Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 7421
Gene Symbol: VDR
VDR
0.100 GeneticVariation disease BEFREE This study revealed that the Tt allele of the vitamin-D receptor gene was more frequently associated with multilevel and severe disc degeneration and disc herniation than was the TT allele, pointing to an increased risk of disc disease at an early age in subjects with the Tt allele in the vitamin-D receptor gene. 12429765 2002
Entrez Id: 3552
Gene Symbol: IL1A
IL1A
0.080 GeneticVariation disease BEFREE IL-1 gene cluster polymorphisms could affect the risk of disc degeneration. 15308963 2004
Entrez Id: 3552
Gene Symbol: IL1A
IL1A
0.080 GeneticVariation disease BEFREE We performed a meta-analysis to assess association between interleukin 1 (IL-1) polymorphisms and the risk of Intervertebral Disc Degeneration (IDD). 27253397 2016
Entrez Id: 1299
Gene Symbol: COL9A3
COL9A3
0.060 GeneticVariation disease BEFREE COL9A3 gene polymorphism and obesity in intervertebral disc degeneration of the lumbar spine: evidence of gene-environment interaction. 12461395 2002
Entrez Id: 1299
Gene Symbol: COL9A3
COL9A3
0.060 GeneticVariation disease BEFREE Association of COL9A3 trp3 polymorphism with intervertebral disk degeneration: a meta-analysis. 30342505 2018
Entrez Id: 1299
Gene Symbol: COL9A3
COL9A3
0.060 GeneticVariation disease BEFREE The results suggest that the effect of the COL9A3 gene polymorphism on DD might be modified by the IL-1beta gene polymorphism. 16133074 2006
Entrez Id: 4314
Gene Symbol: MMP3
MMP3
0.060 GeneticVariation disease BEFREE In addition, disc degeneration has been shown to be related to an aggrecan gene polymorphism, a vitamin D receptor and matrix metalloproteinase-3 gene alleles. 12014433 2002
Entrez Id: 4314
Gene Symbol: MMP3
MMP3
0.060 GeneticVariation disease BEFREE Tryptophan alleles in COL9A2 and COL9A3 have been shown to be associated with lumbar disc disease in the Finnish population, and polymorphisms in the vitamin D receptor gene (VDR) (FokI and TaqI), the matrix metalloproteinase-3 gene (MMP-3) and an aggrecan gene (AGC1) VNTR have been reported to be associated with disc degeneration. 14644861 2003
Entrez Id: 1299
Gene Symbol: COL9A3
COL9A3
0.060 GeneticVariation disease BEFREE Degeneration scores were significantly worse in cases with COL1A1 Sp1, COL9a3 Trp3, and VDR TaqI mutations; however, COL9a2 Trp2 mutation was not associated with a difference in the severity of disc degeneration. 26342701 2015
Entrez Id: 1299
Gene Symbol: COL9A3
COL9A3
0.060 GeneticVariation disease BEFREE Tryptophan alleles in COL9A2 and COL9A3 have been shown to be associated with lumbar disc disease in the Finnish population, and polymorphisms in the vitamin D receptor gene (VDR) (FokI and TaqI), the matrix metalloproteinase-3 gene (MMP-3) and an aggrecan gene (AGC1) VNTR have been reported to be associated with disc degeneration. 14644861 2003
Entrez Id: 4314
Gene Symbol: MMP3
MMP3
0.060 GeneticVariation disease BEFREE Protein levels and immunopositive cell rates of MMP-1 and MMP-3 were associated with disc degeneration grades. 27706715 2016
Entrez Id: 1280
Gene Symbol: COL2A1
COL2A1
0.050 GeneticVariation disease BEFREE Our study provides evidence that COL2A1 and Aggrecan genetic polymorphisms may be correlated with the risk and clinicopathological features of IVDD in a Chinese Han population, and ACGL and GTCL haplotypes may be protective factors of IVDD. 27991836 2017
