Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 3123
Gene Symbol: HLA-DRB1
HLA-DRB1
0.080 GeneticVariation disease BEFREE In Caucasians, compared to never-smokers without HLA-DRB1*03:01 allele, ever-smokers with HLA-DRB1*03:01 allele had the highest odds of PM, ILD, ASA, and anti-Jo-1 autoantibodies. 29703532 2018
Entrez Id: 3123
Gene Symbol: HLA-DRB1
HLA-DRB1
0.080 GeneticVariation disease BEFREE DRB1*08 alleles were significantly increased in patients (36.9 vs 20.5% in controls; p=0.004, OR=2.3), especially in PM and DM. 9632072 1998
Entrez Id: 3123
Gene Symbol: HLA-DRB1
HLA-DRB1
0.080 GeneticVariation disease BEFREE HLA-DRB1 and HLA-DPB1 alleles and MSAs were examined in 179 patients with dermatomyositis (DM, n = 129) or polymyositis (PM, n = 50) and healthy controls (n = 800 for HLA-DRB1, n = 548 for HLA-DPB1). 30952422 2019
Entrez Id: 3123
Gene Symbol: HLA-DRB1
HLA-DRB1
0.080 Biomarker disease BEFREE HLA-DRB1 studies in a large homogenous cohort of UK Caucasian patients have confirmed that polymyositis (PM) and dermatomyositis (DM) are not genetically identical diseases while other studies have shown that tumor necrosis factor alpha is genetically implicated in disease susceptibility. 15577608 2004
Entrez Id: 3123
Gene Symbol: HLA-DRB1
HLA-DRB1
0.080 GeneticVariation disease BEFREE In contrast to European American patients with IIM, African American patients with IIM, in particular those with polymyositis, had no strong disease associations with HLA alleles of the 8.1 ancestral haplotype; however, African Americans with dermatomyositis or with anti-Jo-1 autoantibodies shared the risk factor HLA-DRB1*0301 with European Americans. 17075818 2006
Entrez Id: 3123
Gene Symbol: HLA-DRB1
HLA-DRB1
0.080 GeneticVariation disease BEFREE Furthermore, the frequency of the HLA-DRB1*0405-DQA1*03-DQB1*0401 haplotype was higher in the PM patients with PI than in the controls (50.0% vs 17.7%), and PM without PI (50.0% vs 5.5%). 11972875 2002
Entrez Id: 3123
Gene Symbol: HLA-DRB1
HLA-DRB1
0.080 GeneticVariation disease BEFREE In addition, there appeared to be a negative association of the HLA-DR2 alleles (DRB1*1501 and *1503) with PM (P = 0.007, Pcorr not significant, OR = 0.39), but not with DM or myositis overall. 8814062 1996
Entrez Id: 7098
Gene Symbol: TLR3
TLR3
0.040 AlteredExpression disease BEFREE To assess the expression of Toll-like receptor 3 (TLR-3) and TLR-7 in muscle tissue from patients with polymyositis (PM) and dermatomyositis (DM) and to investigate the function and regulation of TLR-3 in cultured muscle cells. 20309865 2010
Entrez Id: 7098
Gene Symbol: TLR3
TLR3
0.040 AlteredExpression disease BEFREE The characteristic intracellular localization of HBD-3 near markers of degeneration and autophagy, and overexpression of endosomal TLR3 in sIBM hint at different pathogenetic mechanisms in sIBM compared with PM. 23608825 2014
Entrez Id: 6962
Gene Symbol: TRBV20OR9-2
TRBV20OR9-2
0.040 GeneticVariation disease BEFREE The TCR was first identified in a rare form of polymyositis characterized by a monoclonal infiltrate of gammadelta T cells which invaded and destroyed skeletal muscle fibers. 12077283 2002
Entrez Id: 6962
Gene Symbol: TRBV20OR9-2
TRBV20OR9-2
0.040 GeneticVariation disease BEFREE A variety of rearranged variable TCR genes was found in polymyositis, V alpha 1, V alpha 5, V beta 1, and V beta 15 being the most common (present in 60-100% of patients). 8514895 1993
Entrez Id: 7098
Gene Symbol: TLR3
TLR3
0.040 AlteredExpression disease BEFREE TLR3 was upregulated particularly in JDM, being localized on vascular endothelial cells, muscle infiltrating cells (mainly myeloid dendritic cells), and regenerating myofibers; TLR7 and TLR9 proteins were present in IIM (prominently in PM), mainly on cell infiltrates, particularly plasma cells, and on some injured myofibers. 21670437 2011
Entrez Id: 6962
Gene Symbol: TRBV20OR9-2
TRBV20OR9-2
0.040 AlteredExpression disease BEFREE We utilized the PCR to study TCR V gene expression in muscle biopsies from nine polymyositis (PM) and eight dermatomyositis (DM) patients, all of whom had autoantibodies directed against histidyl-transfer RNA synthetase (anti-Jo-1 autoantibodies). 8133064 1994
