Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 4089
Gene Symbol: SMAD4
SMAD4
0.010 GeneticVariation disease BEFREE They both had de novo c.1498A > G (p.Ile500Val) variant in SMAD4 and presented with key characteristics of Myhre syndrome but also revealed uncommon features (polydactyly in the girl and precocious puberty in the boy). 31654632 2020
Entrez Id: 2006
Gene Symbol: ELN
ELN
0.010 AlteredExpression disease BEFREE Immunohistochemically, elastin was rarely expressed in the nail matrix onychodermis while it was strongly expressed in the dermis of other areas of polydactyly nail units. 30893489 2019
Entrez Id: 169436
Gene Symbol: STKLD1
STKLD1
0.010 GeneticVariation disease BEFREE Whole-exome sequencing revealed a nonsense mutation in STKLD1 causing non-syndromic pre-axial polydactyly type A affecting only upper limb. 30945277 2019
Entrez Id: 8655
Gene Symbol: DYNLL1
DYNLL1
0.010 Biomarker disease BEFREE Interestingly, phenotypes of Dynll1-deficient mice are very similar to entirely cilia-deficient Kif3a/Ift88-null mice, except that they never present with polydactyly and retain relatively higher signaling outputs in parts of the hedgehog pathway. 31009951 2019
Entrez Id: 83871
Gene Symbol: RAB34
RAB34
0.010 GeneticVariation disease BEFREE We also show that Rab34 mutant mice exhibit polydactyly, and cleft-lip and -palate. 30301781 2018
Entrez Id: 80210
Gene Symbol: ARMC9
ARMC9
0.010 GeneticVariation disease BEFREE Whole exome sequencing reveals a mutation in ARMC9 as a cause of mental retardation, ptosis, and polydactyly. 29159890 2018
Entrez Id: 22943
Gene Symbol: DKK1
DKK1
0.010 Biomarker disease BEFREE Dkk1 KO mice showed a high bone mass phenotype exceeding that of heterozygous mice as well as a high incidence of polydactyly and kinky tails. 29105022 2018
Entrez Id: 6295
Gene Symbol: SAG
SAG
0.010 Biomarker disease BEFREE The most prevalent effect of SAG was the dose-dependent induction of pre-axial polydactyly; defects ranged from a broad thumb to the duplication of two finger-like digits on the preaxial side of the thumb. 27801979 2017
Entrez Id: 4311
Gene Symbol: MME
MME
0.010 Biomarker disease BEFREE CD10 and CD13 immunohistochemistry was performed on polydactyly and adult cadaveric nail units, and on hair follicles in scalp nevus sebaceus excision specimens. 28708295 2017
Entrez Id: 23288
Gene Symbol: IQCE
IQCE
0.010 GeneticVariation disease BEFREE Exome sequencing revealed a splice site variant in the IQCE gene underlying post-axial polydactyly type A restricted to lower limb. 28488682 2017
Entrez Id: 7040
Gene Symbol: TGFB1
TGFB1
0.010 Biomarker disease BEFREE The hChonJ cells were isolated from a polydactyly donor, and TGF-β1 cDNA was delivered to the cells, generating hChonJb#7 cells. 28521800 2017
Entrez Id: 23062
Gene Symbol: GGA2
GGA2
0.010 GeneticVariation disease BEFREE The G/T mutation of SNP rs80659072 in the Shh long-range regulator of GGA2 is highly associated with the polydactyly phenotype in some chicken breeds. 29016641 2017
Entrez Id: 23590
Gene Symbol: PDSS1
PDSS1
0.010 AlteredExpression disease BEFREE Triphalangeal thumb‑polysyndactyly syndrome (TPT‑PS) is an autosomal dominant disorder with complete penetrance and a variable expression consisting of opposable triphalangeal thumbs, duplication of the distal thumb phalanx, pre‑axial polydactyly and duplication of the big toes (hallux). 28035386 2017
Entrez Id: 90226
Gene Symbol: UCN2
UCN2
0.010 Biomarker disease BEFREE Characteristic findings among all forms of SRP include short horizontal ribs, short limbs and polydactyly. 27925158 2017
