Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 5063
Gene Symbol: PAK3
PAK3
0.010 GeneticVariation disease BEFREE The HLA antigens were determined in 54 Caucasoid patients with scleroderma (ARA criteria). 6593111 1984
Entrez Id: 2200
Gene Symbol: FBN1
FBN1
0.300 Biomarker disease MGD Mast cells and their degranulation in the Tsk mouse model of scleroderma. 4048170 1985
Entrez Id: 5236
Gene Symbol: PGM1
PGM1
0.010 Biomarker disease BEFREE We studied the frequencies of red cell enzyme types, AcP, PGM1 and EsD in 213 patients with rheumatoid arthritis (RA), systemic lupus erythematosus (SLE), rheumatic heart disease (RHD), scleroderma (Scl) and psoriatic arthropathy (PsA). 3157636 1985
Entrez Id: 2200
Gene Symbol: FBN1
FBN1
0.300 Biomarker disease MGD Increased collagen biosynthesis and increased expression of type I and type III procollagen genes in tight skin (TSK) mouse fibroblasts. 2416757 1986
Entrez Id: 3447
Gene Symbol: IFNA13
IFNA13
0.090 Biomarker disease BEFREE These findings indicate that rec gamma-IFN can modulate the excessive collagen biosynthesis characteristic of PSS fibroblasts and that this effect can be explained largely by the gamma-IFN-mediated decrease in specific collagen mRNAs. 3091039 1986
Entrez Id: 3439
Gene Symbol: IFNA1
IFNA1
0.090 Biomarker disease BEFREE These findings indicate that rec gamma-IFN can modulate the excessive collagen biosynthesis characteristic of PSS fibroblasts and that this effect can be explained largely by the gamma-IFN-mediated decrease in specific collagen mRNAs. 3091039 1986
Entrez Id: 5265
Gene Symbol: SERPINA1
SERPINA1
0.010 GeneticVariation disease BEFREE We used isoelectric focusing on ultrathin gels to determine the common M subtypes as well as other variants of alpha 1-antitrypsin in 62 white patients with rheumatoid arthritis (RA) and 51 white patients with systemic sclerosis (SSc). 3487321 1986
Entrez Id: 1278
Gene Symbol: COL1A2
COL1A2
0.400 AlteredExpression disease BEFREE Elevated pro alpha 2(I) collagen mRNA levels in cultured scleroderma fibroblasts result from an increased transcription rate of the corresponding gene. 3582658 1987
Entrez Id: 1281
Gene Symbol: COL3A1
COL3A1
0.210 AlteredExpression disease BEFREE Procollagen gene expression by scleroderma fibroblasts in culture. Inhibition of collagen production and reduction of pro alpha 1(I) and pro alpha 1(III) collagen messenger RNA steady-state levels by retinoids. 3580008 1987
Entrez Id: 55599
Gene Symbol: RNPC3
RNPC3
0.100 Biomarker disease BEFREE Human scleroderma antiserum specific to nucleolar U3 RNP can enrich snR17 from sonicated yeast nuclear extracts. 3308452 1987
Entrez Id: 2335
Gene Symbol: FN1
FN1
0.100 Biomarker disease BEFREE All the scleroderma fibroblast lines produced increased amounts of type I and type III collagens and fibronectin during the early passages. 3592743 1987
Entrez Id: 3458
Gene Symbol: IFNG
IFNG
0.100 AlteredExpression disease BEFREE A 72-h exposure to interferon-gamma reduced procollagen mRNA levels in the scleroderma fibroblast lines to the levels exhibited by the unaffected control fibroblasts. 3122841 1988
Entrez Id: 4609
Gene Symbol: MYC
MYC
0.010 AlteredExpression disease BEFREE Therefore, to investigate the molecular basis of growth in scleroderma, we compared expression of c-myc gene in scleroderma and control cells. 3078955 1988
Entrez Id: 26039
Gene Symbol: SS18L1
SS18L1
0.100 Biomarker disease BEFREE DNA-DR typing shows HLA-DRw11 RFLPs are increased in frequency in both progressive systemic sclerosis and CREST variants of scleroderma. 2568026 1989
Entrez Id: 26039
Gene Symbol: SS18L1
SS18L1
0.100 GeneticVariation disease BEFREE Furthermore, an inordinately high rate of Y chromosome aneuploidy was found in the CREST scleroderma patient. 2912883 1989
Entrez Id: 2335
Gene Symbol: FN1
FN1
0.100 Biomarker disease BEFREE Mutant fibronectin gene in skin fibroblasts of sclerotic lesions from patients with progressive systemic sclerosis. 2930599 1989
Entrez Id: 26039
Gene Symbol: SS18L1
SS18L1
0.100 Biomarker disease BEFREE HLA-DR5 is significantly increased in frequency in this series of CREST/PSS patients compared to controls (P less than 0.001), and log linear regression analysis showed that although both DR5 and Gm homozygosity were significant factors determining disease susceptibility, there was no evidence of an interactive effect between these two groups of genes increasing the predisposition to CREST/PSS. 2570039 1989
Entrez Id: 7150
Gene Symbol: TOP1
TOP1
0.090 Biomarker disease BEFREE Determination of an epitope of the diffuse systemic sclerosis marker antigen DNA topoisomerase I: sequence similarity with retroviral p30gag protein suggests a possible cause for autoimmunity in systemic sclerosis. 2479024 1989
Entrez Id: 1278
Gene Symbol: COL1A2
COL1A2
0.400 AlteredExpression disease BEFREE Full thickness biopsies of affected skin and fascia from one patient with diffuse fasciitis and eosinophilia (DF), two patients with generalized morphea (GM), and five patients with progressive systemic sclerosis (PSS) of recent onset were examined for the expression of transforming growth factor beta 1 (TGF beta 1) and type I procollagen genes by in situ hybridization with human sequence-specific cDNA. 2307855 1990
Entrez Id: 1277
Gene Symbol: COL1A1
COL1A1
0.100 AlteredExpression disease BEFREE Co-localization of transforming growth factor beta 2 with alpha 1(I) procollagen mRNA in tissue sections of patients with systemic sclerosis. 1697606 1990
Entrez Id: 7040
Gene Symbol: TGFB1
TGFB1
0.100 Biomarker disease BEFREE However, from these studies, we cannot implicate TGF beta 1 in the pathogenesis of skin fibrosis in PSS. 2307855 1990
Entrez Id: 26039
Gene Symbol: SS18L1
SS18L1
0.100 Biomarker disease BEFREE Autoantibodies from a patient with scleroderma CREST recognized kinetochores of the higher plant Haemanthus. 2185478 1990
Entrez Id: 3458
Gene Symbol: IFNG
IFNG
0.100 Biomarker disease BEFREE In addition, interferon gamma (IFN-gamma) inhibits the constitutively increased collagen synthesis characteristic of fibroblasts derived from lesions of patients with scleroderma. 2258640 1990
Entrez Id: 3383
Gene Symbol: ICAM1
ICAM1
0.090 Biomarker disease BEFREE The increase in the number of ICAM-1-high fibroblasts in scleroderma patients may facilitate T cell activation and lymphokine production, and thus indirectly contribute to the fibrotic process. 1979737 1990
Entrez Id: 7042
Gene Symbol: TGFB2
TGFB2
0.030 AlteredExpression disease BEFREE TGF-beta 2 mRNA was found to be co-localized with pro alpha 1(I) collagen expression around dermal blood vessels in all patients with the inflammatory stage of SSc, whereas there was no expression of either gene in the dermis of patients in the fibrotic stage, the SLE patients or the normal controls. 1697606 1990