Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 5083
Gene Symbol: PAX9
PAX9
0.030 Biomarker disease BEFREE MSX1 and PAX9 have been associated with tooth agenesis in mice and humans, but interestingly for humans, these genes are associated with specific missing teeth. 12598542 2003
Entrez Id: 3242
Gene Symbol: HPD
HPD
0.020 GeneticVariation disease BEFREE Splinted teeth did not show significantly increased risk of tooth loss compared with non-splinted teeth (HR; 95% CI: 1.30; 0.87-1.93); while age (1.07; 1.05-1.09), PPD >6 mm (4.24; 1.26-14.31), bone loss (mean HR was 5.07-15.36 depending on severity), tooth location (posterior versus anterior teeth: HR 2.08; 1.24-3.49) and the number of occlusal contact areas (mean HR was 4.38-17.34 depending on the number of antagonistic contact areas) were associated with tooth loss. 30389428 2019
Entrez Id: 8838
Gene Symbol: CCN6
CCN6
0.020 GeneticVariation disease BEFREE Splinted teeth did not show significantly increased risk of tooth loss compared with non-splinted teeth (HR; 95% CI: 1.30; 0.87-1.93); while age (1.07; 1.05-1.09), PPD >6 mm (4.24; 1.26-14.31), bone loss (mean HR was 5.07-15.36 depending on severity), tooth location (posterior versus anterior teeth: HR 2.08; 1.24-3.49) and the number of occlusal contact areas (mean HR was 4.38-17.34 depending on the number of antagonistic contact areas) were associated with tooth loss. 30389428 2019
Entrez Id: 5345
Gene Symbol: SERPINF2
SERPINF2
0.020 Biomarker disease BEFREE We investigated 30 traits including "global" [e.g., number of natural teeth (NT) and incident tooth loss], clinically defined (e.g., dental caries via the DMFS index, periodontitis via the CDC/AAP and WW17 classifications), and biologically informed (e.g., subgingival pathogen colonization and "complex" traits). 31732942 2019
Entrez Id: 30813
Gene Symbol: VSX1
VSX1
0.020 GeneticVariation disease BEFREE Splinted teeth did not show significantly increased risk of tooth loss compared with non-splinted teeth (HR; 95% CI: 1.30; 0.87-1.93); while age (1.07; 1.05-1.09), PPD >6 mm (4.24; 1.26-14.31), bone loss (mean HR was 5.07-15.36 depending on severity), tooth location (posterior versus anterior teeth: HR 2.08; 1.24-3.49) and the number of occlusal contact areas (mean HR was 4.38-17.34 depending on the number of antagonistic contact areas) were associated with tooth loss. 30389428 2019
Entrez Id: 27161
Gene Symbol: AGO2
AGO2
0.020 GeneticVariation disease BEFREE Splinted teeth did not show significantly increased risk of tooth loss compared with non-splinted teeth (HR; 95% CI: 1.30; 0.87-1.93); while age (1.07; 1.05-1.09), PPD >6 mm (4.24; 1.26-14.31), bone loss (mean HR was 5.07-15.36 depending on severity), tooth location (posterior versus anterior teeth: HR 2.08; 1.24-3.49) and the number of occlusal contact areas (mean HR was 4.38-17.34 depending on the number of antagonistic contact areas) were associated with tooth loss. 30389428 2019
Entrez Id: 5345
Gene Symbol: SERPINF2
SERPINF2
0.020 Biomarker disease BEFREE The predictive value of oral health ratings for tooth loss was comparable to that of the CDC/AAP case definition or caries and periodontitis diagnostics. 30099763 2018
Entrez Id: 3569
Gene Symbol: IL6
IL6
0.020 Biomarker disease BEFREE After multivariable adjustment, the relative biomarker increase between the highest and the lowest tooth loss level was: high-sensitivity C-reactive protein 1.21 (95% confidence interval, 1.14-1.29), interleukin 6 1.14 (1.10-1.18), lipoprotein-associated phospholipase A<sub>2</sub> activity 1.05 (1.03-1.06), growth differentiation factor 15 1.11 (1.08-1.14), and N-terminal pro-B-type natriuretic peptide (NT-proBNP) 1.18 (1.11-1.25). 28735759 2017
Entrez Id: 27161
Gene Symbol: AGO2
AGO2
0.020 GeneticVariation disease BEFREE Risk of tooth loss was significantly increased in active smokers (HR[95% CI]: 4.94[1.91/12.75]), the upper dental arch (1.94[1,16/3.25]), with each mm of residual PPD (1.41[1.29/1.53]), teeth with furcation involvement (FI) (HR 4.00-4.44 for different degrees) and mobility (5.39 [2.06/14.1] for degree III). 28346706 2017
Entrez Id: 30813
Gene Symbol: VSX1
VSX1
0.020 GeneticVariation disease BEFREE Risk of tooth loss was significantly increased in active smokers (HR[95% CI]: 4.94[1.91/12.75]), the upper dental arch (1.94[1,16/3.25]), with each mm of residual PPD (1.41[1.29/1.53]), teeth with furcation involvement (FI) (HR 4.00-4.44 for different degrees) and mobility (5.39 [2.06/14.1] for degree III). 28346706 2017
Entrez Id: 3242
Gene Symbol: HPD
HPD
