Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 3106
Gene Symbol: HLA-B
HLA-B
0.020 Biomarker disease BEFREE These preferences are shared with HLA-B*27 and Mamu-B*008, molecules shown to be involved in elite control in human HIV type 1 and macaque SIV infections, respectively. 29021373 2017
Entrez Id: 3456
Gene Symbol: IFNB1
IFNB1
0.020 Biomarker disease BEFREE In primary primate macrophages, the main cell type implicated in HIV and SIV infection in the CNS, specific miRNAs reduce, whereas miRNA inhibitors enhance, IFN-beta protein production. 20130213 2010
Entrez Id: 3600
Gene Symbol: IL15
IL15
0.020 Biomarker disease BEFREE Other work investigating the IL-15 superagonist ALT-803 (now N803) may also provide a recourse for enhancing NK cell responses in the context of the immunosuppressive and inflammatory environment of chronic HIV/SIV infections, leading to enhanced control of viremia. 30730588 2019
Entrez Id: 7852
Gene Symbol: CXCR4
CXCR4
0.020 Biomarker disease BEFREE In this study, we characterized the development and function of CCR5<sup>+</sup>CD8<sup>+</sup> T cells in rhesus macaques with or without Simian immunodeficiency virus (SIV) infection. 31034775 2019
Entrez Id: 3586
Gene Symbol: IL10
IL10
0.020 Biomarker disease BEFREE Furthermore, AFB1 promoted the polarization of SIV-infected PAMs to the M1 phenotype at 8 hpi and to the M2 phenotype at 24 hpi, as measured by the increases in IL-10 expression and in the number of CD206-positive PAMs as well as by the morphological changes observed by scanning electron microscopy. 30196302 2018
Entrez Id: 3627
Gene Symbol: CXCL10
CXCL10
0.020 AlteredExpression disease BEFREE Investigating its role in SIV-infection revealed that FAM26F was upregulated after infection (P<0.0008), but did not directly correlate with viral load in contrast to MX1 and CXCL10. 27902344 2016
Entrez Id: 3456
Gene Symbol: IFNB1
IFNB1
0.020 Biomarker disease BEFREE Interferon-beta (IFN-beta) and myxovirus A (MxA) mRNA are produced in the brain during acute SIV infection. 16518758 2006
Entrez Id: 6962
Gene Symbol: TRBV20OR9-2
TRBV20OR9-2
0.020 Biomarker disease BEFREE Results show that whereas SIV infection leads to the loss of Vbeta TCR heterogeneity in disease susceptible RM, the CD4+ T cells from SM retain their degree of Vbeta TCR heterogeneity, suggesting that the mechanism(s) of SIV induced CD4+ T cell loss maybe distinct in these 2 species and contribute to the differences in the clinical outcome. 17889219 2007
Entrez Id: 10410
Gene Symbol: IFITM3
IFITM3
0.020 Biomarker disease BEFREE However, information on the role of IFITM3 in SIV infection of rhesus macaques is currently lacking. 28257482 2017
Entrez Id: 10663
Gene Symbol: CXCR6
CXCR6
0.020 Biomarker disease BEFREE CXCR6 is a chemokine receptor and the primary coreceptor in SIV infection. 12761559 2003
Entrez Id: 55329
Gene Symbol: MNS1
MNS1
0.020 Biomarker disease BEFREE Overall, we demonstrate that MNS1 deficiency in humans causes laterality defects (situs inversus) and likely male infertility and that MNS1 plays a role in the ODA-DC assembly. 30148830 2018
Entrez Id: 6899
Gene Symbol: TBX1
TBX1
0.020 Biomarker disease BEFREE Background Reduced ventricular function and decreased exercise capacity are widespread in adults with complete transposition of the great arteries after atrial switch ( TGA -Mustard/Senning) and congenitally corrected TGA (cc TGA ). 30371262 2018
Entrez Id: 7454
Gene Symbol: WAS
WAS
