Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 6687
Gene Symbol: SPG7
SPG7
0.100 GeneticVariation disease BEFREE One form of autosomal recessive HSP (on chromosome 16) is due to mutations in the paraplegin gene, which encodes a mitochondrial protein homologous to metalloproteases. 12194386 1999
Entrez Id: 51062
Gene Symbol: ATL1
ATL1
0.100 Biomarker disease BEFREE These data suggest that spastin and atlastin function in the same biochemical pathway and that it is the cytoplasmic function of spastin which is important for the pathogenesis of HSP. 16339213 2006
Entrez Id: 3798
Gene Symbol: KIF5A
KIF5A
0.100 GeneticVariation disease BEFREE By comparing the phenotypes and the complementation behaviors of a large set of Khc missense alleles, including one that is identical to a human Kif5A HSP allele, we identified three routes to suppression of Khc phenotypes: nutrient restriction, genetic background manipulation, and a remarkable intramolecular complementation between mutations known or likely to cause reciprocal changes in the rate of microtubule-stimulated ADP release by kinesin-1. 22714410 2012
Entrez Id: 6683
Gene Symbol: SPAST
SPAST
0.100 GeneticVariation disease BEFREE The Cho/Cr ratio in motor cortex (MC) of SPG4-HSP subjects was significantly lower than in controls. 19084842 2009
Entrez Id: 6683
Gene Symbol: SPAST
SPAST
0.100 GeneticVariation disease BEFREE The gene encoding spastin has a well-established association with HSP, and protrudin is a known binding partner of spastin. 22573551 2012
Entrez Id: 80208
Gene Symbol: SPG11
SPG11
0.100 Biomarker disease BEFREE Furthermore, to some extent, this new finding enriches the information on SPG11 and may provide a new basis for the genetic diagnosis of HSP. 24090761 2013
Entrez Id: 51062
Gene Symbol: ATL1
ATL1
0.100 GeneticVariation disease BEFREE A heterozygous mutation in a gene involved in an autosomal dominant HSP (ATL1/SPG3A) was also identified in one additional family. 27601211 2016
Entrez Id: 3798
Gene Symbol: KIF5A
KIF5A
0.100 GeneticVariation disease BEFREE HSP panel testing identified a novel heterozygous missense mutation in <i>KIF5A</i> (c.1086G>C, p.Lys362Asn) that segregated with the disease (SPG10). 28382308 2017
Entrez Id: 51062
Gene Symbol: ATL1
ATL1
0.100 Biomarker disease BEFREE Mutations spread across atlastin isoform 1 (atlastin-1) have been identified in patients suffering from hereditary spastic paraplegia (HSP), a neurodegenerative disorder affecting motor neuron function in the lower extremities. 21220294 2011
Entrez Id: 6683
Gene Symbol: SPAST
SPAST
0.100 GeneticVariation disease BEFREE SPG4 is the most common autosomal dominant form of HSP subtypes and is caused by mutations of the SPAST gene. 26165777 2015
Entrez Id: 6683
Gene Symbol: SPAST
SPAST
0.100 GeneticVariation disease BEFREE Inheritance of HSP is commonly autosomal dominant, spastin was identified as the defective gene in chromosome 2p-linked autosomal dominant hereditary spastic paraplegia (AD-HSP). 12023066 2002
Entrez Id: 51062
Gene Symbol: ATL1
ATL1
0.100 GeneticVariation disease BEFREE AD HSP is genetically heterogeneous, and three loci have been identified so far: SPG3 maps to chromosome 14q, SPG4 to 2p, and SPG4a to 15q. 9042923 1997
Entrez Id: 6683
Gene Symbol: SPAST
SPAST
0.100 GeneticVariation disease BEFREE Mutations in Spastic Gait 4 (SPG4), encoding spastin, are the most frequent cause of HSP. 24381312 2014
