Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 1636
Gene Symbol: ACE
ACE
0.010 GeneticVariation disease BEFREE We screened 37 AD, 8 mild cognitive impairment (MCI), 3 AD and CVD (cerebrovascular disease), 3 MCI and CVD, 8 frontotemporal dementia (FTD) and 2 progressive supranuclear palsy (PSP) patients, and 28 normal controls (NCs).We sequenced PSEN1, PSEN2 and APP (EOAD risk factors), as well as MAPT, GRN and TARDBP for all cases and NCs, and analysed the APOE, CLU, CR1 and PICALM genotypes as well as the MAPT and ACE haplotypes (LOAD risk factors) for the AD (n = 37) and AD + MCI (n = 45) cases and NCs (n = 28).We identified variants in PSEN1, PSEN2 and TARDBP across a range of phenotypes (AD, AD and CVD, FTD and PSP), suggesting that screening of all known candidate genes of Alzheimer's and non-Alzheimer's forms of dementias in all dementia cases might be warranted. 26159191 2015
Entrez Id: 309
Gene Symbol: ANXA6
ANXA6
0.010 Biomarker disease BEFREE Here, we report that protein levels of the Rho-associated protein kinases (ROCK1 and ROCK2), p70 S6 kinase (S6K), and mammalian target of rapamycin (mTOR) were increased in PSP and CBD brains. 26818518 2016
Entrez Id: 161
Gene Symbol: AP2A2
AP2A2
0.010 Biomarker disease BEFREE Double-label immunofluorescence studies showed that AP2A2 protein often colocalized with neurofibrillary tangles in LOAD but was not colocalized with pTau proteinopathy in progressive supranuclear palsy, or with TDP-43 proteinopathy. 31748784 2020
Entrez Id: 348
Gene Symbol: APOE
APOE
0.100 GeneticVariation disease BEFREE In spite of the ApoE immunoreactivity associated with NFTs, in PSP the ApoE allele frequency was comparable with that of age-matched normal controls. 7675243 1995
Entrez Id: 348
Gene Symbol: APOE
APOE
0.100 GeneticVariation disease BEFREE To explore possible phenotypic implications, we studied common tau and ApoE gene polymorphisms, associated with Alzheimer's disease (AD), progressive supranuclear palsy (PSP) and PD, in a clinically and pathologically characterized cohort of PD patients and aged control subjects. 17204369 2007
Entrez Id: 348
Gene Symbol: APOE
APOE
0.100 Biomarker disease BEFREE However, no effect of alpha-synuclein, synphilin, or APOE variability on the development of PSP, or of tau, alpha-synuclein, APOE, or synphilin gene variability on the development of MSA, are demonstrated. 11134398 2000
Entrez Id: 348
Gene Symbol: APOE
APOE
0.100 Biomarker disease BEFREE The objective of this study was to investigate the effect of genes previously identified as risk alleles, including microtubule-associated protein tau, myelin-associated oligodendrocyte basic protein, eukaryotic translation initiation factor 2-alpha kinase 3, and syntaxin 6, as well as apolipoprotein E, on cognitive function in progressive supranuclear palsy. 29076559 2017
Entrez Id: 348
Gene Symbol: APOE
APOE
0.100 GeneticVariation disease BEFREE Apolipoprotein E (ApoE) genotyping was conducted in sporadic Alzheimer's disease (AD, n = 91) as well as in other dementing disorders including Parkinson's disease (PD, n = 73), autopsy-confirmed diffuse Lewy body disease (DLBD, n = 16), progressive supranuclear palsy (n = 13), vascular dementia (n = 55), alcoholic dementia (n =25) and normal control subjects (n = 77). 9187933 1997
Entrez Id: 348
Gene Symbol: APOE
APOE
0.100 Biomarker disease BEFREE Apolipoprotein E in progressive supranuclear palsy in Japan. 9246676 1997
Entrez Id: 348
Gene Symbol: APOE
APOE
0.100 GeneticVariation disease BEFREE Some APOE or tau gene polymorphisms have been associated with Alzheimer's disease (AD), progressive supranuclear palsy (PSP) and Parkinson's disease (PD). 18930114 2008
Entrez Id: 348
Gene Symbol: APOE
APOE
0.100 Biomarker disease BEFREE APOE genotyping was performed in patients with probable Alzheimer's disease (AD) (n=504), frontotemporal dementia (FTD) (n=47), vascular dementia (VaD) (n=152), mixed dementia (n=132), mild cognitive impairment (MCI) (n=44), Parkinson's disease (PD) (n=30), dementia with Lewy bodies (DLB) (n=17), and multisystem atrophy (MSA)/progressive supranuclear palsy (PSP) (n=12). 12876259 2003