Entrez Id: 7098
Gene Symbol: TLR3
TLR3
0.040 Biomarker disease BEFREE Co-localization between autophagic marker, LC3, and TLR4 and TLR3 was observed not only in sIBM but also in PM, DM and JDM muscle tissues. 25365350 2014
Entrez Id: 6962
Gene Symbol: TRBV20OR9-2
TRBV20OR9-2
0.040 AlteredExpression disease BEFREE In an attempt to understand the significance of gamma delta T cells in the IIM, we utilized a sensitive polymerase chain reaction (PCR) technique to evaluate gamma delta T cell receptor (TCR) gene expression in 45 muscle biopsies obtained from 42 IIM patients (17 polymyositis, 12 dermatomyositis, and 13 inclusion body myositis). gamma delta TCR gene expression was not detected in 36 specimens, the majority of muscle biopsies surveyed. gamma delta TCR gene expression by muscle-infiltrating lymphocytes was detected among nine clinically heterogeneous patients. 7774065 1995
Entrez Id: 1756
Gene Symbol: DMD
DMD
0.030 Biomarker disease BEFREE Dystrophin abnormalities in polymyositis and dermatomyositis. 1822343 1991
Entrez Id: 1756
Gene Symbol: DMD
DMD
0.030 Biomarker disease BEFREE This produced a 15-17-fold increase of DRP over normal in DMD/BMD and 4-10-fold increase over normal in PM and DM on immunoblots. 8440993 1993
Entrez Id: 4318
Gene Symbol: MMP9
MMP9
0.030 Biomarker disease BEFREE Quantitative polymerase chain reaction analysis revealed significantly elevated mRNA expression of interstitial collagenase (MMP-1) and gelatinase B (MMP-9) in polymyositis and dermatomyositis and to a lesser extent in inclusion body myositis, whereas the level of expression of TIMPs remained unchanged in comparison with controls. 11157561 2001
Entrez Id: 8291
Gene Symbol: DYSF
DYSF
0.030 Biomarker disease BEFREE These findings differ from polymyositis (PM) but are closely similar to those in SJL/J mice (which lack dysferlin) and emphasize the relationship between absence of dysferlin and immune system abnormalities in muscle. 14512171 2003
Entrez Id: 2965
Gene Symbol: GTF2H1
GTF2H1
0.030 Biomarker disease BEFREE Probably p62 immunostaining could help to distinguish PM patients that are going to become sIBM, but to date there has been no systematic study to clarify p62 utility in myositis. 31253480 2019
Entrez Id: 7422
Gene Symbol: VEGFA
VEGFA
0.030 Biomarker disease BEFREE Furthermore, in the PM and DM groups, the expression levels of Cyr61, CTGF, and VEGF in serum at 6 months after treatment were lower than those before treatment (P < .05).Cyr61, CTGF, and VEGF are involved in the pathogenesis of PM/DM. 30142763 2018
Entrez Id: 84618
Gene Symbol: NT5C1A
NT5C1A
0.030 GeneticVariation disease BEFREE The current study demonstrated the potential use of calcineurin inhibitor (CNI) in combination therapy for interstitial lung disease (ILD) complicated with dermatomyositis (DM) and polymyositis (PM). 28225510 2017
Entrez Id: 23636
Gene Symbol: NUP62
NUP62
0.030 Biomarker disease BEFREE To determine the clinical features of myositis patients with the histopathologic finding of CD8-positive T cells invading non-necrotic muscle fibers expressing major histocompatibility complex class 1 (CD8-MHC-1 complex), which is shared by polymyositis (PM) and inclusion body myositis (IBM), in relation to the p62 immunostaining pattern of muscle fibers. 28794251 2017
Entrez Id: 8878
Gene Symbol: SQSTM1
SQSTM1
0.030 Biomarker disease BEFREE The prominent p62 immunohistochemical positivity and pattern diagnostically distinguish s-IBM from polymyositis and dermatomyositis. 19557423 2009
Entrez Id: 51284
Gene Symbol: TLR7
TLR7
0.030 Biomarker disease BEFREE TLR3 was upregulated particularly in JDM, being localized on vascular endothelial cells, muscle infiltrating cells (mainly myeloid dendritic cells), and regenerating myofibers; TLR7 and TLR9 proteins were present in IIM (prominently in PM), mainly on cell infiltrates, particularly plasma cells, and on some injured myofibers. 21670437 2011