features of radiographic osteoarthritis of the knee. 10902746 2000
Entrez Id: 1280
Gene Symbol: COL2A1
COL2A1
0.500 GeneticVariation disease BEFREE When we analysed OA development in Col2a1-Cre;Runx1<sup>fl/fl</sup> and Runx1<sup>fl/fl</sup> mice by surgically inducing joint instability, Cartilage degradation and osteophyte formation of Col2a1-Cre;Runx1<sup>fl/fl</sup> joints was accelerated compared with joints in Runx1<sup>fl/fl</sup> animals 8 weeks after surgery. 31113964 2019
Entrez Id: 1280
Gene Symbol: COL2A1
COL2A1
0.500 GeneticVariation disease BEFREE Insulin-like growth factor I gene promoter polymorphism, collagen type II alpha1 (COL2A1) gene, and the prevalence of radiographic osteoarthritis: the Rotterdam Study. 15082485 2004
Entrez Id: 1280
Gene Symbol: COL2A1
COL2A1
0.500 GeneticVariation disease BEFREE Type II procollagen gene (COL2A1) mutation in exon 11 associated with spondyloepiphyseal dysplasia, tall stature and precocious osteoarthritis. 7738948 1995
Entrez Id: 1280
Gene Symbol: COL2A1
COL2A1
0.500 GeneticVariation disease BEFREE A COL2A1 gene polymorphism is related with advanced stages of osteoarthritis of the knee in Mexican Mestizo population. 19756630 2010
Entrez Id: 1280
Gene Symbol: COL2A1
COL2A1
0.500 GeneticVariation disease BEFREE Follow-up with whole-exome sequencing analysis revealed a mutation c.2032G>A (p.Gly678Arg) in the COL2A1 gene (NCBI Reference Sequence: NM_001844.4), which co-segregated with the disease phenotype in this family, manifested by severe hip dysplasia and osteoarthritis. 30740902 2019
Entrez Id: 1280
Gene Symbol: COL2A1
COL2A1
0.500 GeneticVariation disease BEFREE The same allele shows reduced expression in all three patients, and this allele is more frequent in a well-defined OA population than in a control group, suggesting the possible existence of a rare COL2A1 allele that predisposes to OA. 7726176 1995
Entrez Id: 1280
Gene Symbol: COL2A1
COL2A1
0.500 GeneticVariation disease BEFREE Precocious osteoarthritis in a family with recurrent COL2A1 mutation. 16755660 2006
Entrez Id: 1280
Gene Symbol: COL2A1
COL2A1
0.500 GeneticVariation disease BEFREE To study the role of two COL2A1 single nucleotide polymorphisms (rs3737548 and rs2276455) and their haplotypes in individual susceptibility to osteoarthritis (OA) of the hand in Finnish women. 19019890 2009
Entrez Id: 8854
Gene Symbol: ALDH1A2
ALDH1A2
0.420 GeneticVariation disease BEFREE These findings indicate that the SNP rs4238326 in ALDH1A2 gene may potentially modify individual susceptibility to knee OA in the Chinese population. 28089900 2017
Entrez Id: 8854
Gene Symbol: ALDH1A2
ALDH1A2
0.420 GeneticVariation disease BEFREE Functional Characterization of the Osteoarthritis Genetic Risk Residing at ALDH1A2 Identifies rs12915901 as a Key Target Variant. 29732726 2018
Entrez Id: 8854
Gene Symbol: ALDH1A2
ALDH1A2
0.420 GeneticVariation disease GWASCAT Severe osteoarthritis of the hand associates with common variants within the ALDH1A2 gene and with rare variants at 1p31. 24728293 2014
Entrez Id: 1800
Gene Symbol: DPEP1
DPEP1
0.420 GeneticVariation disease GWASCAT Identification of new therapeutic targets for osteoarthritis through genome-wide analyses of UK Biobank data. 30664745 2019
Entrez Id: 54829
Gene Symbol: ASPN
ASPN
0.400 GeneticVariation disease BEFREE The FRZB, ASPN and CALM1 results are compelling and highlight that polymorphism in signal transduction pathways is a major component of osteoarthritis susceptibility. 16093844 2005
Entrez Id: 3553
Gene Symbol: IL1B
IL1B
0.400 GeneticVariation disease BEFREE To simulate osteoarthritis in vitro, human articular cartilage explants were placed in culture and treated with IL-1β, a cytokine with known cartilage catabolic and pro-inflammatory effects. 30679644 2019
Entrez Id: 860
Gene Symbol: RUNX2
RUNX2
0.400 GeneticVariation disease BEFREE One month following MLI, the numbers of MMP13-positive and TUNEL-positive chondrocytes were significantly greater in the articular cartilage of the RUNX2 OE joints compared to control joints and 2 months following MLI, histomorphometry and Osteoarthritis Research Society International (OARSI) scoring revealed decreased cartilage area in the RUNX2 OE joints. 31189030 2019
Entrez Id: 2487
Gene Symbol: FRZB
FRZB
0.400 GeneticVariation disease BEFREE Rare variants of sFRP3 are associated with osteoarthritis. 25846075 2015
Entrez Id: 4088
Gene Symbol: SMAD3
SMAD3
0.400 GeneticVariation disease BEFREE Mutations in SMAD3 cause a syndromic form of aortic aneurysms and dissections with early-onset osteoarthritis. 21217753 2011