Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 9623
Gene Symbol: TCL1B
TCL1B
0.010 Biomarker group BEFREE RNA sequencing analysis of this MBEN cohort disclosed two clear transcriptome clusters (TCL) of these CNS tumors: "TCL1 MBEN" and "TCL2 MBEN" which were associated with various gene expression signatures, mutational landscapes and, importantly, prognosis. 31781912 2020
Entrez Id: 100133941
Gene Symbol: CD24
CD24
0.010 AlteredExpression group BEFREE Interestingly, high expression of CD24 and PRAME were prevalently found in high-grade tumors of the central nervous system. 31567202 2020
Entrez Id: 23532
Gene Symbol: PRAME
PRAME
0.010 AlteredExpression group BEFREE Interestingly, high expression of CD24 and PRAME were prevalently found in high-grade tumors of the central nervous system. 31567202 2020
Entrez Id: 8115
Gene Symbol: TCL1A
TCL1A
0.010 Biomarker group BEFREE RNA sequencing analysis of this MBEN cohort disclosed two clear transcriptome clusters (TCL) of these CNS tumors: "TCL1 MBEN" and "TCL2 MBEN" which were associated with various gene expression signatures, mutational landscapes and, importantly, prognosis. 31781912 2020
Entrez Id: 442912
Gene Symbol: MIR367
MIR367
0.010 Biomarker group BEFREE Our findings reveal possible clinical applications of a cancer stemness pathway, highlighting miR-367 as a putative liquid biopsy biomarker that could be further explored to improve early diagnosis and prognosis prediction, and potentially serve as a therapeutic target in aggressive embryonal CNS tumors. 31402560 2019
Entrez Id: 90780
Gene Symbol: PYGO2
PYGO2
0.010 AlteredExpression group BEFREE In this study, we identified Pygo2 expression features by immunohistochemistry in 73 central nervous system tumor specimens, in comparison with 14 normal brain tissues and surrounding non-tumorous tissues of tumor. 29978348 2019
Entrez Id: 8408
Gene Symbol: ULK1
ULK1
0.010 Biomarker group BEFREE Inhibition of ULK1 and VPS34 are potentially viable clinical targets in autophagy-dependent CNS tumors. 31515514 2019
Entrez Id: 6390
Gene Symbol: SDHB
SDHB
0.010 Biomarker group BEFREE In the present study, we investigated the loss of SDHB immunoexpression in 90 cases of CNS tumors. 30971719 2019
Entrez Id: 5289
Gene Symbol: PIK3C3
PIK3C3
0.010 Biomarker group BEFREE Inhibition of ULK1 and VPS34 are potentially viable clinical targets in autophagy-dependent CNS tumors. 31515514 2019
Entrez Id: 100128998
Gene Symbol: C20orf181
C20orf181
0.010 Biomarker group BEFREE Multivariate logistic regression analysis showed that administration of tPA for CVC dysfunction was 2.5 times more likely in patients with non-CNS tumors than those with CNS tumors (P=0.012; 95% confidence interval, 1.3-4.9). 31725547 2019
Entrez Id: 113451
Gene Symbol: AZIN2
AZIN2
0.010 Biomarker group BEFREE To investigate the validity of various approaches to extract quantitative measurements of diffusion imaging (i.e., apparent diffusion coefficient [ADC]) to investigate tumors of the central nervous system. 30738940 2019
Entrez Id: 5156
Gene Symbol: PDGFRA
PDGFRA
0.010 GeneticVariation group BEFREE Our study further supports "myxoid glioneuronal tumor, PDGFRA p.K385-mutant" as a distinct CNS tumor entity and expands the spectrum of clinicopathologic and radiologic features of this neoplasm. 31609499 2019
Entrez Id: 339896
Gene Symbol: GADL1
GADL1
0.010 Biomarker group BEFREE To investigate the validity of various approaches to extract quantitative measurements of diffusion imaging (i.e., apparent diffusion coefficient [ADC]) to investigate tumors of the central nervous system. 30738940 2019
Entrez Id: 10551
Gene Symbol: AGR2
AGR2
0.010 GeneticVariation group BEFREE Moreover, novel associated pathways and clinically relevant deregulated genes in AGR2 high CNS tumors are identified using a meta-analysis approach. 31247903 2019
Entrez Id: 1019
Gene Symbol: CDK4
CDK4
0.010 Biomarker group BEFREE Ribociclib, an orally bioavailable small-molecule CDK4/6 inhibitor is currently undergoing evaluation to treat pediatric central nervous system (CNS) tumors. 31079218 2019
