Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 5826
Gene Symbol: ABCD4
ABCD4
0.300 Biomarker disease CTD_human Mutations in ABCD4 cause a new inborn error of vitamin B12 metabolism. 22922874 2012
Entrez Id: 81693
Gene Symbol: AMN
AMN
0.100 Biomarker disease HPO
Entrez Id: 81693
Gene Symbol: AMN
AMN
0.100 CausalMutation disease CLINVAR
Entrez Id: 582
Gene Symbol: BBS1
BBS1
0.100 CausalMutation disease CLINVAR
Entrez Id: 811
Gene Symbol: CALR
CALR
0.200 Biomarker disease RGD Maternal micronutrient deficiency leads to alteration in the kidney proteome in rat pups. 25982389 2015
Entrez Id: 2694
Gene Symbol: CBLIF
CBLIF
0.050 Biomarker disease BEFREE High frequency of anti-parietal cell antibody (APCA) and intrinsic factor blocking antibody (IFBA) in individuals with severe vitamin B12 deficiency - an observational study in primary care patients. 31714882 2020
Entrez Id: 2694
Gene Symbol: CBLIF
CBLIF
0.050 Biomarker disease BEFREE Cubulin mutations cause a hereditary form of megaloblastic anemia secondary to vitamin B(12) deficiency, and proteinuria occurs in 50% of cases since cubilin is coreceptor for both the intestinal vitamin B(12)-intrinsic factor complex and the tubular reabsorption of protein in the proximal tubule. 21903995 2011
Entrez Id: 2694
Gene Symbol: CBLIF
CBLIF
0.050 Biomarker disease BEFREE Pernicious anemia (PA) is an autoimmune disease of multifactorial etiologies characterized by autoimmune chronic atrophic gastritis, cobalamin deficiency (CD) due to defective absorption of dietary cobalamin from the terminal ileum, and by the presence of intrinsic factor and parietal cell antibodies. 28972879 2017
Entrez Id: 2694
Gene Symbol: CBLIF
CBLIF
0.050 Biomarker disease BEFREE This disease is characterized by the deficiency of vitamin B12 due to the presence of anti-intrinsic factor and anti-parietal cell antibodies which inhibit the absorption of the vitamin B12. 31417815 2019
Entrez Id: 2694
Gene Symbol: CBLIF
CBLIF
0.050 Biomarker disease BEFREE Diagnosis of PA relies on histologically proven atrophic body gastritis, peripheral blood examination showing megaloblastic anemia with hypersegmented neutrophils, cobalamin deficiency and antibodies to intrinsic factor and to gastric parietal cells. 24424200 2014
Entrez Id: 51293
Gene Symbol: CD320
CD320
0.040 Biomarker disease BEFREE Our study suggests that the CD320 knockout mouse develops behavioral deficits associated with cobalamin deficiency and therefore could provide a model to understand the metabolic and genetic basis of neuro-pathologic changes due to cobalamin deficiency. 28545069 2017
Entrez Id: 51293
Gene Symbol: CD320
CD320
0.040 Biomarker disease BEFREE Although not significant when corrected for multiple testing, eight single nucleotide polymorphisms (SNPs) in two genes, transcobalamin II (TCN2) and the transcobalamin II-receptor (TCblR), were found to influence several clinical traits of cobalamin deficiency. 25657319 2015
Entrez Id: 51293
Gene Symbol: CD320
CD320
0.040 Biomarker disease BEFREE Our Cd320 KO mouse model is an ideal model system for studying vitamin B12 deficiency. 30124850 2018
Entrez Id: 51293
Gene Symbol: CD320
CD320
0.040 Biomarker disease BEFREE The transcobalamin receptor knockout mouse: a model for vitamin B12 deficiency in the central nervous system. 23430977 2013
Entrez Id: 959
Gene Symbol: CD40LG
CD40LG
0.200 Therapeutic disease RGD Increased levels of the CD40:CD40 ligand dyad in the cerebrospinal fluid of rats with vitamin B12(cobalamin)-deficient central neuropathy. 16716410 2006
Entrez Id: 1072
Gene Symbol: CFL1
CFL1
0.200 Biomarker disease RGD Maternal micronutrient deficiency leads to alteration in the kidney proteome in rat pups. 25982389 2015
Entrez Id: 8029
Gene Symbol: CUBN
CUBN
0.110 GeneticVariation disease BEFREE Cubulin mutations cause a hereditary form of megaloblastic anemia secondary to vitamin B(12) deficiency, and proteinuria occurs in 50% of cases since cubilin is coreceptor for both the intestinal vitamin B(12)-intrinsic factor complex and the tubular reabsorption of protein in the proximal tubule. 21903995 2011
Entrez Id: 8029
Gene Symbol: CUBN
CUBN
0.110 Biomarker disease HPO
Entrez Id: 2524
Gene Symbol: FUT2
FUT2
0.010 GeneticVariation disease BEFREE Although a causing viral infectious agent remains untraceable in Crohn's disease, most recent genome-wide association studies have linked the FUT2 W143X mutation (resulting in asymptomatic norovirus infection) with the pathogenesis of Crohn's ileitis and with vitamin B12 deficiency (i.e., a known risk factor for Crohn's disease with ileal involvement). 24351661 2014
Entrez Id: 57817
Gene Symbol: HAMP
HAMP
0.010 AlteredExpression disease BEFREE In contrast, the plasma hepcidin levels were significantly lower in the iron deficiency group (p < 0.01) when compared to the control group; however, no significant differences were observed in the vitamin B12 deficiency group. 28691407 2017
Entrez Id: 3054
Gene Symbol: HCFC1
HCFC1
0.010 AlteredExpression disease BEFREE The other two variants displayed negative effects on the expression of the HCFC1 target gene MMACHC, which is responsible for the metabolism of cobalamin, suggesting that these individuals may also be susceptible to cobalamin deficiency. 25740848 2015
Entrez Id: 83892
Gene Symbol: KCTD10
KCTD10
0.010 GeneticVariation disease BEFREE Several genome-wide association studies have discovered novel loci at chromosome 12q24, which includes mevalonate kinase (MVK), methylmalonic aciduria (cobalamin deficiency) cbIB type (MMAB), and potassium channel tetramerization domain-containing 10 (KCTD10), all of which influence HDL-cholesterol concentrations. 27716295 2016
Entrez Id: 4036
Gene Symbol: LRP2
LRP2
0.010 Biomarker disease BEFREE Using L2 yolk sac cells, megalin localized to the submembrane compartment by methylmalonic acid (MMA), which accumulates during vitamin B12 deficiency. 26248135 2015
Entrez Id: 25974
Gene Symbol: MMACHC
MMACHC
0.020 Biomarker disease BEFREE The MMACHC proteome: hallmarks of functional cobalamin deficiency in humans. 21497120 2011
Entrez Id: 25974
Gene Symbol: MMACHC
MMACHC
0.020 GeneticVariation disease BEFREE The other two variants displayed negative effects on the expression of the HCFC1 target gene MMACHC, which is responsible for the metabolism of cobalamin, suggesting that these individuals may also be susceptible to cobalamin deficiency. 25740848 2015