Source: ALL
Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 3918
Gene Symbol: LAMC2
LAMC2
0.030 Biomarker disease BEFREE CSF-TPPA reactivity and titer were determined for a convenience sample of 191 CSF samples from individuals enrolled in a study of CSF abnormalities in syphilis (training data set). 28381602 2017
Entrez Id: 1437
Gene Symbol: CSF2
CSF2
0.030 Biomarker disease BEFREE CSF-TPPA reactivity and titer were determined for a convenience sample of 191 CSF samples from individuals enrolled in a study of CSF abnormalities in syphilis (training data set). 28381602 2017
Entrez Id: 6822
Gene Symbol: SULT2A1
SULT2A1
0.030 Biomarker disease BEFREE STD testing results showed that 9.0% (294/3251) of the syphilis tests were positive, and 8.3% (803/9719) of the chlamydia/gonorrhea tests were positive. 30807464 2019
Entrez Id: 7535
Gene Symbol: ZAP70
ZAP70
0.030 Biomarker disease BEFREE STD testing results showed that 9.0% (294/3251) of the syphilis tests were positive, and 8.3% (803/9719) of the chlamydia/gonorrhea tests were positive. 30807464 2019
Entrez Id: 1234
Gene Symbol: CCR5
CCR5
0.010 GeneticVariation disease BEFREE A total of 16 single-nucleotide polymorphisms (SNPs) in eight genes (interleukin [IL]-17A, IL-17F, IL-23R, VDR, C-C motif chemokine ligand [CCL] 2, CCL5, C-C chemokine receptor [CCR] 2, and CCR5) were analyzed in 188 patients with syphilis and 216 healthy controls. 30171709 2018
Entrez Id: 4035
Gene Symbol: LRP1
LRP1
0.010 Biomarker disease BEFREE Also, history of genital ulcer (APR: 2.19; p = 0.019), STI history (APR: 1.74; p = 0.033) and number of sexual partners in the last year (APR: 1.02; p = 0.044) were associated with active syphilis. 29952395 2018
Entrez Id: 5366
Gene Symbol: PMAIP1
PMAIP1
0.010 Biomarker disease BEFREE Also, history of genital ulcer (APR: 2.19; p = 0.019), STI history (APR: 1.74; p = 0.033) and number of sexual partners in the last year (APR: 1.02; p = 0.044) were associated with active syphilis. 29952395 2018
Entrez Id: 1834
Gene Symbol: DSPP
DSPP
0.010 Biomarker disease BEFREE As part of the World Health Organization pre-qualification of in vitro diagnostics assessment, the laboratory performance of four dual HIV-Syphilis rapid diagnostic tests (SD Bioline HIV/Syphilis Duo, DPP HIV-Syphilis Assay, Multiplo Rapid TP/HIV Antibody Test and Insti Multiplex HIV-1/HIV-2/Syphilis Antibody Test) was assessed using a well characterized multiregional panel of stored sera specimens. 30606108 2019
Entrez Id: 8066
Gene Symbol: ANC
ANC
0.030 AlteredExpression disease BEFREE Barriers for the implementation of syphilis testing and treatment were identified at the a) system level: fragmentation of the health system, existence of ANC guidelines in conflict with proposed intervention, poor accessibility of clinics (geographical and functional), staff and product shortages at the PCCs; b) healthcare providers' level: lack of knowledge and training about evolving best practices, reservations regarding same-day screening and treatment; c) Pregnant women level: late enrollment in ANC, lack of knowledge about consequences and treatment of syphilis, and stigma. 28807019 2017
Entrez Id: 345
Gene Symbol: APOC3
APOC3
0.010 Biomarker disease BEFREE Biomarker analysis revealed three proteins (Apo-A1, Apo-CIII, CRP) that differed between syphilis and other causes. 31697216 2019
Entrez Id: 1401
Gene Symbol: CRP
CRP
0.010 Biomarker disease BEFREE Biomarker analysis revealed three proteins (Apo-A1, Apo-CIII, CRP) that differed between syphilis and other causes. 31697216 2019
Entrez Id: 2147
Gene Symbol: F2
F2
0.010 Biomarker disease BEFREE CBFP and pAPS subjects had longer prothrombin times (P < 0.001) and activated partial thromboplastin times (APTTs, P < 0.001) but lower fibrinogen concentrations (P = 0.022) and platelet counts (P < 0.001) than syphilis patients. 30005228 2018
Entrez Id: 3576
Gene Symbol: CXCL8
CXCL8
0.020 AlteredExpression disease BEFREE Corrigendum: Treponema pallidum (syphilis) antigen TpF1 induces angiogenesis through the activation of the IL-8 pathway. 29449640 2018
Entrez Id: 3586
Gene Symbol: IL10
IL10
