Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 3440
Gene Symbol: IFNA2
IFNA2
0.010 Biomarker disease BEFREE Interferon-α2b is FDA approved drug for the treatment of chronic HCV and HBV, melanoma, AIDS-related KS, carcinomas, hairy cell leukemia and chronic myelogenous leukemia. 31612813 2020
Entrez Id: 6531
Gene Symbol: SLC6A3
SLC6A3
0.010 GeneticVariation disease BEFREE Kaposi sarcoma in people living with HIV: incidence and associated factors in the French DAT'AIDS cohort between 2010 and 2015. 31764070 2020
Entrez Id: 5133
Gene Symbol: PDCD1
PDCD1
0.010 Biomarker disease BEFREE Programmed cell death protein 1/PD-L1 and c-Kit are targets that are useful in several tumors; their roles in ocular adnexal Kaposi Sarcoma warrant further studies. 31743287 2020
Entrez Id: 7301
Gene Symbol: TYRO3
TYRO3
0.010 Biomarker disease BEFREE Using multiplexed inhibitor bead-mass spectrometry (MIB/MS), we found Tyro3 was uniquely up-regulated and important for cell survival in primary effusion lymphoma (PEL), which is a viral lymphoma infected with Kaposi's sarcoma-associated herpesvirus (KSHV). 31346082 2019
Entrez Id: 27161
Gene Symbol: AGO2
AGO2
0.010 Biomarker disease BEFREE Here, we report the important roles of GW182 and DDX6, but not Dicer, Ago2 and DCP1A, in PB formation, and that Kaposi's sarcoma-associated herpesvirus (KSHV) lytic infection reduces PB formation through several specific interactions with viral RNA-binding protein ORF57. 31400113 2019
Entrez Id: 970
Gene Symbol: CD70
CD70
0.010 AlteredExpression disease BEFREE Kaposi sarcoma showed no CD70 expression on the tumour cells. 31652572 2019
Entrez Id: 2034
Gene Symbol: EPAS1
EPAS1
0.010 AlteredExpression disease BEFREE The results show that the KSHV ORF34 protein is involved in the KSHV life cycle by regulating the expression of HIF-1α and HIF-2α proteins.<b>IMPORTANCE</b> Hypoxia inducible factor 1α (HIF-1α) and HIF-2α are transcription factors which play important roles in the Kaposi's sarcoma-associated herpesvirus (KSHV) latent and lytic gene replication. 31189709 2019
Entrez Id: 290
Gene Symbol: ANPEP
ANPEP
0.010 AlteredExpression disease BEFREE Furthermore, CD13 expression of KS Kaposi's Sarcoma cell line and HT-29 human colon carcinoma cell line was investigated. 31820302 2019
Entrez Id: 3428
Gene Symbol: IFI16
IFI16
0.010 Biomarker disease BEFREE IFI16 knockdown disrupted the latency of Kaposi's sarcoma associated herpesvirus (KSHV) and induced lytic transcripts. 31682228 2019
Entrez Id: 55802
Gene Symbol: DCP1A
DCP1A
0.010 Biomarker disease BEFREE Here, we report the important roles of GW182 and DDX6, but not Dicer, Ago2 and DCP1A, in PB formation, and that Kaposi's sarcoma-associated herpesvirus (KSHV) lytic infection reduces PB formation through several specific interactions with viral RNA-binding protein ORF57. 31400113 2019
Entrez Id: 81622
Gene Symbol: UNC93B1
UNC93B1
0.010 Biomarker disease BEFREE Our data show that UNC93B-dependent TLR7 and TLR9 cooperate in and contribute to detection and control of MHV68 infection.<b>IMPORTANCE</b> The two human gammaherpesviruses, Epstein-Barr virus (EBV) and Kaposi's sarcoma-associated herpesvirus (KSHV), can cause aggressive forms of cancer. 30429335 2019
Entrez Id: 129868
Gene Symbol: TRIM43
TRIM43
0.010 Biomarker disease BEFREE Through RNAi screening we identified several TRIM proteins, including TRIM43, that control the reactivation of Kaposi's sarcoma-associated herpesvirus. 30420784 2019
Entrez Id: 3065
Gene Symbol: HDAC1
HDAC1
0.010 Biomarker disease BEFREE These findings advance our understanding of the mechanism of KSHV-induced pathogenesis, and providing a rationale for therapeutic targeting of the vFLIP/SAP18/HDAC1 complex as a novel strategy of AIDS-KS. 30670829 2019
Entrez Id: 3981
Gene Symbol: LIG4
LIG4
