Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 57154
Gene Symbol: SMURF1
SMURF1
0.010 AlteredExpression group BEFREE As a result, we observed higher level of XIST and Smurf1, but lower level of miR-27a in SCI rats and lipopolysaccharide (LPS)-induced primary microglial cells. in vitro, LPS induced SCI microglia cells as described by decreased cell viability and B cell lymphoma 2 (Bcl-2) expression, and increased cell apoptosis rate, Bax and cleaved caspase 3 levels, and tumor necrosis factor α (TNF-α) and interleukin 6 (IL-6) secretions. in vivo, a T10 laminectomy caused SCI rats as evidenced by decreased Basso-Beattie-Bresnahan Locomotor Rating Scale (BBB) score and induced expression of Bax, cleaved caspase 3, TNF-α and IL-6. 31778769 2020
Entrez Id: 9500
Gene Symbol: MAGED1
MAGED1
0.010 Biomarker group BEFREE In this study, we detected IERs of ten genes (NBPF8, SOBP, AUTS2, RAB21, SPATA13, ABCC4, WDR7, PHLPP1, NFATC1 and MAGED1) in non-Hodgkin B cell lymphoma (B-NHL) cell line KPUM-UH1 using a high-resolution single nucleotide polymorphism array and reverse transcription polymerase chain reaction using reversely directed divergent primers within exons involved in genomic intragenic gains followed by sequencing analysis. 31686349 2020
Entrez Id: 3190
Gene Symbol: HNRNPK
HNRNPK
0.010 Biomarker group BEFREE Uncovering the role of hnRNP K, an RNA-binding protein, in B-cell lymphomas. 31077320 2020
Entrez Id: 4135
Gene Symbol: MAP6
MAP6
0.010 GeneticVariation group BEFREE This single-center, retrospective, observational study (STOP FN in NHL 2) enrolled patients with B-NHL who underwent a regimen comprising rituximab and CHOP therapy over a 2-year period (January 2015-June 2017). 31093770 2020
Entrez Id: 26053
Gene Symbol: AUTS2
AUTS2
0.010 Biomarker group BEFREE Recurrent intragenic exon rearrangements of SOBP and AUTS2 in non-Hodgkin B-cell lymphoma. 31686349 2020
Entrez Id: 55084
Gene Symbol: SOBP
SOBP
0.010 GeneticVariation group BEFREE Recurrent intragenic exon rearrangements of SOBP and AUTS2 in non-Hodgkin B-cell lymphoma. 31686349 2020
Entrez Id: 55553
Gene Symbol: SOX6
SOX6
0.010 Biomarker group BEFREE Downstream molecular mechanisms, including SRY-box transcription factor 6 (SOX6), extracellular regulated protein kinases (ERK), Cyclin D1, B-cell lymphoma-2 (BCL-2) and BCL2 associated X, apoptosis regulator (BAX), were determined by western blot. 31609809 2020
Entrez Id: 9545
Gene Symbol: RAB3D
RAB3D
0.010 Biomarker group BEFREE Results from this study support evaluation of B-cell lymphoma-2 inhibitors as potential therapies for the treatment of systemic lupus erythematosus.CLINICALTRIALS.GOV: NCT01686555. 31541431 2020
Entrez Id: 4751
Gene Symbol: NEK2
NEK2
0.010 Biomarker group BEFREE Proteome-wide quantification demonstrated selective repression of multiple critical oncoproteins in addition to MYC in B-cell lymphoma including NEK2, MCL1, AURKA, PLK1, and several transcription factors that are generally considered undruggable. 31171817 2020
Entrez Id: 57477
Gene Symbol: SHROOM4
SHROOM4
0.010 Biomarker group BEFREE The levels of Shrm4, GABA<sub>B1</sub>, Bcl-2-associated protein x (Bax), B cell lymphoma 2 (Bcl-2), cleaved Caspase-3, microtubule-associated protein 2 (MAP-2) as well as suppressor of cytokine signaling 2 (SOCS2) were detected to further assess the role of Shrm4 and GABA pathway in NSCs. 31654185 2020
Entrez Id: 26031
Gene Symbol: OSBPL3
OSBPL3
0.010 Biomarker group BEFREE Furthermore, the knockout of Orp3 results in an aberrant expansion of lymphoid progenitor cells and a high penetrance formation of chromosomal instable, pauci-clonal B-cell lymphoma in aging mice. 31659255 2020
Entrez Id: 4772
Gene Symbol: NFATC1
NFATC1
0.010 Biomarker group BEFREE In this study, we detected IERs of ten genes (NBPF8, SOBP, AUTS2, RAB21, SPATA13, ABCC4, WDR7, PHLPP1, NFATC1 and MAGED1) in non-Hodgkin B cell lymphoma (B-NHL) cell line KPUM-UH1 using a high-resolution single nucleotide polymorphism array and reverse transcription polymerase chain reaction using reversely directed divergent primers within exons involved in genomic intragenic gains followed by sequencing analysis. 31686349 2020
Entrez Id: 6714
Gene Symbol: SRC
SRC
0.010 GeneticVariation group BEFREE Reverse transcription quantitative polymerase chain reaction assay and Western blot analysis were carried out for the assessment of NgBR, factors correlated to ICAM-1, including steroid receptor coactivator (SRC) and proline-rich tyrosine kinase2 (PYK2), and factors associated with apoptosis, including B-cell lymphoma-2 (Bcl-2), Bcl-2 associated protein X (Bax), caspase 3 and cleaved-caspase 3. 31442237 2019
Entrez Id: 4899
Gene Symbol: NRF1
NRF1
0.010 AlteredExpression group BEFREE Furthermore, overexpression of NRF‑1 increased the expression of B‑cell lymphoma‑2, hypoxia inducible factor‑1α and NRF‑2. 30628711 2019
