Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 6904
Gene Symbol: TBCD
TBCD
0.610 GeneticVariation phenotype BEFREE The biallelic pathogenic variants of TBCD gene were reported to be associated with severe degenerative encephalopathy accompanied with seizures previously. 31240573 2019
Entrez Id: 6904
Gene Symbol: TBCD
TBCD
0.610 Biomarker phenotype HPO
Entrez Id: 6904
Gene Symbol: TBCD
TBCD
0.610 Biomarker phenotype CTD_human We report that biallelic mutations in TBCD, encoding one of the five co-chaperones required for assembly and disassembly of the αβ-tubulin heterodimer, the structural unit of microtubules, cause a disease with neurodevelopmental and neurodegenerative features characterized by early-onset cortical atrophy, secondary hypomyelination, microcephaly, thin corpus callosum, developmental delay, intellectual disability, seizures, optic atrophy, and spastic quadriplegia. 27666370 2016
Entrez Id: 6904
Gene Symbol: TBCD
TBCD
0.610 Biomarker phenotype GENOMICS_ENGLAND Biallelic TBCD Mutations Cause Early-Onset Neurodegenerative Encephalopathy. 27666374 2016
Entrez Id: 2593
Gene Symbol: GAMT
GAMT
0.600 Biomarker phenotype CTD_human Guanidinoacetate methyltransferase deficiency identified in adults and a child with mental retardation. 15651030 2005
Entrez Id: 2593
Gene Symbol: GAMT
GAMT
0.600 Biomarker phenotype HPO
Entrez Id: 2593
Gene Symbol: GAMT
GAMT
0.600 Biomarker phenotype GENOMICS_ENGLAND Guanidinoacetate methyltransferase (GAMT) deficiency: outcomes in 48 individuals and recommendations for diagnosis, treatment and monitoring. 24268530 2014
Entrez Id: 3785
Gene Symbol: KCNQ2
KCNQ2
0.500 CausalMutation phenotype CLINVAR Genetic testing in benign familial epilepsies of the first year of life: clinical and diagnostic significance. 23360469 2013
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.500 GeneticVariation phenotype BEFREE Electroencephalographic (EEG) and seizure types occurring in MECP2 DS have been poorly investigated. 30642617 2019
Entrez Id: 3785
Gene Symbol: KCNQ2
KCNQ2
0.500 GeneticVariation phenotype BEFREE Variable expressivity of a likely pathogenic variant in KCNQ2 in a three-generation pedigree presenting with intellectual disability with childhood onset seizures. 28602030 2017
Entrez Id: 3785
Gene Symbol: KCNQ2
KCNQ2
0.500 GeneticVariation phenotype BEFREE Adult Kcnq2(A306T/+) and Kcnq3(G311V/+) heterozygous knock-in mice exhibited reduced thresholds to electrically induced seizures compared to wild-type littermate mice. 18483067 2008
Entrez Id: 6792
Gene Symbol: CDKL5
CDKL5
0.500 GeneticVariation phenotype BEFREE Mutations in the CDKL5 gene have been associated with the early-onset seizure variant of Rett syndrome and mutations in FOXG1 have been associated with the congenital Rett syndrome variant. 22968132 2013
Entrez Id: 6792
Gene Symbol: CDKL5
CDKL5
0.500 GeneticVariation phenotype BEFREE In addition to a FOXG1 mutation in a patient with all core features of the congenital variant of RTT, we identified a missense (p.Ser240Thr) in CDKL5 in a patient who appeared to be seizure free. 27062609 2017
Entrez Id: 3785
Gene Symbol: KCNQ2
KCNQ2
0.500 CausalMutation phenotype CLINVAR Mouse models of human KCNQ2 and KCNQ3 mutations for benign familial neonatal convulsions show seizures and neuronal plasticity without synaptic reorganization. 18483067 2008
Entrez Id: 3785
Gene Symbol: KCNQ2
KCNQ2
0.500 GeneticVariation phenotype BEFREE In seven patients with BNFCs and no recurrence of seizures, a novel two-base-pair deletion (1369del2) was identified within the coding sequence of the KCNQ2 gene. 15030501 2004
Entrez Id: 3785
Gene Symbol: KCNQ2
KCNQ2
0.500 GeneticVariation phenotype LHGDN In seven patients with BNFCs and no recurrence of seizures, a novel two-base-pair deletion (1369del2) was identified within the coding sequence of the KCNQ2 gene. 15030501 2004
Entrez Id: 3785
Gene Symbol: KCNQ2
KCNQ2
0.500 GeneticVariation phenotype BEFREE Based on seizure frequency at onset and cognitive outcome, we delineated 3 clinical subgroups, expanding the spectrum of KCNQ2 encephalopathy to patients with moderate intellectual disability and/or infrequent seizures at onset. 24107868 2013
Entrez Id: 3785
Gene Symbol: KCNQ2
KCNQ2
0.500 CausalMutation phenotype CLINVAR A novel potassium channel gene, KCNQ2, is mutated in an inherited epilepsy of newborns. 9425895 1998
Entrez Id: 3785
Gene Symbol: KCNQ2
KCNQ2
0.500 CausalMutation phenotype CLINVAR Novel KCNQ2 and KCNQ3 mutations in a large cohort of families with benign neonatal epilepsy: first evidence for an altered channel regulation by syntaxin-1A. 24375629 2014
Entrez Id: 627
Gene Symbol: BDNF
BDNF
0.500 Biomarker phenotype BEFREE Several studies suggest that brain-derived neurotrophic factor (BDNF) can exacerbate seizure development during status epilepticus (S.E.) and subsequent epileptogenesis in the adult brain. 14643774 2003
Entrez Id: 6792
Gene Symbol: CDKL5
CDKL5
0.500 GeneticVariation phenotype BEFREE Epilepsy with mutation of the CDKL5 gene causes early seizures and is a variant of Rett syndrome (MIM (312750), which is reported typically as infantile spasms. 16326141 2006
Entrez Id: 627
Gene Symbol: BDNF
BDNF
0.500 Biomarker phenotype CTD_human PRI-2191 alone had no effect on gene expression, but it enhanced the seizure-evoked expression of HSP-70, had an opposite effect on BDNF mRNA level and did not affect prepro-TRH mRNA level. 15781040 2005
Entrez Id: 627
Gene Symbol: BDNF
BDNF
0.500 GeneticVariation phenotype BEFREE Individuals with the p.R168X mutation and heterozygous for the BDNF polymorphism were also at an increased risk of seizure onset (hazard ratio 5.3, 95% confidence interval 1.6-17.7) compared with those homozygous for the wild-type BDNF allele. 19349604 2009
Entrez Id: 7248
Gene Symbol: TSC1
TSC1
0.500 GeneticVariation phenotype BEFREE Evidence from experimental research shows that encephalopathy in TSC might have a genetic cause, and mTOR activation caused by TSC gene mutation can be directly responsible for the early appearance of seizures and encephalopathy. 26758984 2016
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.500 Biomarker phenotype HPO