Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 129831
Gene Symbol: RBM45
RBM45
0.030 Biomarker disease BEFREE Multiple comparison procedures applied within each HLA locus demonstrated significant correlations between the ancestral suprahaplotype A1 B8 DRB1*0301 DRB3*0101 DQA1*0501 and thymic hyperplasia and between HLA-A24 and thymoma. 10370374 1999
Entrez Id: 4049
Gene Symbol: LTA
LTA
0.020 Biomarker disease BEFREE Patients without thymoma who had the titin antibody had the same high frequency of TNFA*T1 and TNFB*2 as patients with thymoma, whereas patients without the titin antibody carried the same allele, TNFA*T2 and TNFB*1, regardless of age and thymic disease. 10199335 1999
Entrez Id: 3125
Gene Symbol: HLA-DRB3
HLA-DRB3
0.010 Biomarker disease BEFREE Multiple comparison procedures applied within each HLA locus demonstrated significant correlations between the ancestral suprahaplotype A1 B8 DRB1*0301 DRB3*0101 DQA1*0501 and thymic hyperplasia and between HLA-A24 and thymoma. 10370374 1999
Entrez Id: 7432
Gene Symbol: VIP
VIP
0.010 Biomarker disease BEFREE Functional expression of receptors for calcitonin gene-related peptide, calcitonin, and vasoactive intestinal peptide in the human thymus and thymomas from myasthenia gravis patients. 9973484 1999
Entrez Id: 796
Gene Symbol: CALCA
CALCA
0.010 Biomarker disease BEFREE Functional expression of receptors for calcitonin gene-related peptide, calcitonin, and vasoactive intestinal peptide in the human thymus and thymomas from myasthenia gravis patients. 9973484 1999
Entrez Id: 100124696
Gene Symbol: TEC
TEC
0.010 Biomarker disease BEFREE The molecular and functional expression of serpentine membrane receptors for vasoactive intestinal peptide (VIP), calcitonin gene-related peptide (CGRP), and calcitonin (CT) were characterized in human thymus and thymomas from myasthenia gravis (MG) patients and thymic epithelial cells either in primary culture (PTEC) or transformed by the simian virus 40 large T (SV40LT) oncogene (LT-TEC). 9973484 1999
Entrez Id: 1493
Gene Symbol: CTLA4
CTLA4
0.060 GeneticVariation disease BEFREE We previously reported that alleles with longer PCR products (designated as allele xx) in an (AT)n polymorphism in Ctla-4 are associated with myasthenia gravis with thymoma, while the shortest allele, 86, is negatively associated with the disease. 10713366 2000
Entrez Id: 3458
Gene Symbol: IFNG
IFNG
0.050 AlteredExpression disease BEFREE Intercellular adhesion molecule-1 was up-regulated in the thymoma TEC to a level similar to normal TEC in response to IFN-gamma. 10886240 2000
Entrez Id: 6772
Gene Symbol: STAT1
STAT1
0.020 GeneticVariation disease BEFREE A gel mobility shift assay however, revealed translocation of STAT1 to the nucleus in thymoma as well as normal TEC. 10886240 2000
Entrez Id: 940
Gene Symbol: CD28
CD28
0.010 AlteredExpression disease BEFREE We confirmed here this hypothesis by transfecting the cDNA of the human CD28 molecule in the BW5147 thymoma which lacks CD3 surface expression. 11163393 2000
Entrez Id: 972
Gene Symbol: CD74
CD74
0.010 Biomarker disease BEFREE Neoplastic epithelial cells in 88% of thymic carcinomas (15/17), 70% of invasive thymomas (14/20), but only 33% of benign thymomas (9/27) were immunoreactive for CD74. 10981873 2000
Entrez Id: 6750
Gene Symbol: SST
SST
0.010 Biomarker disease BEFREE Specific binding of [125I-Tyr11] SS-14 was found on a membrane preparation of the surgically removed thymoma. 10770220 2000
Entrez Id: 7292
Gene Symbol: TNFSF4
TNFSF4
0.010 Biomarker disease BEFREE OX40, expressed in a fraction of activated CD4+ T cells, may be upregulated in thymic tissues adjacent to GC and thymoma in MG, and OX40 may interact with OX40L in GC to enhance anti-acetylcholine receptor antibody production in MG. 11071109 2000