0.010 AlteredExpression disease BEFREE CSF IL-10 levels were significantly higher in patients with neurosyphilis when compared to those with syphilis but not neurosyphilis. 26100683 2015
Entrez Id: 8013
Gene Symbol: NR4A3
NR4A3
0.010 GeneticVariation disease BEFREE Despite the completion of the Treponema pallidum genome project, only minor genetic differences have been found between the subspecies that cause venereal syphilis (ssp. pallidum) and the nonvenereal diseases yaws (ssp. pertenue) and bejel (ssp. endemicum). 18554302 2008
Entrez Id: 51428
Gene Symbol: DDX41
DDX41
0.020 Biomarker disease BEFREE Donors VDRL>8, EIA+ and FTA-ABS+ carry the risk of syphilis infectivity even in concomitance to antibodies detection. 24877236 2014
Entrez Id: 1406
Gene Symbol: CRX
CRX
0.010 Biomarker disease BEFREE Five electronic databases were searched (PubMed, EMBASE, CRD, Cochrane Library and LILACS) to March 2016 for diagnostic accuracy studies of ICS test and standard reference tests for syphilis in pregnant women. 29467132 2018
Entrez Id: 6103
Gene Symbol: RPGR
RPGR
0.010 Biomarker disease BEFREE Five electronic databases were searched (PubMed, EMBASE, CRD, Cochrane Library and LILACS) to March 2016 for diagnostic accuracy studies of ICS test and standard reference tests for syphilis in pregnant women. 29467132 2018
Entrez Id: 196
Gene Symbol: AHR
AHR
0.010 Biomarker disease BEFREE For early syphilis, TR was associated with a higher nadir CD4+ cell count (adjusted hazard ratio [AHR], 1.06; <i>P</i> = .029), an RPR titer >1:32 at diagnosis (AHR, 1.26; <i>P</i> = .009), secondary syphilis (AHR, 1.29; <i>P</i> = .008), and cases of syphilis diagnosed in more recent calendar years (AHR, 1.36; <i>P</i> < .0001). 30631790 2019
Entrez Id: 57016
Gene Symbol: AKR1B10
AKR1B10
0.020 GeneticVariation disease BEFREE From September 2009 to August 2013, we collected 658 clinical specimens from 375 patients who presented with syphilis for genotyping to examine the number of 60-bp repeats in the acidic repeat protein (arp) gene, T. pallidum repeat (tpr) polymorphism, and tp0548 gene, and to detect A2058G and A2059G point mutations by restriction fragment length polymorphism. 24438059 2014
Entrez Id: 10139
Gene Symbol: ARFRP1
ARFRP1
0.020 GeneticVariation disease BEFREE From September 2009 to August 2013, we collected 658 clinical specimens from 375 patients who presented with syphilis for genotyping to examine the number of 60-bp repeats in the acidic repeat protein (arp) gene, T. pallidum repeat (tpr) polymorphism, and tp0548 gene, and to detect A2058G and A2059G point mutations by restriction fragment length polymorphism. 24438059 2014
Entrez Id: 7873
Gene Symbol: MANF
MANF
0.020 GeneticVariation disease BEFREE From September 2009 to August 2013, we collected 658 clinical specimens from 375 patients who presented with syphilis for genotyping to examine the number of 60-bp repeats in the acidic repeat protein (arp) gene, T. pallidum repeat (tpr) polymorphism, and tp0548 gene, and to detect A2058G and A2059G point mutations by restriction fragment length polymorphism. 24438059 2014
Entrez Id: 167
Gene Symbol: CRISP1
CRISP1
0.020 GeneticVariation disease BEFREE From September 2009 to August 2013, we collected 658 clinical specimens from 375 patients who presented with syphilis for genotyping to examine the number of 60-bp repeats in the acidic repeat protein (arp) gene, T. pallidum repeat (tpr) polymorphism, and tp0548 gene, and to detect A2058G and A2059G point mutations by restriction fragment length polymorphism. 24438059 2014
Entrez Id: 473
Gene Symbol: RERE
RERE
0.020 GeneticVariation disease BEFREE From September 2009 to August 2013, we collected 658 clinical specimens from 375 patients who presented with syphilis for genotyping to examine the number of 60-bp repeats in the acidic repeat protein (arp) gene, T. pallidum repeat (tpr) polymorphism, and tp0548 gene, and to detect A2058G and A2059G point mutations by restriction fragment length polymorphism. 24438059 2014
Entrez Id: 1437
Gene Symbol: CSF2
CSF2
0.030 Biomarker disease BEFREE He was confirmed neurosyphilis according to the CSF tests for syphilis. 28056870 2017