Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 7249
Gene Symbol: TSC2
TSC2
0.100 GeneticVariation disease BEFREE A TSC2-PKD1 contiguous gene syndrome caused by chromosomal microdeletions disrupting both the TSC2 and PKD1 genes has been identified in patients with TSC and early-onset severe ADPKD. 15007723 2004
Entrez Id: 7249
Gene Symbol: TSC2
TSC2
0.100 Biomarker disease BEFREE The major gene for ADPKD (PKD1) lies adjacent to the TSC2 gene on chromosome 16p13. 9631851 1998
Entrez Id: 7248
Gene Symbol: TSC1
TSC1
0.010 Biomarker disease BEFREE Among the inherited polycystic kidney diseases we include autosomal recessive polycystic kidney disease (ARPKD) and autosomal dominant polycystic diseases such as von Hippel-Lindau disease, tuberous sclerosis complex (TSC1 and TSC2), and autosomal dominant polycystic kidney disease (ADPKD). 15785425 2004
Entrez Id: 59341
Gene Symbol: TRPV4
TRPV4
0.010 Biomarker disease BEFREE We propose that TRPV4 stimulation may be beneficial for restoring [Ca<sup>2+</sup>]<sub>i</sub> homeostasis in cyst cells, thereby interfering with ADPKD progression.-Tomilin, V., Reif, G. A., Zaika, O., Wallace, D. P., Pochynyuk, O. Deficient transient receptor potential vanilloid type 4 function contributes to compromised [Ca<sup>2+</sup>]<sub>i</sub> homeostasis in human autosomal-dominant polycystic kidney disease cells. 29553832 2018
Entrez Id: 7225
Gene Symbol: TRPC6
TRPC6
0.010 GeneticVariation disease BEFREE TRPC6 dysfunction has been associated with the onset of focal segmental glomerosclerosis; TRPP2 dysfunction is linked to autosomal-dominant polycystic kidney disease, TRPM6 mutations underlie hypomagnesemia with secondary hypocalcemia, and TRPV1 dysfunction is implicated in renal hypertension. 19546862 2009
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.010 Biomarker disease BEFREE Consequently, the stimulation of cell death in ADPKD cells may occur through the inhibition of mTOR/MDM2 signaling and the restoring of p53 function. 29323708 2018
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.040 Biomarker disease BEFREE Thus, our mechanistic data characterize an apoptotic pathway, activated by the selective synergy of an Smac-mimetic and TNF-α in renal cyst fluid, that attenuates cyst development, providing an innovative translational platform for the rational development of novel therapeutics for ADPKD. 23990677 2013
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.040 Biomarker disease BEFREE A significant difference in nicotinamide adenine dinucleotide phosphate oxidase 2 concentrations was observed between T0 and T2 only in ADPKD patients treated with ALA (P = 0.039, P = 0.039; respectively), although we did not find a significant difference in interleukin-6, interleukin -1β, and tumor necrosis factor-α concentrations in either group. 31790890 2020
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.040 Biomarker disease BEFREE These pathways provide mechanisms by which SMYD2 might be induced by cyst fluid IL-6 and TNF-α in ADPKD kidneys. 28604386 2017
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.040 Biomarker disease BEFREE We show here that tumor necrosis factor-alpha (TNF-alpha), an inflammatory cytokine present in the cystic fluid of humans with ADPKD, disrupts the localization of polycystin-2 to the plasma membrane and primary cilia through a scaffold protein, FIP2, which is induced by TNF-alpha. 18552856 2008
Entrez Id: 3371
Gene Symbol: TNC
TNC
0.010 AlteredExpression disease BEFREE Immunohistochemically subepithelial fibrous tissue of cyst walls in ADPKD kidneys showed strong coexpression of both undulin and tenascin with marked intensity adjacent to cyst-lining epithelium. 7692313 1993
Entrez Id: 7076
Gene Symbol: TIMP1
TIMP1
0.010 Biomarker disease BEFREE Current data suggest that fibrosis associated with ADPKD shares at least some of the "classical" features of fibrosis in CKD (increased interstitial collagens, changes in matrix metalloproteinases (MMPs), over-expression of tissue inhibitor of metalloproteinase-1 (TIMP-1), over-expression of plasminogen activator inhibitor-1 (PAI-1) and increased transforming growth factor beta (TGFβ) but that there are also some unique and stage-specific features. 21745567 2011