Entrez Id: 6535
Gene Symbol: SLC6A8
SLC6A8
0.010 GeneticVariation group BEFREE Six hundred sixty-five survivors of CNS tumors (53.8% male and 51.7% treated with cranial radiation therapy [CRT]), who had a current median age of 15.0 years (range, 2.0-17.0 years) and were a median of 12.1 years (range, 8.0-17.7 years) from their diagnosis, were compared with 1376 survivors of solid tumors (50.4% male), who had a median age of 15.0 years (range, 12.0-17.0 years) and were a median of 13.2 years (range, 8.3-17.9 years) from their diagnosis, and 726 siblings (52.2% male), who had a median age of 15.0 years (range, 12.0-17.0 years). 30067866 2018
Entrez Id: 4493
Gene Symbol: MT1E
MT1E
0.010 Biomarker group BEFREE We performed a phase 1 trial to determine the dose-limiting toxicities (DLTs), maximum tolerated or recommended phase 2 dose (MTD/RP2D), and pharmacokinetics (PK) of eribulin in children with refractory or recurrent solid (excluding central nervous system) tumors. 29719113 2018
Entrez Id: 3576
Gene Symbol: CXCL8
CXCL8
0.010 Biomarker group BEFREE CSF IL-8 concentrations were significantly elevated in CNS tumor patients as compared to non-tumoral individuals (P = 0.000); serum CCL2 and sICAM-1 concentrations were significantly decreased in CNS tumors in comparison with the comparative group (P = 0.002 and P = 0.026, respectively). 29086194 2018
Entrez Id: 57120
Gene Symbol: GOPC
GOPC
0.010 Biomarker group BEFREE GOPC-ROS1 is a recurrent ROS1 fusion in primary central nervous system (CNS) tumors. 30171048 2018
Entrez Id: 799
Gene Symbol: CALCR
CALCR
0.010 GeneticVariation group BEFREE Six hundred sixty-five survivors of CNS tumors (53.8% male and 51.7% treated with cranial radiation therapy [CRT]), who had a current median age of 15.0 years (range, 2.0-17.0 years) and were a median of 12.1 years (range, 8.0-17.7 years) from their diagnosis, were compared with 1376 survivors of solid tumors (50.4% male), who had a median age of 15.0 years (range, 12.0-17.0 years) and were a median of 13.2 years (range, 8.3-17.9 years) from their diagnosis, and 726 siblings (52.2% male), who had a median age of 15.0 years (range, 12.0-17.0 years). 30067866 2018
Entrez Id: 6347
Gene Symbol: CCL2
CCL2
0.010 AlteredExpression group BEFREE CSF IL-8 concentrations were significantly elevated in CNS tumor patients as compared to non-tumoral individuals (P = 0.000); serum CCL2 and sICAM-1 concentrations were significantly decreased in CNS tumors in comparison with the comparative group (P = 0.002 and P = 0.026, respectively). 29086194 2018
Entrez Id: 811
Gene Symbol: CALR
CALR
0.010 GeneticVariation group BEFREE Six hundred sixty-five survivors of CNS tumors (53.8% male and 51.7% treated with cranial radiation therapy [CRT]), who had a current median age of 15.0 years (range, 2.0-17.0 years) and were a median of 12.1 years (range, 8.0-17.7 years) from their diagnosis, were compared with 1376 survivors of solid tumors (50.4% male), who had a median age of 15.0 years (range, 12.0-17.0 years) and were a median of 13.2 years (range, 8.3-17.9 years) from their diagnosis, and 726 siblings (52.2% male), who had a median age of 15.0 years (range, 12.0-17.0 years). 30067866 2018
Entrez Id: 7299
Gene Symbol: TYR
TYR
0.010 Biomarker group BEFREE Unsupervised hierarchical clustering analysis of DNA methylation in 27 tumors and comparison with a reference group of 150 ATRTs classified the CNS tumors (n = 14) as sonic hedgehog (64%), tyrosinase (21%), and MYC (14%). 29428974 2018
Entrez Id: 6098
Gene Symbol: ROS1
ROS1
0.010 Biomarker group BEFREE GOPC-ROS1 is a recurrent ROS1 fusion in primary central nervous system (CNS) tumors. 30171048 2018
Entrez Id: 7167
Gene Symbol: TPI1
TPI1
0.010 Biomarker group BEFREE These results provide compelling rationale for clinical testing of alisertib and/or other AURKA inhibitors for potential combination use with TPI 287 against glioblastoma and other CNS neoplasms. 29396807 2018