Entrez Id: 7293
Gene Symbol: TNFRSF4
TNFRSF4
0.010 Biomarker disease BEFREE OX40, expressed in a fraction of activated CD4+ T cells, may be upregulated in thymic tissues adjacent to GC and thymoma in MG, and OX40 may interact with OX40L in GC to enhance anti-acetylcholine receptor antibody production in MG. 11071109 2000
Entrez Id: 3383
Gene Symbol: ICAM1
ICAM1
0.010 AlteredExpression disease BEFREE Intercellular adhesion molecule-1 was up-regulated in the thymoma TEC to a level similar to normal TEC in response to IFN-gamma. 10886240 2000
Entrez Id: 970
Gene Symbol: CD70
CD70
0.010 Biomarker disease BEFREE In a series of 27 thymic epithelial tumors, including thymic carcinomas (n = 8), atypical thymomas (n = 5), thymomas (n = 13), and thymic carcinoid (n = 1), 7 (88%) thymic carcinomas and 1 (20%) atypical thymoma showed positive immunoreactivity for CD70, whereas CD70 was not detected in other tumors. 10800994 2000
Entrez Id: 3123
Gene Symbol: HLA-DRB1
HLA-DRB1
0.040 GeneticVariation disease BEFREE The DRB1*03 allele was absent in patients with thymoma; however, in comparison with controls, occurrence of this marker was frequent in MG patients (p<0.005; RR=6.2), more frequent in females (p<0.005; RR=7.8) and most frequent in EOMG female patients (p<0.005; RR=15.1). 11574100 2001
Entrez Id: 129831
Gene Symbol: RBM45
RBM45
0.030 GeneticVariation disease BEFREE The DRB1*03 allele was absent in patients with thymoma; however, in comparison with controls, occurrence of this marker was frequent in MG patients (p<0.005; RR=6.2), more frequent in females (p<0.005; RR=7.8) and most frequent in EOMG female patients (p<0.005; RR=15.1). 11574100 2001
Entrez Id: 3558
Gene Symbol: IL2
IL2
0.030 Biomarker disease BEFREE In our study, a unique IL-2 dependent human T cell line, designated TY8-3, was established from a thymoma obtained from a myasthenia gravis patient. 11149427 2001
Entrez Id: 9112
Gene Symbol: MTA1
MTA1
0.010 AlteredExpression disease BEFREE Thus our results show that the expression of the MTA1 gene is closely related to invasiveness in thymoma. 11689291 2001
Entrez Id: 1956
Gene Symbol: EGFR
EGFR
0.100 Biomarker disease BEFREE Five-micron sections of formalin-fixed, paraffin-embedded tumor (28 invasive and/or metastatic thymomas, six thymic carcinomas, and three non-invasive thymomas) were stained with anti-EGFR. 11935304 2002
Entrez Id: 4005
Gene Symbol: LMO2
LMO2
0.010 AlteredExpression disease BEFREE We now show that Lmo2 expression is augmented in tumour endothelium such as mouse thymomas and human lung tumours. 11857074 2002
Entrez Id: 1040
Gene Symbol: CDS1
CDS1
0.010 Biomarker disease BEFREE The frequency of allele G and genotype G/G at position +49 in CDS1 was increased in patients with thymoma when compared with patients with normal and hyperplastic thymic histopathology. 11857062 2002
Entrez Id: 973
Gene Symbol: CD79A
CD79A
0.010 AlteredExpression disease BEFREE Immunohistochemical staining was also performed on human thymus and thymoma to investigate the normality of CD79a expression, to discover that low-level expression of CD79a is common in thymocytes and thymoma-associated lymphocytes. 12115880 2002
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.360 Biomarker disease BEFREE LOHs were also seen at the adenomatous polyposis coli (APC) locus (5q21-22) in subsets of these thymomas, whereas combined LOHs at the APC, retinoblastoma (13q14.3), and p53 (17p13.1) loci were confined to a subset of B3 thymomas that had possibly evolved from APC-hemizygous B2 thymomas by tumor progression; indeed, thymomas combing B2 plus B3 features are common. 12839963 2003