Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 10534
Gene Symbol: ZNRD2
ZNRD2
0.010 AlteredExpression disease BEFREE In particular, fibrillarin (p = 0.028), centromeric protein B (p = 0.01), centromeric autoantigen P27 (p = 0.042), and RNA polymerase II (220 kDa; p = 0.02) were significantly overexpressed in SSc fibroblasts. 11739535 2001
Entrez Id: 10269
Gene Symbol: ZMPSTE24
ZMPSTE24
0.010 Biomarker disease BEFREE Altogether our results suggest that LMNA, ZMPSTE24, and LBR sequence variations are not major genetic determinants involved in scleroderma pathogenesis. 19645629 2009
Entrez Id: 84872
Gene Symbol: ZC3H10
ZC3H10
0.100 GeneticVariation disease GWASCAT Identification of novel genetic markers associated with clinical phenotypes of systemic sclerosis through a genome-wide association strategy. 21779181 2011
Entrez Id: 84872
Gene Symbol: ZC3H10
ZC3H10
0.100 GeneticVariation disease GWASDB Identification of novel genetic markers associated with clinical phenotypes of systemic sclerosis through a genome-wide association strategy. 21779181 2011
Entrez Id: 81030
Gene Symbol: ZBP1
ZBP1
0.020 GeneticVariation disease BEFREE Here we show that e-GST is hyper-expressed in SSc patients (n = 102) and correlates (R(2) = 0.49, P < 0.0001) with the Medsger DSS and DAI Valentini indices that quantify the severity and activity of this disease. 23887627 2013
Entrez Id: 81030
Gene Symbol: ZBP1
ZBP1
0.020 Biomarker disease BEFREE TST in patients with SSc was thicker than in healthy controls (P < 0.001), and correlated positively with total mRSS and the EUSTAR-DAI and correlated negatively with disease duration (P < 0.05). 30115105 2018
Entrez Id: 7528
Gene Symbol: YY1
YY1
0.010 GeneticVariation disease BEFREE There were no associations between scleroderma and the tested RFLPs in the TCR alpha or beta genes, and no RFLPs were found in the constant region of the TCR delta gene. 1970246 1990
Entrez Id: 4904
Gene Symbol: YBX1
YBX1
0.010 AlteredExpression disease BEFREE The present study was undertaken to investigate the ability of HSc025, a novel small compound that antagonizes TGFbeta/Smad signaling through the activation of nuclear translocation of Y-box binding protein 1, to prevent tissue fibrosis in vitro or in mouse models of SSc. 19877032 2009
Entrez Id: 64132
Gene Symbol: XYLT2
XYLT2
0.300 Biomarker disease GENOMICS_ENGLAND
Entrez Id: 7518
Gene Symbol: XRCC4
XRCC4
0.010 AlteredExpression disease BEFREE These results corroborate the presence of genomic instability in SSc peripheral blood cells, as evaluated by increased DNA damage, and show that polymorphic sites of the XRCC1 and XRCC4 DNA repair genes may differentially influence DNA damage and the development of autoantibodies. 24488411 2014
Entrez Id: 7515
Gene Symbol: XRCC1
XRCC1
0.010 AlteredExpression disease BEFREE These results corroborate the presence of genomic instability in SSc peripheral blood cells, as evaluated by increased DNA damage, and show that polymorphic sites of the XRCC1 and XRCC4 DNA repair genes may differentially influence DNA damage and the development of autoantibodies. 24488411 2014
Entrez Id: 6375
Gene Symbol: XCL1
XCL1
0.010 AlteredExpression disease LHGDN Elevation of serum lymphotactin levels in patients with systemic sclerosis. 18322986 2008
Entrez Id: 7486
Gene Symbol: WRN
WRN
0.110 Biomarker disease HPO
Entrez Id: 7486
Gene Symbol: WRN
WRN
0.110 AlteredExpression disease LHGDN Significant elevation of IgG anti-WRN (RecQ3 RNA/DNA helicase) antibody in systemic sclerosis. 16906373 2006
Entrez Id: 7473
Gene Symbol: WNT3
WNT3
0.010 GeneticVariation disease BEFREE We found a significant association between INT4, (GT)n polymorphisms (p = 0.006 and 0.027, respectively), and SSc. 17876529 2008
Entrez Id: 7471
Gene Symbol: WNT1
WNT1
0.010 AlteredExpression disease BEFREE The accumulation of β-catenin resulted from increased expression of Wnt-1 and Wnt-10b in SSc. 22328737 2012
Entrez Id: 65125
Gene Symbol: WNK1
WNK1
0.010 Biomarker disease BEFREE Attempts to elucidate whether interactions between Sp1/Sp3/c-Krox and p65 are necessary to mediate the NF-κB inhibitory effect on COL1A1 in ANF and SF were carried out; in this regard, immunoprecipitation assays revealed that they interact, and this was validated by re-ChIP. 22139845 2012
Entrez Id: 11197
Gene Symbol: WIF1
WIF1
0.010 AlteredExpression disease BEFREE Preventing the accumulation of reactive oxygen species or inhibiting the activation of ATM, c-Jun, or HDACs restored WIF-1 expression in cultured SSc patient cells. 25185156 2014
Entrez Id: 55717
Gene Symbol: WDR11
WDR11
0.020 Biomarker disease BEFREE Significantly increased frequencies of HLA-DR3 (36% vs 5%), HLA-DR7 (9% vs 4%), HLA-DR11 (36% vs 7%) and HLA-DRw53 (23% vs 5%) were observed in SSc-RA compared with RA patients (P < 0.05). 17384178 2007
Entrez Id: 55717
Gene Symbol: WDR11
WDR11
0.020 Biomarker disease BEFREE Furthermore, the sharing of the particular amino acid sequence: valine38 and phenylalanine67-lysine68-glutamic acid69-asparic acid70-arginine71, by DRB5*0102, DRB1*0802 and DR11 (associated with Caucasian PSS) also suggests a contribution of the sequence in HLA-DR molecules to the pathogenesis of PSS according to the shared epitope hypothesis. 8064726 1994
Entrez Id: 7450
Gene Symbol: VWF
VWF
0.040 Biomarker disease BEFREE Moreover, the hunt for molecular underpinnings of the broad array of vascular lesions in SSc has to include von Willebrand factor and endoglin. 28217887 2017
Entrez Id: 7450
Gene Symbol: VWF
VWF
0.040 AlteredExpression disease BEFREE Confocal microscopy identified cells displaying simultaneous expression of von Willebrand factor and α-smooth muscle actin in small and medium-sized arterioles in the SSc lung tissue but not in normal control lungs. 26360820 2016
Entrez Id: 7450
Gene Symbol: VWF
VWF
0.040 AlteredExpression disease BEFREE The plasma levels of VWF and VWFpp were significantly elevated in patients with SSc having ILD. 29130325 2018
Entrez Id: 7450
Gene Symbol: VWF
VWF
0.040 Biomarker disease BEFREE Patients with SSc had higher Hcy and vWF concentrations than those with RP (p < 0.01 and p < 0.02, respectively) or controls (p < 0.02 and p < 0.0001, respectively). 11093443 2000
Entrez Id: 7448
Gene Symbol: VTN
VTN
0.010 AlteredExpression disease BEFREE On the other hand, serum vitronectin levels were lower in the SSc group than in the SLE and HC groups (p < 0.001 for both). 29264880 2017