Entrez Id: 7042
Gene Symbol: TGFB2
TGFB2
0.010 Biomarker disease BEFREE TGF-β2 was identified in conditioned media (CM) of NHK and ADPKD cells as a latent factor activated by heat in vitro. 22504005 2012
Entrez Id: 7040
Gene Symbol: TGFB1
TGFB1
0.010 GeneticVariation disease BEFREE Our results suggest that the polymorphism at Arg25Pro of TGF-beta1 in the Korean population has an allele distribution different from that ofthe Western population and that the polymorphism at Leu10Pro of TGF-beta1 has no association with the renal progression in Korean ADPKD patients. 12572925 2003
Entrez Id: 7039
Gene Symbol: TGFA
TGFA
0.010 AlteredExpression disease BEFREE In conclusion, the expression of Exo-1 in cyst-lining epithelial cells of autosomal dominant polycystic kidney disease (ADPKD) and the altered regulation of TGF-alpha and EGF receptor in these cells contribute to the hypothesis that hyperproliferation is an underlying pathogenic mechanism of ADPKD. 1739078 1992
Entrez Id: 9519
Gene Symbol: TBPL1
TBPL1
0.010 Biomarker disease BEFREE The list of confirmed 'channelopathies' is growing and several members of the TRP family of ion channels have been implicated in human diseases such as mucolipidosis type IV (MLIV), autosomal dominant polycystic kidney disease (ADPKD), familial focal segmental glomerulosclerosis (FSG), hypomagnesemia with secondary hypocalcaemia (HSH), and several forms of cancer. 17138610 2007
Entrez Id: 6901
Gene Symbol: TAZ
TAZ
0.010 Biomarker disease BEFREE While transgenic overexpression of YAP promotes proliferation and tubule dilation in mouse kidneys, loss of YAP/TAZ or c-Myc suppresses cystogenesis in a mouse ADPKD model resulting from <i>Pkd1</i> deficiency. 29891559 2018
Entrez Id: 6786
Gene Symbol: STIM1
STIM1
0.010 AlteredExpression disease BEFREE Stromal interaction molecule 1 (STIM1) protein expression was 15-fold higher in PC1-null proximal tubule cells (PN) than in heterozygote (PH) controls and 2-fold higher in an inducible, PC1 knockout, mouse model of ADPKD compared to a non-cystic match control. 30296477 2019
Entrez Id: 6779
Gene Symbol: STATH
STATH
0.010 GeneticVariation disease BEFREE In this study, we used fluorescent short tandem repeat (STR) markers to perform linkage analysis in six unrelated ADPKD families. 12440087 2002
Entrez Id: 6778
Gene Symbol: STAT6
STAT6
0.010 Biomarker disease BEFREE STAT6 is aberrantly active in PKD mouse models and human ADPKD, and genetic removal or pharmacological inhibition of STAT6 attenuates disease progression. 29513071 2018
Entrez Id: 6777
Gene Symbol: STAT5B
STAT5B
0.010 AlteredExpression disease BEFREE To study whether STAT5 is abnormally activated in vivo, we analyzed its expression using two independent mouse models of ADPKD. 28104302 2017
Entrez Id: 6776
Gene Symbol: STAT5A
STAT5A
0.010 AlteredExpression disease BEFREE To study whether STAT5 is abnormally activated in vivo, we analyzed its expression using two independent mouse models of ADPKD. 28104302 2017
Entrez Id: 6774
Gene Symbol: STAT3
STAT3
0.040 Biomarker disease BEFREE Our results suggest that PC1 acts as a negative regulator of STAT3 and that blocking STAT3 signaling with pyrimethamine or similar drugs may be an attractive therapy for human ADPKD. 21821671 2011
Entrez Id: 6774
Gene Symbol: STAT3
STAT3
0.040 AlteredExpression disease BEFREE STAT3 is strongly activated in cyst-lining epithelial cells in human ADPKD, and orthologous and nonorthologous polycystic mouse models. 21518865 2011
Entrez Id: 6774
Gene Symbol: STAT3
STAT3
0.040 PosttranslationalModification disease BEFREE JAK2 inhibition led to significantly reduced tyrosine phosphorylation of STAT3 and markedly reduced cystic growth of human and mouse ADPKD-derived cells in cystogenesis assays. 30872773 2019