Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 6403
Gene Symbol: SELP
SELP
0.030 AlteredExpression disease LHGDN 20 scleroderma patients with severe Raynaud phenomenon, under aspirin treatment, were evaluated by quantitative flow-cytometry for PAM (P-selectin, GPIIbIIIa, CD40L) in correlation with scleroderma activity and severity, systemic endothelial dysfunction (flow-mediated vasodilatation), systemic inflammation (serum CRP and IL-6) and cold-provocation test. 18333373 2007
Entrez Id: 1401
Gene Symbol: CRP
CRP
0.100 AlteredExpression disease LHGDN 20 scleroderma patients with severe Raynaud phenomenon, under aspirin treatment, were evaluated by quantitative flow-cytometry for PAM (P-selectin, GPIIbIIIa, CD40L) in correlation with scleroderma activity and severity, systemic endothelial dysfunction (flow-mediated vasodilatation), systemic inflammation (serum CRP and IL-6) and cold-provocation test. 18333373 2007
Entrez Id: 49
Gene Symbol: ACR
ACR
0.100 Biomarker disease BEFREE 2013 ACR/EULAR systemic sclerosis classification criteria in patients with associated pulmonary arterial hypertension. 29126717 2018
Entrez Id: 7038
Gene Symbol: TG
TG
0.010 Biomarker disease BEFREE 301 patients with systemic lupus erythematosus (SLE), 210 with rheumatoid arthritis (RA), 58 with scleroderma (SSc) and 80 with spondyloarthritis (SpA) were studied regarding thyroid function (TSH and T4), anti-thyroglobulin (TgAb) and anti-thyroperoxidase (TPOab) and compared with 141 healthy controls. 29267515 2018
Entrez Id: 7173
Gene Symbol: TPO
TPO
0.010 Biomarker disease BEFREE 301 patients with systemic lupus erythematosus (SLE), 210 with rheumatoid arthritis (RA), 58 with scleroderma (SSc) and 80 with spondyloarthritis (SpA) were studied regarding thyroid function (TSH and T4), anti-thyroglobulin (TgAb) and anti-thyroperoxidase (TPOab) and compared with 141 healthy controls. 29267515 2018
Entrez Id: 114086
Gene Symbol: DBA2
DBA2
0.020 GeneticVariation disease BEFREE 42 DBA/2 strain mice were included in the study: healthy mice and mice with established scleroderma, treated with high or medium dose of UVA1.Non-treated groups served as control. 29120857 2018
Entrez Id: 6736
Gene Symbol: SRY
SRY
0.020 Biomarker disease BEFREE 46, XX SRY-positive male syndrome presenting with primary hypogonadism in the setting of scleroderma. 20841307 2011
Entrez Id: 6722
Gene Symbol: SRF
SRF
0.030 Biomarker disease BEFREE 5-Aryl-1,3,4-oxadiazol-2-ylthioalkanoic Acids: A Highly Potent New Class of Inhibitors of Rho/Myocardin-Related Transcription Factor (MRTF)/Serum Response Factor (SRF)-Mediated Gene Transcription as Potential Antifibrotic Agents for Scleroderma. 30951312 2019
Entrez Id: 7040
Gene Symbol: TGFB1
TGFB1
0.100 Biomarker disease BEFREE 5-HT<sub>2</sub> and 5-HT<sub>2B</sub> antagonists attenuate pro-fibrotic phenotype in human adult dermal fibroblasts by blocking TGF-β1 induced non-canonical signaling pathways including STAT3 : implications for fibrotic diseases like scleroderma. 30207074 2018
Entrez Id: 6774
Gene Symbol: STAT3
STAT3
0.050 Biomarker disease BEFREE 5-HT<sub>2</sub> and 5-HT<sub>2B</sub> antagonists attenuate pro-fibrotic phenotype in human adult dermal fibroblasts by blocking TGF-β1 induced non-canonical signaling pathways including STAT3 : implications for fibrotic diseases like scleroderma. 30207074 2018
Entrez Id: 49
Gene Symbol: ACR
ACR
0.100 GeneticVariation disease BEFREE 50 patients, all fulfilling the ACR SSc criteria (19 with limited and 31 with diffused skin involvement) were evaluated using a 1.5T MR scanner. 29164584 2017
Entrez Id: 3123
Gene Symbol: HLA-DRB1
HLA-DRB1
0.100 GeneticVariation disease BEFREE Systemic scleroderma in Greece: low mortality and strong linkage with HLA-DRB1*1104 allele. 10784518 2000
Entrez Id: 1490
Gene Symbol: CCN2
CCN2