0.010 AlteredExpression disease BEFREE To enhance HDR, enabling the insertion of precise genetic modifications, we compared two strategies during surrogate reporter assays in mouse N2A cells: the suppression of DNA ligase IV, a key molecule in NHEJ, using the CasRx (Ruminococcus flavefaciens Cas13d) system, and co-expression of Kaposi's sarcoma-associated herpesvirus (KSHV) ORF52 proteins. 31519773 2019
Entrez Id: 7514
Gene Symbol: XPO1
XPO1
0.010 Biomarker disease BEFREE We performed a clustered regularly interspaced short palindromic repeat (CRISPR)-associated (Cas) screening in a unique model of matched primary and oncogenic Kaposi's sarcoma-associated herpesvirus (KSHV)-transformed cells and identified genes that were growth promoting and growth suppressive for both types of cells, among which exportin XPO1 was demonstrated to be critical for the survival of transformed cells. 31088931 2019
Entrez Id: 652968
Gene Symbol: CASTOR1
CASTOR1
0.010 Biomarker disease BEFREE Kaposi sarcoma-associated herpesvirus miRNAs suppress CASTOR1-mediated mTORC1 inhibition to promote tumorigenesis. 31305263 2019
Entrez Id: 1444
Gene Symbol: CSHL1
CSHL1
0.010 Biomarker disease BEFREE Reactivation of Kaposi's sarcoma-associated herpesvirus (KSHV) from latency requires the viral transactivator Rta to contact the host protein Jκ recombination signal-binding protein (RBP-Jκ or CSL). 31308175 2019
Entrez Id: 3383
Gene Symbol: ICAM1
ICAM1
0.010 Biomarker disease BEFREE Previously we showed that Pomalidomide (Pom) increases surface expression of major histocompatibility complex class I (MHC-I) in Kaposi sarcoma-associated herpesvirus-infected latent and lytic cells and restores ICAM-1 and B7-2 in latent cells. 30713808 2019
Entrez Id: 2308
Gene Symbol: FOXO1
FOXO1
0.010 Biomarker disease BEFREE These findings reveal that FoxO1 plays a critical role in keeping KSHV latency in check by maintaining the intracellular redox balance.<b>IMPORTANCE</b> Kaposi's sarcoma-associated herpesvirus (KSHV) is associated with several cancers, including Kaposi's sarcoma (KS). 30404794 2019
Entrez Id: 23676
Gene Symbol: SMPX
SMPX
0.010 Biomarker disease BEFREE Reactivation of Kaposi's sarcoma-associated herpesvirus (KSHV) from latency requires the viral transactivator Rta to contact the host protein Jκ recombination signal-binding protein (RBP-Jκ or CSL). 31308175 2019
Entrez Id: 10397
Gene Symbol: NDRG1
NDRG1
0.010 Biomarker disease BEFREE NDRG1 facilitates the replication and persistence of Kaposi's sarcoma-associated herpesvirus by interacting with the DNA polymerase clamp PCNA. 30811506 2019
Entrez Id: 7403
Gene Symbol: KDM6A
KDM6A
0.010 GeneticVariation disease BEFREE This study describes 5 novel variants of 7 KMT2D/KDM6A gene and summarizes the clinical manifestations and the mutational spectrum of 47 Chinese Kabuki syndrome (KS) patients. 31727177 2019
Entrez Id: 9212
Gene Symbol: AURKB
AURKB
0.010 Biomarker disease BEFREE Here, we reveal that N-cleaved isoforms of AURKB exist in several oncovirus-associated tumor cells and patient cancer tissues, including Kaposi's sarcoma-associated herpesvirus (KSHV), Epstein-Barr virus (EBV), and human papillomavirus virus (HPV). 30917319 2019
Entrez Id: 3117
Gene Symbol: HLA-DQA1
HLA-DQA1
0.010 GeneticVariation disease BEFREE For HIV-negative patients, a gene-wise comparison of allele frequencies identified the HLA-B (p = 0.008) and -DQA1 (p = 0.002) loci as possible risk factors for endemic KS. 31105266 2019
Entrez Id: 54106
Gene Symbol: TLR9
TLR9
0.010 Biomarker disease BEFREE Our data show that UNC93B-dependent TLR7 and TLR9 cooperate in and contribute to detection and control of MHV68 infection.<b>IMPORTANCE</b> The two human gammaherpesviruses, Epstein-Barr virus (EBV) and Kaposi's sarcoma-associated herpesvirus (KSHV), can cause aggressive forms of cancer. 30429335 2019