Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 10058
Gene Symbol: ABCB6
ABCB6
0.010 GeneticVariation disease BEFREE The Aberrant Behavior Checklist Japanese version (ABC-J), the Food Related Problem Questionnaire (FRPQ), and the Pervasive Developmental Disorders Autism Society Japan Rating Scale (PARS) were administered to 65 PWS patients, including 20 adolescents (ages 12 to 17) and 45 young adults (ages 18 to 29). 29440778 2017
Entrez Id: 2047
Gene Symbol: EPHB1
EPHB1
0.010 AlteredExpression disease BEFREE Co-expression of EphB1 and EfnB2 in normal human dermal microvascular ECs led to the formation of PWS-like vasculatures in vitro, for example larger-diameter and thick-walled capillaries. 28599054 2017
Entrez Id: 5170
Gene Symbol: PDPK1
PDPK1
0.010 Biomarker disease BEFREE In this study, we attempted to investigate activation status of PKCα, PI3K, PDPK1 and PLC-γ and protein levels of PP2A and DAG to explore their potential roles in the formation of hypertrophic and nodular PWS lesions. 28030367 2017
Entrez Id: 1605
Gene Symbol: DAG1
DAG1
0.010 Biomarker disease BEFREE Our data showed that there is aberrant activation of PKCα, PI3K, PDPK1 and PLC-γ and upregulation of PP2A and DAG mainly in endothelial cells in hypertrophic PWS areas, but presenting in the entire vasculatures and surrounding fibroblasts in PWS nodules. 28030367 2017
Entrez Id: 55908
Gene Symbol: ANGPTL8
ANGPTL8
0.010 AlteredExpression disease BEFREE In conclusion, ANGPTL8 levels are lower in PWS than obese controls and are inversely associated with the severity of liver steatosis. 28600576 2017
Entrez Id: 1948
Gene Symbol: EFNB2
EFNB2
0.010 AlteredExpression disease BEFREE Co-expression of EphB1 and EfnB2 in normal human dermal microvascular ECs led to the formation of PWS-like vasculatures in vitro, for example larger-diameter and thick-walled capillaries. 28599054 2017
Entrez Id: 5578
Gene Symbol: PRKCA
PRKCA
0.010 Biomarker disease BEFREE Our data suggest that both PKCα and PI3K signaling pathways contribute to the development of hypertrophy and nodularity in adult PWS. 28030367 2017
Entrez Id: 3925
Gene Symbol: STMN1
STMN1
0.010 Biomarker disease BEFREE SNRPN, which codes for the RNA-binding SmN protein, is a candidate gene for Prader-Willi syndrome. 28387446 2017
Entrez Id: 6606
Gene Symbol: SMN1
SMN1
0.010 Biomarker disease BEFREE SNRPN, which codes for the RNA-binding SmN protein, is a candidate gene for Prader-Willi syndrome. 28387446 2017
Entrez Id: 414
Gene Symbol: ARSD
ARSD
0.010 Biomarker disease BEFREE Children with PWS have social-cognitive challenges that are similar to children with ASD. 28612246 2017
Entrez Id: 6607
Gene Symbol: SMN2
SMN2
0.010 Biomarker disease BEFREE SNRPN, which codes for the RNA-binding SmN protein, is a candidate gene for Prader-Willi syndrome. 28387446 2017
Entrez Id: 4670
Gene Symbol: HNRNPM
HNRNPM
0.010 Biomarker disease BEFREE These lncRNAs form a nuclear accumulation that is enriched in RNA binding proteins (RBPs) including TDP43, RBFOX2, and hnRNP M. Generation of a human PWS cellular model by depleting these lncRNAs results in altered patterns of RBPs binding and alternative splicing. 27871485 2016
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.010 Biomarker disease BEFREE In contrast to PG, 12 papulonodular lesions, which had developed in the PWSs of seven patients, showed a RAS and BRAF wild-type status. 26802240 2016
Entrez Id: 1268
Gene Symbol: CNR1
CNR1
0.010 Biomarker disease BEFREE Targeting the endocannabinoid/CB1 receptor system for treating obesity in Prader-Willi syndrome. 27900261 2016
Entrez Id: 3164
Gene Symbol: NR4A1
NR4A1
0.010 Biomarker disease BEFREE Finally, Nr4a1 may serve as a potential drug target for SNRPN-related neurodevelopmental disabilities, including Prader-Willi syndrome (PWS) and autism spectrum disorders (ASDs). 27430727 2016
Entrez Id: 4519
Gene Symbol: CYTB
CYTB
0.010 GeneticVariation disease BEFREE 15209T>C) in mitochondrial cytochrome b gene in a 2-year-old girl with Prader-Willi syndrome with a clinical history of lactic acidosis attacks, renal sodium loss, hepatopathy, progressive cerebral atrophy, and sudden death. 24771578 2015
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.010 PosttranslationalModification disease BEFREE No abnormalities were found on analysis of MECP2 gene for Rett syndrome and a DNA methylation test for Prader-Willi syndrome. 25899208 2015
Entrez Id: 367
Gene Symbol: AR
AR
0.010 GeneticVariation disease BEFREE CAG repeat length of the AR gene is a marker for increased androgen sensitivity with shorter lengths predicting smaller stature in non-PWS adult males possibly due to accelerating fusion of bone growth plates and reducing the growth phase. 25925349 2015
Entrez Id: 6352
Gene Symbol: CCL5
CCL5
0.010 AlteredExpression disease BEFREE Four of 24 plasma cytokine levels (MCP1, MDC, Eotaxin, RANTES) were significantly higher in children with PWS compared with controls and classified as bioinflammatory chemokines supporting a disturbed immune response unrelated to obesity status. 25691409 2015
Entrez Id: 1735
Gene Symbol: DIO3
DIO3
0.010 AlteredExpression disease BEFREE Subsequently, we determined that IPW, a long noncoding RNA in the critical region of the PWS locus, is a regulator of the DLK1-DIO3 region, as its overexpression in PWS and parthenogenetic iPSCs resulted in downregulation of MEGs in this locus. 24816254 2014
Entrez Id: 9883
Gene Symbol: POM121
POM121
0.010 Biomarker disease BEFREE The imprinted NPAP1 gene in the Prader-Willi syndrome region belongs to a POM121-related family of retrogenes. 24482533 2014
Entrez Id: 8788
Gene Symbol: DLK1
DLK1
0.010 GeneticVariation disease BEFREE The noncoding RNA IPW regulates the imprinted DLK1-DIO3 locus in an induced pluripotent stem cell model of Prader-Willi syndrome. 24816254 2014
Entrez Id: 551
Gene Symbol: AVP
AVP
0.010 Biomarker disease BEFREE We review how the OT and AVP systems have been investigated in Autism Spectrum Disorder (ASD), Prader-Willi Syndrome (PWS), Williams Syndrome (WS) and Fragile X syndrome (FXS). 24462936 2014
Entrez Id: 4477
Gene Symbol: MSMB
MSMB
0.010 Biomarker disease BEFREE Q-MSP can detect both PWS and AS, as well as determine the parent of origin for the allele that carries the PWS/ASCR gains. 22426236 2012
Entrez Id: 56979
Gene Symbol: PRDM9
PRDM9
0.010 GeneticVariation disease BEFREE We sequenced the PRDM9 ZF domain in 271 parents of patients with de novo microdeletions of known parental origin (velocardiofacial syndrome, the 17q21.31 microdeletion syndrome, Prader-Willi/Angelman syndrome and Williams-Beuren syndrome), and in 61 parents of individuals with a supernumerary X chromosome. 22643917 2012