0.400 Biomarker disease BEFREE Scleroderma lung fibroblasts and normal lung fibroblasts treated with CTGF demonstrated increased rate of migration in a wound healing assay. 18676875 2008
Entrez Id: 22915
Gene Symbol: MMRN1
MMRN1
0.070 Biomarker disease BEFREE Systemic sclerosis (SSc) is an autoimmune connective tissue disease characterised by skin and internal organs fibrosis due to accumulation of extra cellular matrix (ECM) proteins. 25549087 2014
Entrez Id: 3428
Gene Symbol: IFI16
IFI16
0.010 Biomarker disease BEFREE Scleroderma patients who are double-positive for antibodies recognizing CENP and IFI-16 are significantly more likely to have significant digital vascular events during the course of their disease. 27389713 2017
Entrez Id: 406947
Gene Symbol: MIR155
MIR155
0.050 Biomarker disease BEFREE Systemic sclerosis (SSc) is a pro-fibrotic condition with a poorly understood aetiology.Evidence presented by Artlett et al. in this issue suggests that the microRNA miR-155 is key, with its involvement dependent on the NLRP3 inflammasome. 28923085 2017
Entrez Id: 114548
Gene Symbol: NLRP3
NLRP3
0.030 GeneticVariation disease BEFREE Systemic sclerosis (SSc) is a pro-fibrotic condition with a poorly understood aetiology.Evidence presented by Artlett et al. in this issue suggests that the microRNA miR-155 is key, with its involvement dependent on the NLRP3 inflammasome. 28923085 2017
Entrez Id: 6352
Gene Symbol: CCL5
CCL5
0.040 AlteredExpression disease BEFREE Scleroderma keratinocytes exhibited increased expression of NF-κB-regulated cytokines and chemokines and lesional skin staining confirmed upregulation of CCL5 in basal keratinocytes. 28968684 2017
Entrez Id: 50506
Gene Symbol: DUOX2
DUOX2
0.010 AlteredExpression disease BEFREE Systemic sclerosis (SSc) is a multisystem autoimmune disease: characterised from the clinical side by progressive vasculopathy and fibrosis of the skin and different organs and from the biochemical side by fibroblast deregulation with excessive production of collagen and increased expression of nicotinamide adenine dinucleotide phosphate oxidase 4 (NOX4). 30226391 2018
Entrez Id: 53905
Gene Symbol: DUOX1
DUOX1
0.010 AlteredExpression disease BEFREE Systemic sclerosis (SSc) is a multisystem autoimmune disease: characterised from the clinical side by progressive vasculopathy and fibrosis of the skin and different organs and from the biochemical side by fibroblast deregulation with excessive production of collagen and increased expression of nicotinamide adenine dinucleotide phosphate oxidase 4 (NOX4). 30226391 2018
Entrez Id: 2969
Gene Symbol: GTF2I
GTF2I
0.020 GeneticVariation disease BEFREE Scleroderma Patient-centered Intervention Network-Scleroderma Support group Leader EDucation (SPIN-SSLED) program: non-randomised feasibility trial. 31719073 2019
Entrez Id: 10927
Gene Symbol: SPIN1
SPIN1
0.010 GeneticVariation disease BEFREE Scleroderma Patient-centered Intervention Network-Scleroderma Support group Leader EDucation (SPIN-SSLED) program: non-randomised feasibility trial. 31719073 2019
Entrez Id: 1490
Gene Symbol: CCN2
CCN2
0.400 Biomarker disease BEFREE Connective tissue growth factor (CTGF) is a member of an emerging CCN gene family that is implicated in various diseases associated with fibro-proliferative disorder including scleroderma and atherosclerosis. 10601320 1999
Entrez Id: 3569
Gene Symbol: IL6
IL6
0.100 Biomarker disease BEFREE Interleukin-6 (IL-6) is an important immunoregulatory cytokine that has been implicated in a number of fibrotic autoimmune diseases such as scleroderma, interstitial nephritis, and pulmonary interstitial fibrosis. 10720455 2000
Entrez Id: 5229
Gene Symbol: PGGT1B
PGGT1B
0.010 AlteredExpression disease BEFREE GGTI-298 caused a dose-dependent inhibition of type I collagen production and a reduction in the steady-state levels of alpha1(I), alpha2(I), and alpha1(III) mRNA in normal and SSc cells. 10902768 2000