Entrez Id: 290
Gene Symbol: ANPEP
ANPEP
0.010 Biomarker disease BEFREE CD10 and CD13 immunohistochemistry was performed on polydactyly and adult cadaveric nail units, and on hair follicles in scalp nevus sebaceus excision specimens. 28708295 2017
Entrez Id: 84314
Gene Symbol: TMEM107
TMEM107
0.010 GeneticVariation disease BEFREE Here, we describe a patient with a mutation in TMEM107 that developed atypical Orofaciodigital syndrome (OFD), and show that the OFD patient shares several morphological features with the Tmem107 mutant mouse including polydactyly and reduced numbers of ciliated cells. 26518474 2016
Entrez Id: 157657
Gene Symbol: C8orf37
C8orf37
0.010 GeneticVariation disease BEFREE This report extends the genotypic spectrum of C8orf37-associated retinal dystrophies and demonstrates for the first time a genotype-phenotype correlation between an arCRD-polydactyly-association and truncating germline mutations affecting the N-terminal region of the protein. 26865426 2016
Entrez Id: 100126595
Gene Symbol: MGS
MGS
0.010 Biomarker disease BEFREE MGS presents with polycystic kidneys, occipital encephalocele, and polydactyly; it is typically perinatally fatal. 27449316 2016
Entrez Id: 266719
Gene Symbol: RRDX
RRDX
0.010 Biomarker disease BEFREE Point mutations and duplications of the ZRS lead to a variable phenotype of preaxial polydactyly/triphalangeal thumb, tibial hypoplasia, radial ray deficiency, and type IV familial syndactyly (syndactyly of all digits with polydactyly). 23686920 2013
Entrez Id: 2239
Gene Symbol: GPC4
GPC4
0.010 Biomarker disease BEFREE GPC5 and GPC6 show homology with GPC3 and GPC4, genes involved in Simpson-Golabi-Behmel syndrome, an overgrowth syndrome in which also polydactyly can occur. 19941983 2010
Entrez Id: 5092
Gene Symbol: PCBD1
PCBD1
0.010 GeneticVariation disease BEFREE This includes 19 probands (12 mutations) who fulfilled clinical criteria for GCPS or PHS, 48 probands (16 mutations) with features of GCPS or PHS but who did not meet the clinical criteria (sub-GCPS and sub-PHS), 21 probands (6 mutations) with features of PHS or GCPS and oral-facial-digital syndrome, and 5 probands (1 mutation) with nonsyndromic polydactyly. 20672375 2010
Entrez Id: 6046
Gene Symbol: BRD2
BRD2
0.010 GeneticVariation disease BEFREE Her mother and seven relatives harboring the same mutation had polydactyly, including two uncles with IGHD and one cousin with GH, TSH, LH, and FSH deficiencies. 20685856 2010
Entrez Id: 7289
Gene Symbol: TULP3
TULP3
0.010 Biomarker disease BEFREE Mouse hitchhiker mutants have spina bifida, dorso-ventral patterning defects and polydactyly: identification of Tulp3 as a novel negative regulator of the Sonic hedgehog pathway. 19223390 2009
Entrez Id: 7050
Gene Symbol: TGIF1
TGIF1
0.010 Biomarker disease BEFREE We performed mutational analysis in the four main HPE causing genes (SHH, SIX3, TGIF, and ZIC2) and GLI3, a gene associated with polydactyly as well as fluorescent in situ hybridization (FISH) to search for microdeletions in these genes and two candidate HPE genes (DISP1 and FOXA2). 18178536 2008
Entrez Id: 7546
Gene Symbol: ZIC2
ZIC2
0.010 Biomarker disease BEFREE We performed mutational analysis in the four main HPE causing genes (SHH, SIX3, TGIF, and ZIC2) and GLI3, a gene associated with polydactyly as well as fluorescent in situ hybridization (FISH) to search for microdeletions in these genes and two candidate HPE genes (DISP1 and FOXA2). 18178536 2008