Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 94233
Gene Symbol: OPN4
OPN4
0.370 Biomarker disease BEFREE <b>Conclusions:</b> This report provides initial evidence of normal melanopsin function and environmental light exposures in patients with pre-dominately mid and moderate non-seasonal depression in a subtropical location in the southern hemisphere. 30271376 2018
Entrez Id: 9575
Gene Symbol: CLOCK
CLOCK
0.310 Biomarker disease PSYGENET (1) A subgroup of depressed patients have documented circadian abnormalities in mood, sleep, temperature and neuroendocrine secretion; (2) It is also suggested that seasonal affective disorder (SAD) patients may show an abnormality in their ability to shift their daily circadian rhythms in response to seasonal light changes; (3) The dramatic improvements in some depressions in response to three treatment modalities which manipulate circadian rhythms suggest that circadian abnormalities reported in patients may constitute a core component of the pathophysiology in depression; (4) Mutations in clock genes have been discovered that accelerate or delay circadian cycles; (5) It is hypothesized that 24-hour rhythm abnormalities in major depression and SAD may be due to altered clock genes. 10700653 2000
Entrez Id: 9575
Gene Symbol: CLOCK
CLOCK
0.310 Biomarker disease BEFREE (1) A subgroup of depressed patients have documented circadian abnormalities in mood, sleep, temperature and neuroendocrine secretion; (2) It is also suggested that seasonal affective disorder (SAD) patients may show an abnormality in their ability to shift their daily circadian rhythms in response to seasonal light changes; (3) The dramatic improvements in some depressions in response to three treatment modalities which manipulate circadian rhythms suggest that circadian abnormalities reported in patients may constitute a core component of the pathophysiology in depression; (4) Mutations in clock genes have been discovered that accelerate or delay circadian cycles; (5) It is hypothesized that 24-hour rhythm abnormalities in major depression and SAD may be due to altered clock genes. 10700653 2000
Entrez Id: 6532
Gene Symbol: SLC6A4
SLC6A4
0.400 Biomarker disease BEFREE 5-HTTLPR is also associated with seasonality in SAD patients and in the general population. 11244145 2001
Entrez Id: 6532
Gene Symbol: SLC6A4
SLC6A4
0.400 Biomarker disease PSYGENET 5-HTT turnover rate, a measure for the number of inward transport events per minute, and tyramine-induced, 5-HTT-mediated outward transport were assessed at baseline, after 4 weeks of bright light therapy, and in summer using a case-control design in a consecutive sample of 73 drug-free depressed patients with SAD and 70 nonseasonal healthy controls. 17882235 2008
Entrez Id: 6532
Gene Symbol: SLC6A4
SLC6A4
0.400 GeneticVariation disease BEFREE SLC6A4 provided strong and consistent evidence of association with the PD and PD+SAD groups, with the most significant association in both groups being at rs140701 (chi(2)=10.72, P=0.001 with PD and chi(2)=8.59, P=0.003 in the PD+SAD group). 18663369 2010
Entrez Id: 26137
Gene Symbol: ZBTB20
ZBTB20
0.010 Biomarker disease BEFREE ZBTB20 is a candidate susceptibility gene for SAD, based on a convergence of genetic, genomic, and biological evidence. 30217971 2018
Entrez Id: 3358
Gene Symbol: HTR2C
HTR2C
0.310 GeneticVariation disease BEFREE A Cys 23-Ser 23 substitution in the 5-HT(2C) receptor gene influences body weight regulation in females with seasonal affective disorder: an Austrian-Canadian collaborative study. 16157158 2005
Entrez Id: 3358
Gene Symbol: HTR2C
HTR2C
0.310 Biomarker disease PSYGENET A Cys 23-Ser 23 substitution in the 5-HT(2C) receptor gene influences body weight regulation in females with seasonal affective disorder: an Austrian-Canadian collaborative study. 16157158 2005
Entrez Id: 9531
Gene Symbol: BAG3
BAG3
0.020 AlteredExpression disease BEFREE A multiple regression analysis was performed to examine whether cost/probability biases, BIS/BAS, and their interactions affected SAD symptoms; following this, the main effects of cost bias and BIS were determined for LSAS-Fear (β = 0.64, <i>p</i> < 0.001; β = 0.33, <i>p</i> < 0.01) and LSAS-Avoidance (β = 0.49, <i>p</i> < 0.001; β = 0.35, <i>p</i> < 0.01). 31803098 2019
