Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 57216
Gene Symbol: VANGL2
VANGL2
0.010 AlteredExpression disease BEFREE Differences in ATMIN and VANGL2 expression were observed between normal human paediatric kidneys and age-matched ARPKD kidneys. 30414501 2019
Entrez Id: 8289
Gene Symbol: ARID1A
ARID1A
0.010 GeneticVariation disease BEFREE Mutations in AT-rich interactive domain-containing protein 1A (ARID1A), polycystic kidney and hepatic disease 1 (PKHD1), ubiquitin-protein ligase E3 component n-recognin 5 (UBR5), paired box 5 (PAX5), tumor protein p53 (TP53), additional sex combs like 1 (ASXL1) and androgen receptor (AR) genes were detected more frequently in group A. 30804124 2019
Entrez Id: 23500
Gene Symbol: DAAM2
DAAM2
0.010 AlteredExpression disease BEFREE Significant increases in ATMIN, WNT5A, VANGL2 and SCRIBBLE were seen in human ARPKD versus normal kidneys; no substantial differences were seen in DAAM2 or NPHP2. 30414501 2019
Entrez Id: 23513
Gene Symbol: SCRIB
SCRIB
0.010 AlteredExpression disease BEFREE Significant increases in ATMIN, WNT5A, VANGL2 and SCRIBBLE were seen in human ARPKD versus normal kidneys; no substantial differences were seen in DAAM2 or NPHP2. 30414501 2019
Entrez Id: 2042
Gene Symbol: EPHA3
EPHA3
0.010 Biomarker disease BEFREE To determine whether defects in other human cystoproteins have similar effects, we studied extracellular acidification and glucose metabolism in human embryonic kidney (HEK-293) cell lines with polycystic kidney and hepatic disease 1 ( PKHD1) and polycystic kidney disease (PKD) 2 ( PKD2) truncating defects along multiple sites of truncating mutations found in patients with autosomal recessive and dominant PKDs. 30566001 2019
Entrez Id: 23300
Gene Symbol: ATMIN
ATMIN
0.010 AlteredExpression disease BEFREE Differences in ATMIN and VANGL2 expression were observed between normal human paediatric kidneys and age-matched ARPKD kidneys. 30414501 2019
Entrez Id: 1822
Gene Symbol: ATN1
ATN1
0.010 GeneticVariation disease BEFREE In this article, we demonstrate that ABD in NOD.c3c4 and related NOD ABD strains is caused by a chromosome 1 region that includes a novel mutation in polycystic kidney and hepatic disease 1 (<i>Pkhd1</i>). 29158418 2018
Entrez Id: 4088
Gene Symbol: SMAD3
SMAD3
0.010 Biomarker disease BEFREE Aberrant Smad3 phosphoisoforms in cyst-lining epithelial cells in the <i>cpk</i> mouse, a model of autosomal recessive polycystic kidney disease. 28877884 2017
Entrez Id: 4734
Gene Symbol: NEDD4
NEDD4
0.010 Biomarker disease BEFREE NEDD4-family E3 ligase dysfunction due to PKHD1/Pkhd1 defects suggests a mechanistic model for ARPKD pathobiology. 28798345 2017
Entrez Id: 22897
Gene Symbol: CEP164
CEP164
0.010 Biomarker disease BEFREE We recently reported that centrosomal protein 164 (CEP164) regulates both cilia and the DNA damage response in the autosomal recessive polycystic kidney disease nephronophthisis. 25340510 2014
Entrez Id: 846
Gene Symbol: CASR
CASR
0.010 GeneticVariation disease BEFREE On the other hand, liver weight and biliary cystogenesis revealed no differences between PCK and FHH.Pkdh1, indicating that genes within the FHH genetic background prevent the development of renal, but not hepatic, manifestations of ARPKD. 22669842 2012
Entrez Id: 60
Gene Symbol: ACTB
ACTB
0.010 Biomarker disease BEFREE Paxillin coimmunoprecipitation analyses suggested that fibrocystin-1 was a component of the normal focal adhesion complex and that actin and fibrocystin-1 were lost from ARPKD complexes. 19923420 2010