Entrez Id: 348
Gene Symbol: APOE
APOE
0.100 Biomarker disease BEFREE Effect of MAPT and APOE on prognosis of progressive supranuclear palsy. 16839689 2006
Entrez Id: 348
Gene Symbol: APOE
APOE
0.100 GeneticVariation disease BEFREE Finally, we identify an association between the APOE ε2/ε2 genotype and risk of tauopathies using two series of pathologically-confirmed cases of PSP and corticobasal degeneration. 30348994 2018
Entrez Id: 348
Gene Symbol: APOE
APOE
0.100 Biomarker disease BEFREE Tremor, psychosis, early dementia, asymmetric findings, absence of H1 haplotype, and presence of APOE epsilon4 should raise questions about a diagnosis of PSP. 14502669 2003
Entrez Id: 348
Gene Symbol: APOE
APOE
0.100 GeneticVariation disease BEFREE Normal distribution of apolipoprotein E alleles in progressive supranuclear palsy. 8780111 1996
Entrez Id: 348
Gene Symbol: APOE
APOE
0.100 Biomarker disease BEFREE APOE epsilon4 is a risk factor for Alzheimer type pathology in PSP. 12552038 2003
Entrez Id: 351
Gene Symbol: APP
APP
0.020 GeneticVariation disease BEFREE In the present study, we analysed autophagic and lysosomal markers in human post-mortem brain samples from patients with early-onset familial AD (FAD) with the APP Swedish mutation (APPswe), CBD and PSP and control individuals. 26936765 2016
Entrez Id: 351
Gene Symbol: APP
APP
0.020 Biomarker disease BEFREE We screened 37 AD, 8 mild cognitive impairment (MCI), 3 AD and CVD (cerebrovascular disease), 3 MCI and CVD, 8 frontotemporal dementia (FTD) and 2 progressive supranuclear palsy (PSP) patients, and 28 normal controls (NCs).We sequenced PSEN1, PSEN2 and APP (EOAD risk factors), as well as MAPT, GRN and TARDBP for all cases and NCs, and analysed the APOE, CLU, CR1 and PICALM genotypes as well as the MAPT and ACE haplotypes (LOAD risk factors) for the AD (n = 37) and AD + MCI (n = 45) cases and NCs (n = 28).We identified variants in PSEN1, PSEN2 and TARDBP across a range of phenotypes (AD, AD and CVD, FTD and PSP), suggesting that screening of all known candidate genes of Alzheimer's and non-Alzheimer's forms of dementias in all dementia cases might be warranted. 26159191 2015
Entrez Id: 100506084
Gene Symbol: ARL17B
ARL17B
0.010 Biomarker disease BEFREE MOBP, LRRC37A4, ARL17A and ARL17B warrant further assessment as candidate PSP risk genes. 27115769 2016
Entrez Id: 50807
Gene Symbol: ASAP1
ASAP1
0.100 GeneticVariation disease GWASCAT Joint genome-wide association study of progressive supranuclear palsy identifies novel susceptibility loci and genetic correlation to neurodegenerative diseases. 30089514 2018
Entrez Id: 171023
Gene Symbol: ASXL1
ASXL1
0.010 Biomarker disease BEFREE The IPD-MDS PSP-RS and PSP-P criteria were unable to distinguish the PSP-RS from the PSP-P phenotypes in this sample. 31665686 2019
Entrez Id: 6311
Gene Symbol: ATXN2
ATXN2
0.020 Biomarker disease BEFREE ATXN2 repeat lengths in patients with PSP and FTD were found to be similar to the controls. 25098532 2014
Entrez Id: 6311
Gene Symbol: ATXN2
ATXN2
0.020 Biomarker disease BEFREE In conclusion, our findings confirm the role of ATXN2 as an important risk factor for ALS and support the hypothesis that expanded ATXN2 repeats may predispose to other neurodegenerative diseases, including progressive supranuclear palsy. 21610160 2011
Entrez Id: 102723619
Gene Symbol: ATXN2-AS
ATXN2-AS
0.010 Biomarker disease BEFREE In conclusion, our findings confirm the role of ATXN2 as an important risk factor for ALS and support the hypothesis that expanded ATXN2 repeats may predispose to other neurodegenerative diseases, including progressive supranuclear palsy. 21610160 2011
Entrez Id: 6315
Gene Symbol: ATXN8OS
ATXN8OS
0.010 GeneticVariation disease BEFREE Two patients with progressive supranuclear palsy (PSP) had mutations in the ATXN8OS gene. 29916049 2019