Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 2903
Gene Symbol: GRIN2A
GRIN2A
0.310 Biomarker group CTD_human Here we demonstrate that about 20% of cases of LKS, CSWSS and electroclinically atypical rolandic epilepsy often associated with speech impairment can have a genetic origin sustained by de novo or inherited mutations in the GRIN2A gene (encoding the N-methyl-D-aspartate (NMDA) glutamate receptor α2 subunit, GluN2A). 23933820 2013
Entrez Id: 2903
Gene Symbol: GRIN2A
GRIN2A
0.310 GeneticVariation group BEFREE Here we demonstrate that about 20% of cases of LKS, CSWSS and electroclinically atypical rolandic epilepsy often associated with speech impairment can have a genetic origin sustained by de novo or inherited mutations in the GRIN2A gene (encoding the N-methyl-D-aspartate (NMDA) glutamate receptor α2 subunit, GluN2A). 23933820 2013
Entrez Id: 3098
Gene Symbol: HK1
HK1
0.300 Biomarker group GENOMICS_ENGLAND Prevalence and architecture of de novo mutations in developmental disorders. 28135719 2017
Entrez Id: 84879
Gene Symbol: MFSD2A
MFSD2A
0.300 Biomarker group CTD_human A partially inactivating mutation in the sodium-dependent lysophosphatidylcholine transporter MFSD2A causes a non-lethal microcephaly syndrome. 26005865 2015
Entrez Id: 7274
Gene Symbol: TTPA
TTPA
0.300 Biomarker group CTD_human Ataxia caused by mutations in the alpha-tocopherol transfer protein gene. 10896705 2000
Entrez Id: 57492
Gene Symbol: ARID1B
ARID1B
0.130 GeneticVariation group BEFREE The mutations were associated with syndromic ID and speech impairment (severe/profound in SMARCB1, SMARCE1, and ARID1A mutations; variable in SMARCA4, SMARCA2, and ARID1B mutations), which was frequently accompanied by agenesis or hypoplasia of the corpus callosum. 23637025 2013
Entrez Id: 57492
Gene Symbol: ARID1B
ARID1B
0.130 Biomarker group BEFREE Phenotype-genotype comparison of the translocation patient to seven unpublished patients with various sized deletions encompassing ARID1B confirms that haploinsufficiency of ARID1B is associated with CC abnormalities, intellectual disability, severe speech impairment, and autism. 21801163 2012
Entrez Id: 57492
Gene Symbol: ARID1B
ARID1B
0.130 GeneticVariation group BEFREE Taken together with published data, these results indicate that haploinsufficiency of the ARID1B gene, which encodes an epigenetic modifier of chromatin structure, is an important cause of CSS and is potentially a common cause of intellectual disability and speech impairment. 22426309 2012
Entrez Id: 57492
Gene Symbol: ARID1B
ARID1B
0.130 GeneticVariation group CLINVAR
Entrez Id: 10522
Gene Symbol: DEAF1
DEAF1
0.120 GeneticVariation group BEFREE Mutations affecting the SAND domain of DEAF1 cause intellectual disability with severe speech impairment and behavioral problems. 24726472 2014
Entrez Id: 10522
Gene Symbol: DEAF1
DEAF1
0.120 GeneticVariation group BEFREE Intellectual disability: novel mutations in DEAF1 cause speech impairment and behavioral problems. 25091821 2014
Entrez Id: 10522
Gene Symbol: DEAF1
DEAF1
0.120 Biomarker group HPO
Entrez Id: 10847
Gene Symbol: SRCAP
SRCAP
0.110 GeneticVariation group BEFREE This is the first report of a 16p11.2 deletion completely removing one copy of SRCAP, suggesting that haploinsufficiency of this gene could be associated to speech impairment, global developmental delay, behavioural problems and few subtle phenotypic features resembling FHS. 25451714 2015
Entrez Id: 6598
Gene Symbol: SMARCB1
SMARCB1
0.110 GeneticVariation group BEFREE The mutations were associated with syndromic ID and speech impairment (severe/profound in SMARCB1, SMARCE1, and ARID1A mutations; variable in SMARCA4, SMARCA2, and ARID1B mutations), which was frequently accompanied by agenesis or hypoplasia of the corpus callosum. 23637025 2013
Entrez Id: 10847
Gene Symbol: SRCAP
SRCAP
0.110 Biomarker group HPO
Entrez Id: 6598
Gene Symbol: SMARCB1
SMARCB1
0.110 Biomarker group HPO
Entrez Id: 93986
Gene Symbol: FOXP2
FOXP2
0.100 GeneticVariation group BEFREE Here we provide comprehensive behavioural and neuroimaging data on a large novel family where one parent and 11 children presented with features of childhood apraxia of speech (the same speech disorder associated with FOXP2 variants). 30796815 2019
Entrez Id: 49855
Gene Symbol: SCAPER
SCAPER
0.100 CausalMutation group CLINVAR SCAPER localizes to primary cilia and its mutation affects cilia length, causing Bardet-Biedl syndrome. 30723319 2019
Entrez Id: 93986
Gene Symbol: FOXP2
FOXP2
0.100 GeneticVariation group BEFREE In humans, mutations in FOXP1 and FOXP2 have been implicated in cognitive deficits including intellectual disability and speech disorders. 30753188 2019
Entrez Id: 93986
Gene Symbol: FOXP2
FOXP2
0.100 GeneticVariation group BEFREE It also renders song learning and production inaccurate and imprecise, similar to the speech impairment of patients carrying FOXP2 mutations. 28488276 2017
Entrez Id: 4286
Gene Symbol: MITF
MITF
0.100 CausalMutation group CLINVAR Prevalence of MITF p.E318K in Patients With Melanoma Independent of the Presence of CDKN2A Causative Mutations. 26650189 2016
Entrez Id: 4286
Gene Symbol: MITF
MITF
0.100 CausalMutation group CLINVAR Molecular characterization of melanoma cases in Denmark suspected of genetic predisposition. 25803691 2015
Entrez Id: 93986
Gene Symbol: FOXP2
FOXP2
0.100 Biomarker group BEFREE We identified three truncated genes: CDH12, DGKB and FOXP2, confirming the role of FOXP2 in severe speech disorder, and suggestive roles of CDH12 and/or DGKB for the global developmental and psychomotor delay. 23860044 2014
Entrez Id: 93986
Gene Symbol: FOXP2
FOXP2
0.100 AlteredExpression group BEFREE Expression patterns of speech disorder- (FoxP2, FoxP1, CNTNAP2, and CMIP) and dyslexia- (ROBO1, DCDC2, and KIAA0319) related genes were analyzed. 24769279 2014
Entrez Id: 4286
Gene Symbol: MITF
MITF
0.100 CausalMutation group CLINVAR Prevalence of the E318K MITF germline mutation in Italian melanoma patients: associations with histological subtypes and family cancer history. 23167872 2013