Entrez Id: 5829
Gene Symbol: PXN
PXN
0.010 Biomarker disease BEFREE Paxillin coimmunoprecipitation analyses suggested that fibrocystin-1 was a component of the normal focal adhesion complex and that actin and fibrocystin-1 were lost from ARPKD complexes. 19923420 2010
Entrez Id: 6779
Gene Symbol: STATH
STATH
0.010 GeneticVariation disease BEFREE We have developed 20 polymorphic STR markers suitable for linkage analysis of ARPKD. 20490649 2010
Entrez Id: 554
Gene Symbol: AVPR2
AVPR2
0.010 Biomarker disease BEFREE It is notable that vasopressin V2 receptor antagonists can inhibit/halt the renal cystic disease progression in an orthologous rat model of human ARPKD. 17160262 2006
Entrez Id: 7369
Gene Symbol: UMOD
UMOD
0.010 AlteredExpression disease BEFREE In these cases, the expression of PKHD1 (polycystic kidney and hepatic disease 1) and UMOD (Uromodulin), two genes regulated by HNF1beta, was turned off. 15649945 2005
Entrez Id: 4172
Gene Symbol: MCM3
MCM3
0.010 Biomarker disease BEFREE Genomic structure of the gene for the human P1 protein (MCM3) and its exclusion as a candidate for autosomal recessive polycystic kidney disease. 10780780 2000
Entrez Id: 55248
Gene Symbol: PACC1
PACC1
0.010 Biomarker disease BEFREE We have developed a sequence-ready BAC/PAC-based contig map of this region as the next step for the positional cloning of PKHD1. 10198164 1999
Entrez Id: 5961
Gene Symbol: PRPH2
PRPH2
0.010 GeneticVariation disease BEFREE Fine mapping of the autosomal recessive polycystic kidney disease locus (PKHD1) and the genes MUT, RDS, CSNK2 beta, and GSTA1 at 6p21.1-p12. 9503014 1998
Entrez Id: 2938
Gene Symbol: GSTA1
GSTA1
0.010 GeneticVariation disease BEFREE Fine mapping of the autosomal recessive polycystic kidney disease locus (PKHD1) and the genes MUT, RDS, CSNK2 beta, and GSTA1 at 6p21.1-p12. 9503014 1998
Entrez Id: 7263
Gene Symbol: TST
TST
0.010 GeneticVariation disease BEFREE Fine mapping of the autosomal recessive polycystic kidney disease locus (PKHD1) and the genes MUT, RDS, CSNK2 beta, and GSTA1 at 6p21.1-p12. 9503014 1998
Entrez Id: 9033
Gene Symbol: PKD2L1
PKD2L1
0.010 Biomarker disease BEFREE PKD2L is localized to chromosome 10q25 and is excluded as a candidate gene for autosomal recessive polycystic kidney disease, autosomal dominant polycystic liver disease, and the third form of ADPKD. 9878261 1998
Entrez Id: 348
Gene Symbol: APOE
APOE
0.010 Biomarker disease BEFREE The most striking phenotypic aberration in the ApoE-hKGF transgenic embryos was marked hyperplasia and cystic dilation of the cortical and medullary kidney collecting duct system, a phenotype resembling infantile polycystic kidney disease in humans. 8668336 1996
Entrez Id: 5111
Gene Symbol: PCNA
PCNA
0.010 Biomarker disease BEFREE In this study, which used immunohistochemical methods with an antibody to proliferating cell nuclear antigen (PCNA), the proliferation index (PI) (percentage of PCNA positive cell nuclei among epithelial cells lining the renal cysts) was determined in 10 cases of autosomal dominant polycystic kidney disease (ADPKD), 8 cases of autosomal recessive polycystic kidney disease (ARPKD), and 8 cases of acquired cystic kidney disease (ACKD). 7703384 1995
Entrez Id: 4224
Gene Symbol: MEP1A
MEP1A
0.010 Biomarker disease BEFREE The results from both physical and genetic mapping exclude MEP1A as a candidate for ARPKD. 7488157 1995