Entrez Id: 276
Gene Symbol: AMY1A
AMY1A
0.010 Biomarker disease BEFREE After treatment, children with SAD in the waitlist group differed from children with SAD in the CBT group by showing stronger cortisol reactivity and a higher responder rate, indicative of a possible sensitization to stress.No difference was found for sAA. 31386987 2019
Entrez Id: 277
Gene Symbol: AMY1B
AMY1B
0.010 Biomarker disease BEFREE After treatment, children with SAD in the waitlist group differed from children with SAD in the CBT group by showing stronger cortisol reactivity and a higher responder rate, indicative of a possible sensitization to stress.No difference was found for sAA. 31386987 2019
Entrez Id: 278
Gene Symbol: AMY1C
AMY1C
0.010 Biomarker disease BEFREE After treatment, children with SAD in the waitlist group differed from children with SAD in the CBT group by showing stronger cortisol reactivity and a higher responder rate, indicative of a possible sensitization to stress.No difference was found for sAA. 31386987 2019
Entrez Id: 4862
Gene Symbol: NPAS2
NPAS2
0.330 GeneticVariation disease BEFREE Although we cannot confirm previous findings of an association between SAD and the ARNTL and NPAS2 genes, these genes may influence seasonal variations through metabolic factors such as body weight and appetite. 26134245 2015
Entrez Id: 4852
Gene Symbol: NPY
NPY
0.300 Biomarker disease PSYGENET Among some SAD patients, it is possible that the sustained ingestion of high-fat diet will rather activate the transcription of the neuropeptide Y gene than deactivate it, indicating a defect in macronutrient selection. 8898322 1996
Entrez Id: 6532
Gene Symbol: SLC6A4
SLC6A4
0.400 GeneticVariation disease BEFREE An association between the presence of PMDD and family history (P=0.0029) and 5-HTTLPR long/short allele-heterozygosity (P=0.033) was found in females with SAD. 11872329 2002
Entrez Id: 6532
Gene Symbol: SLC6A4
SLC6A4
0.400 GeneticVariation disease BEFREE Association between SAD and the shorter allele of the serotonin transporter promoter repeat length polymorphism (5-HTTLPR) has been reported in an American sample. 11300730 2001
Entrez Id: 4311
Gene Symbol: MME
MME
0.010 Biomarker disease BEFREE Behavioral (reaction time and accuracy) and electrocortical measures (P100, N170, EPN, LPP) were assessed during a facial emotion identification task in children (age 10-13) with SAD (n = 32), clinical controls with mixed anxiety disorders (n = 30), and healthy controls (n = 33). 29452149 2018
Entrez Id: 4862
Gene Symbol: NPAS2
NPAS2
0.330 Biomarker disease PSYGENET Certain allelic combinations of NPAS2, PER3, and BMAL1 appear to contribute to the risk of SAD. 17969870 2007
Entrez Id: 8863
Gene Symbol: PER3
PER3
0.320 GeneticVariation disease BEFREE Certain allelic combinations of NPAS2, PER3, and BMAL1 appear to contribute to the risk of SAD. 17969870 2007
Entrez Id: 8863
Gene Symbol: PER3
PER3
0.320 Biomarker disease PSYGENET Certain allelic combinations of NPAS2, PER3, and BMAL1 appear to contribute to the risk of SAD. 17969870 2007
Entrez Id: 406
Gene Symbol: ARNTL
ARNTL
0.320 Biomarker disease BEFREE Certain allelic combinations of NPAS2, PER3, and BMAL1 appear to contribute to the risk of SAD. 17969870 2007
Entrez Id: 406
Gene Symbol: ARNTL
ARNTL
0.320 Biomarker disease PSYGENET Certain allelic combinations of NPAS2, PER3, and BMAL1 appear to contribute to the risk of SAD. 17969870 2007
Entrez Id: 4862
Gene Symbol: NPAS2
NPAS2
0.330 GeneticVariation disease LHGDN Circadian clock-related polymorphisms in seasonal affective disorder and their relevance to diurnal preference. 12655319 2003
Entrez Id: 2555
Gene Symbol: GABRA2
GABRA2
0.010 GeneticVariation disease BEFREE Collectively, these findings reveal a neurobiological mechanism which may relate to the clinical observation that early trauma increases the risk for substance abuse disorder (SAD) in individuals harbouring haplotypic variations in the Gabra2 gene. 30138693 2018