Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 3458
Gene Symbol: IFNG
IFNG
0.100 Biomarker disease BEFREE <b>Methods:</b> Peripheral blood mononuclear cells from subjects with latent MTB infection (<i>n</i> = 16) and aTB (<i>n</i> = 39) at baseline, weeks 9, 12, and 26 (end of treatment) were analyzed after intracellular interferon gamma staining and overnight stimulation with tuberculin. 30323818 2018
Entrez Id: 3458
Gene Symbol: IFNG
IFNG
0.100 Biomarker disease BEFREE <b>Methods:</b> Screening for TB was performed in children in asylum seeker reception centres by tuberculin skin test (TST) or interferon gamma release assay (IGRA). 29589578 2018
Entrez Id: 1234
Gene Symbol: CCR5
CCR5
0.020 Biomarker disease BEFREE CCR5 is the major coreceptor used by HIV-1 subtype C isolates from patients with active tuberculosis. 11429110 2001
Entrez Id: 6556
Gene Symbol: SLC11A1
SLC11A1
0.020 GeneticVariation disease BEFREE SLC11A1 polymorphism rs3731865 was associated with TB in African-Americans, consistent with previous findings in West Africans. 19723394 2009
Entrez Id: 29126
Gene Symbol: CD274
CD274
0.010 AlteredExpression disease BEFREE Programmed death ligand 1 is over-expressed by neutrophils in the blood of patients with active tuberculosis. 21509782 2011
Entrez Id: 3458
Gene Symbol: IFNG
IFNG
0.100 Biomarker disease BEFREE Interferon-gamma release assay (IGRA) is a good indicator for latent TB but can it be useful as a diagnostic tool for active TB? 22240431 2012
Entrez Id: 3586
Gene Symbol: IL10
IL10
0.060 GeneticVariation disease BEFREE IL-10 (-1082) GG genotype was positively associated with HIV-TB, whereas AG with HIV and AA with TB. 22507621 2012
Entrez Id: 693167
Gene Symbol: MIR582
MIR582
0.020 AlteredExpression disease BEFREE miR-582-5p is upregulated in patients with active tuberculosis and inhibits apoptosis of monocytes by targeting FOXO1. 24205217 2013
Entrez Id: 2309
Gene Symbol: FOXO3
FOXO3
0.010 GeneticVariation disease BEFREE FOXO3 rs12212067: T > G Association with Active Tuberculosis in Han Chinese Population. 26223437 2016
Entrez Id: 406947
Gene Symbol: MIR155
MIR155
0.030 AlteredExpression disease BEFREE MiR-155 is upregulated in patients with active tuberculosis and inhibits apoptosis of monocytes by targeting FOXO3. 26324048 2015
Entrez Id: 3553
Gene Symbol: IL1B
IL1B
0.060 Biomarker disease BEFREE Interleukin-1 beta (IL-1 β) signaling is known to be high in active tuberculosis. 27661435 2017
Entrez Id: 4498
Gene Symbol: MT1JP
MT1JP
0.010 Biomarker disease BEFREE Mtb genes expressed in classical granulomas with central, caseous necrosis, as well as within the caseum itself, were identified and compared with other Mtb lesions in animals with ATB (n = 7) or LTBI (n = 7). 28135421 2017
Entrez Id: 54892
Gene Symbol: NCAPG2
NCAPG2
0.010 Biomarker disease BEFREE Mtb genes expressed in classical granulomas with central, caseous necrosis, as well as within the caseum itself, were identified and compared with other Mtb lesions in animals with ATB (n = 7) or LTBI (n = 7). 28135421 2017
Entrez Id: 55647
Gene Symbol: RAB20
RAB20
0.010 AlteredExpression disease BEFREE Rab20 is specifically and significantly upregulated in the sputum of human patients with active tuberculosis. 28494243 2017
Entrez Id: 3605
Gene Symbol: IL17A
IL17A
0.050 Biomarker disease BEFREE IL17A augments autophagy in Mycobacterium tuberculosis-infected monocytes from patients with active tuberculosis in association with the severity of the disease. 28581888 2017
Entrez Id: 9636
Gene Symbol: ISG15
ISG15
0.010 Biomarker disease BEFREE ISG15-Induced IL-10 Is a Novel Anti-Inflammatory Myeloid Axis Disrupted during Active Tuberculosis. 29311364 2018
Entrez Id: 10219
Gene Symbol: KLRG1
KLRG1
0.010 AlteredExpression disease BEFREE KLRG1 expression on CD4+ T cells was significantly increased in patients with active tuberculosis, compared with healthy controls and patients without tuberculosis. 29373700 2018
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.100 GeneticVariation disease BEFREE Tumor necrosis factor alpha (TNF-α) inhibitors are linked with increased risk of reactivation of active tuberculosis. 29562270 2018
Entrez Id: 3605
Gene Symbol: IL17A
IL17A
0.050 Biomarker disease BEFREE IL-17 and IL-22 production in HIV+ individuals with latent and active tuberculosis. 29996789 2018
Entrez Id: 3458
Gene Symbol: IFNG
IFNG
0.100 Biomarker disease BEFREE Interferon gamma release assay (IGRA) is the preferred diagnostic test for latent TB but can produce an indeterminate result. 30151410 2018
Entrez Id: 3458
Gene Symbol: IFNG
IFNG
0.100 Biomarker disease BEFREE Interferon gamma release assays for Diagnostic Evaluation of Active tuberculosis (IDEA): test accuracy study and economic evaluation. 31138395 2019
Entrez Id: 3458
Gene Symbol: IFNG
IFNG
0.100 Biomarker disease BEFREE Interferon gamma (IFN-γ) values in response to TB antigen and mitogen were significantly higher in children than in adults (TB antigen, median of 10 versus 1.66 IU IFN-γ/ml; mitogen, median of 10 versus 6.70 IU IFN-γ/ml; <i>P</i> < 0.0001). 31391228 2019
Entrez Id: 57570
Gene Symbol: TRMT5
TRMT5
0.010 GeneticVariation disease BEFREE A 5-protein signature, TB Risk Model 5 (TRM5), was discovered in the ACS training set and verified by blind prediction in the ACS test set. 30990820 2019
Entrez Id: 6962
Gene Symbol: TRBV20OR9-2
TRBV20OR9-2
0.010 Biomarker disease BEFREE A Diverse Lipid Antigen-Specific TCR Repertoire Is Clonally Expanded during Active Tuberculosis. 29914888 2018
Entrez Id: 114548
Gene Symbol: NLRP3
NLRP3
0.020 GeneticVariation disease BEFREE Activation of the NLRP3 inflammasome by Mycobacterium tuberculosis is uncoupled from susceptibility to active tuberculosis. 22101787 2012