0.020 AlteredExpression disease BEFREE Finally, while Δ<sup>9</sup>-THC did not affect the levels of CD4<sup>+</sup> T cells, it significantly reduced absolute CD8<sup>+</sup> T cell numbers in peripheral blood at 14 and 150 days post-SIV infection. 31114576 2019
Entrez Id: 3586
Gene Symbol: IL10
IL10
0.020 AlteredExpression disease BEFREE The profiles were significantly different during primary SIV infection in macaques (SIVmac); that is, there was a delayed increase in IL-10 levels accompanied by moderate and persistent increases in TGF-beta levels. 15761496 2005
Entrez Id: 115948
Gene Symbol: CCDC151
CCDC151
0.020 GeneticVariation disease BEFREE Correction: Whole-exome sequencing identifies a novel CCDC151 mutation, c.325GT (p.E109X), in a patient with primary ciliary dyskinesia and situs inversus. 31178588 2019
Entrez Id: 3574
Gene Symbol: IL7
IL7
0.020 AlteredExpression disease BEFREE Having previously shown that pharmaceutical injection of interleukin-7 (IL-7) triggers chemokine expression in many organs leading to massive T-cell homing, in particular to the intestine, we here explored mucosal IL-7 expression as part of the cytokine storm occurring during the acute phase of SIV infection in rhesus macaques. 28579989 2017
Entrez Id: 55329
Gene Symbol: MNS1
MNS1
0.020 GeneticVariation disease BEFREE MNS1 variant associated with situs inversus and male infertility. 31534215 2020
Entrez Id: 6962
Gene Symbol: TRBV20OR9-2
TRBV20OR9-2
0.020 AlteredExpression disease BEFREE TCR triggering transcriptionally downregulates CCR5 expression on rhesus macaque CD4(+) T-cells with no measurable effect on susceptibility to SIV infection. 21035160 2011
Entrez Id: 6899
Gene Symbol: TBX1
TBX1
0.020 Biomarker disease BEFREE Women with CHD such as pulmonary hypertension (Eisenmenger syndrome), severe left ventricular outflow stenosis, cyanotic CHD, aortopathy, Fontan procedure and systemic right ventricle (complete transposition of the great arteries [TGA] after atrial switch, congenitally corrected TGA) carry a high-risk. 29625509 2018
Entrez Id: 3627
Gene Symbol: CXCL10
CXCL10
0.020 Biomarker disease BEFREE Concentrations of biomarkers of acute and chronic inflammation such as soluble CD14, CXCL10, IL-6 and TNF-α are known to be elevated following SIV infection of young adult macaques of several species, but concentrations of these biomarkers did not shift after SIV infection in aged RM-Ch and remained similar to mock-infected macaques. 29391069 2018
Entrez Id: 7454
Gene Symbol: WAS
WAS
0.020 Biomarker disease BEFREE Finally, the ability of Δ(9)-THC to block the miR-150-IRAK1 regulatory cascade highlights the potential of cannabinoids to inhibit persistent inflammation/immune activation in HIV/SIV infection. 26937033 2016
Entrez Id: 2657
Gene Symbol: GDF1
GDF1
0.010 GeneticVariation disease BEFREE Klippel-Feil syndrome associated with situs inversus: description of a new case and exclusion of GDF1, GDF3 and GDF6 as causal genes. 22522086 2012
Entrez Id: 2214
Gene Symbol: FCGR3A
FCGR3A
0.010 AlteredExpression disease BEFREE Acute SIV infection was associated with increased FcγRIII expression which subsequently declined with disease progression. 31333668 2019
Entrez Id: 23411
Gene Symbol: SIRT1
SIRT1
0.010 Biomarker disease BEFREE Our data suggests that Sirt-1-inflammatory gene silencing is disturbed by SIV infection, resembling aging in brains. 29280055 2018
Entrez Id: 4882
Gene Symbol: NPR2
NPR2
0.010 Biomarker disease BEFREE In this review, we discussed the epigenetic regulation of GC responses, especially for GC B and Tfh cell under normal state or HIV/SIV infection. 29449847 2018