Entrez Id: 6683
Gene Symbol: SPAST
SPAST
0.100 Biomarker disease BEFREE These data suggest that spastin and atlastin function in the same biochemical pathway and that it is the cytoplasmic function of spastin which is important for the pathogenesis of HSP. 16339213 2006
Entrez Id: 6687
Gene Symbol: SPG7
SPG7
0.100 Biomarker disease BEFREE <b>Results:</b> Fifty four patients with genetically confirmed HSP diagnosis, 36 with spastic paraplegia type 4 (SPG4), 5 SPG11, 4 SPG5, 4 cerebrotendinous xanthomatosis (CTX), 3 SPG7 and 2 SPG3A, and 10 healthy, unrelated control subjects, with similar age, sex, and education participated in the study. 31231294 2019
Entrez Id: 65055
Gene Symbol: REEP1
REEP1
0.100 GeneticVariation disease BEFREE REEP1 mutations occurred in 6.5% of the patients with HSP in our sample, making it the third-most common HSP gene. 16826527 2006
Entrez Id: 6683
Gene Symbol: SPAST
SPAST
0.100 GeneticVariation disease BEFREE We performed PCR-based direct sequencing of SPG4, followed by a linkage analysis and subsequent Southern blot analysis in large Japanese kindred where 20 of 33 members were evaluated neurologically, and consequently 6 were affected with HSP. 15637712 2005
Entrez Id: 51062
Gene Symbol: ATL1
ATL1
0.100 Biomarker disease BEFREE Overall, the comparison of the clinical data for all SPG3A-HSP families reported to date failed to reveal any genotype/phenotype correlation as demonstrated for other forms of AD-HSP. 15517445 2004
Entrez Id: 3123
Gene Symbol: HLA-DRB1
HLA-DRB1
0.100 Biomarker disease BEFREE The aim was to investigate the association of HLA-DRB1 (HLA class II antigen) with HSP. 27184863 2016
Entrez Id: 51062
Gene Symbol: ATL1
ATL1
0.100 GeneticVariation disease BEFREE Our results add to a growing number of HSP disease-associated variants and confirm the high prevalence of atlastin, spastin, and REEP1 mutations in the HSP patient population. 20718791 2011
Entrez Id: 6683
Gene Symbol: SPAST
SPAST
0.100 Biomarker disease BEFREE We performed targeted next generation sequencing (NGS) in a SPAST-negative HSP sample. 23812641 2013
Entrez Id: 6683
Gene Symbol: SPAST
SPAST
0.100 GeneticVariation disease BEFREE Experiments presented here using isolated squid axoplasm reveal inhibition of FAT as a common toxic effect elicited by spastin proteins with different HSP mutations, independent of microtubule-binding or severing activity. 28398512 2017
Entrez Id: 3123
Gene Symbol: HLA-DRB1
HLA-DRB1
0.100 GeneticVariation disease BEFREE The overall odds ratios (ORs) for the three loci were significant for HSP: HLA-DRB1 01 (OR = 1.805, 95 % CI 1.259-2.588, p = 0.0012); HLA-DRB1 07 (OR = 0.671, 95 % CI 0.469-0.961, p = 0.058); HLA-DRB1 11 (OR = 2.001, 95 % CI 1.50-2.67, p = 0.027). 23325094 2013
Entrez Id: 6683
Gene Symbol: SPAST
SPAST
0.100 GeneticVariation disease BEFREE A molecular diagnosis was obtained in 82.1 % of the cases (52 cases with mutations in SPAST/SPG4, two in SPG7, and one in SPG11).The prevalence of HSP among Sardinians is high compared with other Western European populations. 24141732 2014
Entrez Id: 6683
Gene Symbol: SPAST
SPAST
0.100 GeneticVariation disease BEFREE Our results show that SPG4 mutations and deletions are a significant cause of HSP in our population and warrant SPG4 screening in AD families and selected sporadic cases. 17594340 2007