Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 675
Gene Symbol: BRCA2
BRCA2
0.100 GeneticVariation disease BEFREE The increased risk of ovarian cancer is consistent with germline mutations in the BRCA1 and BRCA2 genes, while the risk of soft tissue and bone sarcomas may reflect the association of these tumours with Li-Fraumeni syndrome. 10962444 2000
Entrez Id: 675
Gene Symbol: BRCA2
BRCA2
0.100 GeneticVariation disease BEFREE Among BRCA1/BRCA2 mutation negative women without a family history suggestive of LFS or a personal history of multiple LFS-related tumours, the TP53 mutation frequency was < 1% (2/233). 30607672 2019
Entrez Id: 675
Gene Symbol: BRCA2
BRCA2
0.100 GeneticVariation disease BEFREE Because seven of our BRCA1 and BRCA2 mutation-negative families fulfilled the criteria of either Li-Fraumeni syndrome (LFS) or Li-Fraumeni-like syndrome (LFL), we decided to screen them for germ-line TP53 mutations in exons 5-8 using a dual-temperature single-strand conformation polymorphism assay (SSCP). 10432928 1999
Entrez Id: 675
Gene Symbol: BRCA2
BRCA2
0.100 GeneticVariation disease BEFREE Most of the genes listed are responsible for various well-defined cancer syndromes, such as CDKN2A (familial atypical mole-multiple melanoma, FAMMM), the mismatch repair genes (Lynch Syndrome), TP53 (Li-Fraumeni syndrome), APC (familial adenomatous polyposis), and BRCA2 (breast-ovarian familial cancer), where PC is part of the cancer spectrum of the disease. 19150414 2009
Entrez Id: 857
Gene Symbol: CAV1
CAV1
0.010 AlteredExpression disease BEFREE Divergent control of Cav-1 expression in non-cancerous Li-Fraumeni syndrome and human cancer cell lines. 23114650 2013
Entrez Id: 960
Gene Symbol: CD44
CD44
0.010 GeneticVariation disease BEFREE Here, we report a change in the expression of a CD44 variant isoform (CD44v8-10) in an 8-year-old female LFS patient with osteosarcoma and atypical liver cancer after chemotherapy. 23031740 2012
Entrez Id: 999
Gene Symbol: CDH1
CDH1
0.010 GeneticVariation disease BEFREE However, there are rare, inherited gastric cancer predisposition traits, such as germline p53 (Li-Fraumeni syndrome) as well as E-cadherin (CDH1) alterations in familial diffuse gastric cancers. 11979414 2002
Entrez Id: 1017
Gene Symbol: CDK2
CDK2
0.010 GeneticVariation disease BEFREE Exclusion of the genes CDKN2 and PTEN as causative gene defects in Li-Fraumeni syndrome. 10389970 1999
Entrez Id: 1026
Gene Symbol: CDKN1A
CDKN1A
0.010 Biomarker disease BEFREE Herein we used single-cell observation methods to gain insight into the roles of p16(INK4A) and p21(WAF1) (hereafter p16 and p21) in replicative senescence and ionizing radiation-induced accelerated senescence in human [normal, ataxia telangiectasia (AT) and Li-Fraumeni syndrome (LFS)] fibroblast strains. 20039273 2010
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.350 GeneticVariation disease ORPHANET To our knowledge, this is the first report of a germline gross deletion of the <i>CDKN2A-CDKN2B</i> locus in an LFS family. 29263814 2016
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.350 GeneticVariation disease BEFREE P16INK4A codon 94 mutation observed in our family is a novel mutation in Li-Fraumeni syndrome. 10484981 1999
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.350 GeneticVariation disease ORPHANET Germline CDKN2A/P16INK4A mutations contribute to genetic determinism of sarcoma. 28592523 2017
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.350 AlteredExpression disease BEFREE In p53-deficient (LFS) fibroblasts, on the other hand, replicative senescence and ionizing radiation-triggered accelerated senescence strongly correlated with expression of p16 but not of p21. 20039273 2010
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.350 GeneticVariation disease BEFREE Exclusion of the genes CDKN2 and PTEN as causative gene defects in Li-Fraumeni syndrome. 10389970 1999