0.020 GeneticVariation disease BEFREE Risk of tooth loss was significantly increased in active smokers (HR[95% CI]: 4.94[1.91/12.75]), the upper dental arch (1.94[1,16/3.25]), with each mm of residual PPD (1.41[1.29/1.53]), teeth with furcation involvement (FI) (HR 4.00-4.44 for different degrees) and mobility (5.39 [2.06/14.1] for degree III). 28346706 2017
Entrez Id: 8838
Gene Symbol: CCN6
CCN6
0.020 GeneticVariation disease BEFREE Risk of tooth loss was significantly increased in active smokers (HR[95% CI]: 4.94[1.91/12.75]), the upper dental arch (1.94[1,16/3.25]), with each mm of residual PPD (1.41[1.29/1.53]), teeth with furcation involvement (FI) (HR 4.00-4.44 for different degrees) and mobility (5.39 [2.06/14.1] for degree III). 28346706 2017
Entrez Id: 4487
Gene Symbol: MSX1
MSX1
0.020 GeneticVariation disease BEFREE Effects of PAX9 and MSX1 gene variants to hypodontia, tooth size and the type of congenitally missing teeth. 28040065 2016
Entrez Id: 3569
Gene Symbol: IL6
IL6
0.020 GeneticVariation disease BEFREE Effects of IL6 C-634G polymorphism on tooth loss and their interaction with smoking habits. 26011111 2015
Entrez Id: 10913
Gene Symbol: EDAR
EDAR
0.020 GeneticVariation disease BEFREE Individuals with a c.1072C > T mutation in the EDAR-gene displayed a typical pattern of congenitally missing teeth in the frontal area with functional consequences. 24884697 2014
Entrez Id: 10913
Gene Symbol: EDAR
EDAR
0.020 Biomarker disease BEFREE Significant differences in the number of some primary missing teeth (incisor and canine) related to EDA-EDAR genes defects were detected for the first time between XLHED and autosomal recessive HED, suggesting differential local effects of EDA-EDAR genes during odontogenesis. 20236127 2010
Entrez Id: 7421
Gene Symbol: VDR
VDR
0.020 GeneticVariation disease BEFREE The ApaI polymorphism of the VDR gene is associated with oral bone loss, clinical attachment loss, and tooth loss in older men. 12666703 2003
Entrez Id: 7421
Gene Symbol: VDR
VDR
0.020 GeneticVariation disease BEFREE Association of estrogen and vitamin D receptor gene polymorphisms with tooth loss and oral bone loss in Japanese postmenopausal women. 12792298 2003
Entrez Id: 4487
Gene Symbol: MSX1
MSX1
0.020 Biomarker disease BEFREE MSX1 and PAX9 have been associated with tooth agenesis in mice and humans, but interestingly for humans, these genes are associated with specific missing teeth. 12598542 2003
Entrez Id: 213
Gene Symbol: ALB
ALB
0.010 Biomarker disease BEFREE Multivariate analysis that included age demonstrated that tooth loss is an independent prognostic factor (hazard ratio 1.87, 95% confidence interval 1.22-2.87), in addition to clinical T stage and preoperative serum albumin. 31605330 2020
Entrez Id: 91544
Gene Symbol: UBXN11
UBXN11
0.010 Biomarker disease BEFREE Number of decayed (NDT) and missing teeth (NMT); history of dental trauma; caregiver's RSC and SOC, socio-economic factors, and OHRQoL were evaluated. 31710730 2020
Entrez Id: 10153
Gene Symbol: CEBPZ
CEBPZ
0.010 Biomarker disease BEFREE These findings suggest that the loss of teeth causes spatial cognitive impairment in rats and that the underlying mechanism might be associated with a decrease in CBF and an increase in the glutamate level in the hippocampus. 31079020 2019
Entrez Id: 6425
Gene Symbol: SFRP5
SFRP5
0.010 AlteredExpression disease BEFREE No significant differences in sFRP5 serum levels were found among patients with periodontitis without tooth loss (6.0 [2.5-15.8] ng/ml, median [IQR]) and controls (3.1 [0.0-10.6] ng/ml, median [IQR], p = 0.06). 30762911 2019
Entrez Id: 567
Gene Symbol: B2M
B2M
0.010 AlteredExpression disease BEFREE The anti-Ro/SSA-negative group showed less rheumatoid factor positivity (p<0.001), leucopenia (p=0.003), hyper-gammaglobulinaemia (p<0.001), lower serum β2-microglobulin level (p=0.034), more anti-centromere antibody positivity (p<0.001), higher score in dryness domain of EULAR SS patient-reported index (p=0.048) and more positivity for peripheral nervous system domain in EULAR SS disease activity index and loss of teeth in SS disease damage index (p=0.021 and 0.041, respectively) than patients who were positive for anti-Ro/ SSA antibody. 31376264 2019
Entrez Id: 8313
Gene Symbol: AXIN2
AXIN2
0.010 GeneticVariation disease BEFREE In this case report we describe a family with c.1972delA, p.Ser658Alafs*31 nonsense variant in AXIN2 where the three confirmed carriers presented with both oligodontia and colorectal adenomatous polyposis; mean number of teeth missing in carriers was 16.5 (range 11-22) and mean number of polyps in carriers was 49 (range 5->100, polyps were predominantly adenomatous). 30671715 2019