Entrez Id: 8200
Gene Symbol: GDF5
GDF5
0.050 GeneticVariation disease BEFREE Several studies have assessed the association between GDF5 rs143383 polymorphism and the susceptibility of musculoskeletal degenerative diseases, such as intervertebral disc degeneration (IDD) and osteoarthritis (OA), but the results are inconsistent. 30217184 2018
Entrez Id: 1298
Gene Symbol: COL9A2
COL9A2
0.040 GeneticVariation disease BEFREE Genetic studies have demonstrated that a polymorphism (Trp2 allele) in COL9A2 coding for alpha2 chain of collagen IX predisposes the individual to disc degeneration. 18246003 2007
Entrez Id: 5903
Gene Symbol: RANBP2
RANBP2
0.040 GeneticVariation disease BEFREE Genetic studies have demonstrated that a polymorphism (Trp2 allele) in COL9A2 coding for alpha2 chain of collagen IX predisposes the individual to disc degeneration. 18246003 2007
Entrez Id: 4312
Gene Symbol: MMP1
MMP1
0.040 GeneticVariation disease BEFREE Moreover, in the patients, the MMP1 2G allele was not directly related to the disk degeneration. 23370084 2013
Entrez Id: 7218
Gene Symbol: TRP-AGG2-6
TRP-AGG2-6
0.040 GeneticVariation disease BEFREE However, it is not known whether the Trp2 or Trp3 alleles contribute to disc degeneration (DD). 16133074 2006
Entrez Id: 7218
Gene Symbol: TRP-AGG2-6
TRP-AGG2-6
0.040 GeneticVariation disease BEFREE Genetic studies have demonstrated that a polymorphism (Trp2 allele) in COL9A2 coding for alpha2 chain of collagen IX predisposes the individual to disc degeneration. 18246003 2007
Entrez Id: 7218
Gene Symbol: TRP-AGG2-6
TRP-AGG2-6
0.040 GeneticVariation disease BEFREE Degeneration scores were significantly worse in cases with COL1A1 Sp1, COL9a3 Trp3, and VDR TaqI mutations; however, COL9a2 Trp2 mutation was not associated with a difference in the severity of disc degeneration. 26342701 2015
Entrez Id: 1638
Gene Symbol: DCT
DCT
0.040 GeneticVariation disease BEFREE Genetic studies have demonstrated that a polymorphism (Trp2 allele) in COL9A2 coding for alpha2 chain of collagen IX predisposes the individual to disc degeneration. 18246003 2007
Entrez Id: 1298
Gene Symbol: COL9A2
COL9A2
0.040 GeneticVariation disease BEFREE Degeneration scores were significantly worse in cases with COL1A1 Sp1, COL9a3 Trp3, and VDR TaqI mutations; however, COL9a2 Trp2 mutation was not associated with a difference in the severity of disc degeneration. 26342701 2015
Entrez Id: 7218
Gene Symbol: TRP-AGG2-6
TRP-AGG2-6
0.040 GeneticVariation disease BEFREE The TRP2 allele of COL9A2 is an age-dependent risk factor for the development and severity of intervertebral disc degeneration. 16371896 2005
Entrez Id: 7222
Gene Symbol: TRPC3
TRPC3
0.040 GeneticVariation disease BEFREE From 45% to 71% of disc degeneration among persistently obese individuals with the Trp3 allele could be attributed to the synergism of these two factors. 12461395 2002
Entrez Id: 5903
Gene Symbol: RANBP2
RANBP2
0.040 GeneticVariation disease BEFREE The TRP2 allele of COL9A2 is an age-dependent risk factor for the development and severity of intervertebral disc degeneration. 16371896 2005
Entrez Id: 7222
Gene Symbol: TRPC3
TRPC3
0.040 GeneticVariation disease BEFREE Degeneration scores were significantly worse in cases with COL1A1 Sp1, COL9a3 Trp3, and VDR TaqI mutations; however, COL9a2 Trp2 mutation was not associated with a difference in the severity of disc degeneration. 26342701 2015