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.350 GeneticVariation disease BEFREE This article traces the historical aspects of hereditary cancer dealing with identification and ultimate molecular genetic confirmation of commonly occurring cancers, particularly of the colon in the case of familial adenomatous polyposis and its attenuated form, both due to the APC germline mutation; the Lynch syndrome due to mutations in mismatch repair genes, the most common of which were found to be MSH2, MLH1, and MSH6 germline mutations; the hereditary breast-ovarian cancer syndrome with BRCA1 and BRCA2 germline mutations; the Li-Fraumeni (SBLA) syndrome due to the p53 mutation; and the familial atypical multiple mole melanoma in association with pancreatic cancer due to the CDKN2A (p16) germline mutation. 15264268 2004
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.350 Biomarker disease BEFREE In addition, we found that p16 (INK4a) is also downregulated in immortal cells and that coexpression of CREG1 and p16 (INK4a) , an inhibitor of CDK4/6 and Rb phosphorylation, has a greater effect than either CREG1 and p16 (INK4a) alone to reduce cell growth, induce cell cycle arrest and cellular senescence in immortal LFS fibroblasts, osteosarcoma and fibrosarcoma cell lines. 21263217 2011
Entrez Id: 1030
Gene Symbol: CDKN2B
CDKN2B
0.010 Biomarker disease BEFREE <i>TP53</i> alterations are present in almost all cases of ALL with low hypodiploidy and are associated with alterations of the lymphoid transcription factor <i>IKZF2</i> and the tumor-suppressor gene loci <i>CDKN2A</i> and <i>CDKN2B.</i> Remarkably, more than half of <i>TP53</i> mutations in low-hypodiploid ALL in children are present in nontumor cells, indicating that low-hypodiploid ALL is a manifestation of Li-Fraumeni syndrome. 28003275 2017
Entrez Id: 1050
Gene Symbol: CEBPA
CEBPA
0.010 GeneticVariation disease BEFREE Genetic predispositions to myeloid malignancies can be classified into three categories: familial cancer syndromes associated with increased risk of various malignancies including myelodysplasia and acute myeloid leukemia such as Li-Fraumeni syndrome and constitutional mismatch repair deficiency (CMMRD); germline mutations conferring a specific increased risk of myelodysplastic syndrome and acute myeloid leukemia such as mutations in ANKRD26, CEBPA, DDX41, ETV6, GATA2, RUNX1, SRP72 genes; and finally primarily pediatric inherited bone marrow failure syndromes such as Fanconi anemia, dyskeratosis congenita, severe congenital neutropenia, Shwachman-Diamond syndrome and Diamond Blackfan anemia. 31203998 2019
Entrez Id: 1111
Gene Symbol: CHEK1
CHEK1
0.010 GeneticVariation disease BEFREE p53, CHK2, and CHK1 genes in Finnish families with Li-Fraumeni syndrome: further evidence of CHK2 in inherited cancer predisposition. 11479205 2001
Entrez Id: 11200
Gene Symbol: CHEK2
CHEK2
0.700 Biomarker disease CTD_human Our observations support the functional significance of CHK2 mutations in rare cases of LFS and suggest that such mutations may substitute for inactivation of TP53. 11719428 2001
Entrez Id: 11200
Gene Symbol: CHEK2
CHEK2
0.700 CausalMutation disease CLINVAR Rare, protein-truncating variants in ATM, CHEK2 and PALB2, but not XRCC2, are associated with increased breast cancer risks. 28779002 2017
Entrez Id: 11200
Gene Symbol: CHEK2
CHEK2
0.700 CausalMutation disease CLINVAR The contribution of CHEK2 to the TP53-negative Li-Fraumeni phenotype. 19338683 2009
Entrez Id: 11200
Gene Symbol: CHEK2
CHEK2
0.700 GeneticVariation disease BEFREE Our observations support the functional significance of CHK2 mutations in rare cases of LFS and suggest that such mutations may substitute for inactivation of TP53. 11719428 2001
Entrez Id: 11200
Gene Symbol: CHEK2
CHEK2
0.700 CausalMutation disease CLINVAR Our observations support the functional significance of CHK2 mutations in rare cases of LFS and suggest that such mutations may substitute for inactivation of TP53. 11719428 2001
Entrez Id: 11200
Gene Symbol: CHEK2
CHEK2
0.700 GeneticVariation disease BEFREE Two of the reported Chk2 mutations identified in Li-Fraumeni syndrome result in loss of Chk2 kinase activity. 11053450 2001