Entrez Id: 6134
Gene Symbol: RPL10
RPL10
0.010 GeneticVariation group BEFREE RPL10 R98S mutant leukemia cells can survive high oxidative stress levels via a specific increase of IRES-mediated translation of the anti-apoptotic factor B-cell lymphoma 2 (BCL-2), mediating BCL-2 protein overexpression. 29930300 2019
Entrez Id: 3240
Gene Symbol: HP
HP
0.010 Biomarker group BEFREE The expression levels of 7 proteins [Immunoglobulin heavy constant µ; proto-oncogene diffuse B-cell lymphoma (DBL2); 26S protease regulatory subunit 4 (P26s4); serum albumin; haptoglobin; and two unknown proteins with isoelectronic point (pI) of 6.41 and molecular weight of 35.4 kDa, and pI of 8.05 and molecular weight of 27.4 kDa, respectively] were downregulated in MM compared with healthy controls. 30651846 2019
Entrez Id: 2641
Gene Symbol: GCG
GCG
0.010 AlteredExpression group BEFREE CUMS reduced GLP-1 protein levels and phosphorylation levels of extracellular signal-regulated kinase 1/2 (ERK1/2), but increased protein levels of B-cell lymphoma 2-associated X-protein (BAX) in mice hippocampus. 30599373 2019
Entrez Id: 2263
Gene Symbol: FGFR2
FGFR2
0.010 AlteredExpression group BEFREE The silencing of FGFR2 was demonstrated to augment the effects of cisplatin treatment, including decreasing the cell viability and inducing cell cycle arrest, which involved the increase and decrease of the durations of G1 and S phases, respectively, and a decrease in the expression levels of cyclin D1 and CDC25A, and increasing the rate of apoptosis via the intrinsic apoptosis pathway, as demonstrated by the upregulation of cleaved caspase‑3 and B‑cell lymphoma 2 (Bcl‑2)‑associated X protein and downregulation of Bcl‑2, in SUNE1 and C666‑1 cell lines. 31115494 2019
Entrez Id: 4087
Gene Symbol: SMAD2
SMAD2
0.010 AlteredExpression group BEFREE The expression of miR-153 in patients with NPC was markedly decreased compared with that in paracarcinoma tissue. miR-153 upregulation observably decreased cell viability, induced apoptosis, increased caspase-3 and -9 activity, and increased the B-cell lymphoma 2 (Bcl-2)-associated X protein/Bcl-2 protein expression ratio in 13-9B cells. miR-153 upregulation also suppressed transforming growth factor-β<sub>2</sub> (TGF-β<sub>2</sub>) and Smad2 protein expression in 13-9B cells. 30655812 2019
Entrez Id: 7415
Gene Symbol: VCP
VCP
0.010 AlteredExpression group BEFREE VCP expression in 66 samples of orbital B-cell lymphoma was determined by immunohistochemistry using monoclonal VCP antibodies. 30643422 2019
Entrez Id: 5091
Gene Symbol: PC
PC
0.010 PosttranslationalModification group BEFREE To characterize the impact of PCB exposure on DNA methylation in peripheral blood leucocytes and to evaluate the corresponding changes in relation to possible health effects, with a focus on B-cell lymphoma. 30776747 2019
Entrez Id: 657
Gene Symbol: BMPR1A
BMPR1A
0.010 AlteredExpression group BEFREE Compared with those in the model group, the necrosis of bone tissues significantly decreased, the apoptosis level of osteocytes remarkably declined (p<0.01), the content of IL-1β, IL-6 and TNF-α in bone tissues markedly decreased (p<0.01), the content of IL-10 increased (p<0.01), the expression level of cleaved caspase-3 protein in bone tissues significantly declined (p<0.01), the B-cell lymphoma 2/BCL2-Associated X (Bcl-2/Bax) expression level markedly increased (p<0.01) and the expression levels of ALK3, GATA4 and NKX2.5 in bone tissues significantly decreased (p<0.01) in the intervention group. 31210286 2019
Entrez Id: 3973
Gene Symbol: LHCGR
LHCGR
0.010 AlteredExpression group BEFREE The bat treated in vivo with putrescine during delayed development showed increase in progesterone and estradiol synthesis, correlated with increased expression of luteinizing hormone receptor, steroidogenic acute receptor protein, and 3β-hydroxysteroid dehydrogenase through extracellular signal-regulated kinase (ERK1/2)-mediated pathway in the ovary; but showed increase in the weight and expression of progesterone receptor (PR), B-cell lymphoma 2, proliferating cell nucleus antigen, and vascular endothelial growth factor proteins in utero-embryonic unit. 31579974 2019
Entrez Id: 100126343
Gene Symbol: MIR874
MIR874
0.010 Biomarker group BEFREE Then, miR-874 inhibition improved cardiac function of I/R mice, inhibited cardiomyocyte apoptosis (also shown as decreased Bcl-2 associated X protein B [Bax] and increased B-cell lymphoma-2 [Bcl-2]), and activated the JAK2/STAT3 signaling pathway. 30370578 2019
Entrez Id: 55367
Gene Symbol: PIDD1
PIDD1
0.010 Biomarker group BEFREE The vast majority of lymphomas reported in the context of PIDDs are B cell lymphomas, though T cell lymphomas have been reported in a few studies, and tend to largely be associated with chromosomal breakage disorders (4) or Cartilage Hair Hypoplasia (5). 31057537 2019