Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 60
Gene Symbol: ACTB
ACTB
0.020 Biomarker disease BEFREE IcsA* was located on lateral and polar regions of smooth LPS bacteria, and was fully functional in ABM assays (HeLa cell monolayer plaque and F-actin comet tail formation) which contrasts with the R-LPS phenotype. 12860454 2003
Entrez Id: 60
Gene Symbol: ACTB
ACTB
0.020 AlteredExpression disease BEFREE In addition, in CMF α-SMA protein levels were decreased by LPS treatment, which was abolished by TAK-242. 28220374 2017
Entrez Id: 27161
Gene Symbol: AGO2
AGO2
0.010 AlteredExpression disease BEFREE Chromatin immunoprecipitation assay indicates that increased occupancy of AGO2 to miR-15b promoter is responsible for the increased expression of miR-15b under the condition of LPS treatment. 27208409 2016
Entrez Id: 196
Gene Symbol: AHR
AHR
0.010 AlteredExpression disease BEFREE Furthermore, we demonstrated that the AhR-IDO pathway was responsible for the preferential activation of non-canonical NF-κB pathway in LPS-conditioned DCs. 28256612 2017
Entrez Id: 199
Gene Symbol: AIF1
AIF1
0.020 AlteredExpression disease BEFREE Furthermore, LYC down-regulated the expression of IBA-1 (a marker of microglia activation), reduced the levels of inflammatory mediators and inhibited oxidative stress in LPS-treated mice. 29454265 2018
Entrez Id: 199
Gene Symbol: AIF1
AIF1
0.020 AlteredExpression disease BEFREE Peripheral and central levels of cytokines decline 72 hrs after LPS-treatment whilst a significantly increase of Iba-1 expression was detected. 30133465 2018
Entrez Id: 207
Gene Symbol: AKT1
AKT1
0.020 PosttranslationalModification disease BEFREE Further analysis of LPS-signaling pathways revealed that LA delayed the phosphorylation of protein kinase B (AKT) as well as the degradation of IκBα. 25582773 2015
Entrez Id: 207
Gene Symbol: AKT1
AKT1
0.020 AlteredExpression disease BEFREE Additionally, allicin administration increased the protein expression of Bcl‑2 and reduced the activity of caspase‑3/-9, as determined by western blotting or ELISA, respectively, and increased phosphatidylinositol 3‑kinase (PI3K) and phosphorylated‑Akt protein levels, in LPS‑treated ALI neonatal rats. 29512749 2018
Entrez Id: 160
Gene Symbol: AP2A1
AP2A1
0.010 GeneticVariation disease BEFREE (2) To test for association, in nonsyndromic cleft lip and/or cleft palate (NSCL/P) and in VWS/PPS families, the single nucleotide polymorphism (SNP) rs642961, from the IRF6 enhancer AP-2α region, alone or as haplotype with rs2235371, a coding SNP (rs2235371" genes_norm="3664">Val274Ile). 23394314 2014
Entrez Id: 383
Gene Symbol: ARG1
ARG1
0.010 AlteredExpression disease BEFREE RT-PCR, western blotting, and immunohistochemical analysis demonstrated decreased iNOS expression and increased arginase 1 expression in the CAP-treated LPS-lesioned SN. 29968707 2018
Entrez Id: 596
Gene Symbol: BCL2
BCL2
0.010 AlteredExpression disease BEFREE Additionally, allicin administration increased the protein expression of Bcl‑2 and reduced the activity of caspase‑3/-9, as determined by western blotting or ELISA, respectively, and increased phosphatidylinositol 3‑kinase (PI3K) and phosphorylated‑Akt protein levels, in LPS‑treated ALI neonatal rats. 29512749 2018
Entrez Id: 836
Gene Symbol: CASP3
CASP3
0.010 AlteredExpression disease BEFREE Additionally, allicin administration increased the protein expression of Bcl‑2 and reduced the activity of caspase‑3/-9, as determined by western blotting or ELISA, respectively, and increased phosphatidylinositol 3‑kinase (PI3K) and phosphorylated‑Akt protein levels, in LPS‑treated ALI neonatal rats. 29512749 2018
Entrez Id: 857
Gene Symbol: CAV1
CAV1
0.010 Biomarker disease BEFREE ACh stimulation also induced significantly higher NO levels in LPS-treated HUVECs/siCav-1 compared with LPS-treated HUVECs/si-NC cells (P<0.05). 30233709 2018
Entrez Id: 885
Gene Symbol: CCK
CCK
0.010 Biomarker disease BEFREE Cell viability and expression of proteins related to autophagy, AMPK and the mTOR pathway in LPS-treated Caco-2 cells were determined by CCK-8 assay and Western blot analysis, respectively. 30205395 2018
Entrez Id: 6366
Gene Symbol: CCL21
CCL21
0.010 AlteredExpression disease BEFREE Treatment with anti-IFN-γ mAb enhanced the expression of SLC and the accumulation of Treg cells in the lungs of α-GalCer/LPS-treated mice, whereas giving recombinant (r)IFN-γ reduced the number of Treg cells in mice treated with LPS alone. 29266409 2018
Entrez Id: 6352
Gene Symbol: CCL5
CCL5
0.010 AlteredExpression disease BEFREE In addition, DILC siRNA enhanced the expression of IL‑6, STAT3 and TLR4, whereas the expression levels of TNF‑α, CCL5, E‑selectin and CXCR1 in LPS‑treated THP‑1 cells were downregulated following transfection with DILC and IL‑6 siRNAs. 30365067 2018
Entrez Id: 595
Gene Symbol: CCND1
CCND1
0.010 AlteredExpression disease BEFREE Invivofectamine-CyD1 siRNA reduced the expression of CyD1 approximately by 46% compared to the basal condition, and by around 65% compared to EC-LPS treated colon samples. 27174173 2017
Entrez Id: 1000
Gene Symbol: CDH2
CDH2
0.010 GeneticVariation disease BEFREE Genome-wide linkage analysis and whole genome sequencing in a Van der Woude syndrome (VWS) family revealed that the SNP, rs539075, within intron 2 of the cadherin 2 gene (CDH2) co-segregated with the disease phenotype. 29524576 2018
Entrez Id: 149465
Gene Symbol: CFAP57
CFAP57
0.010 GeneticVariation disease BEFREE Genomic strategy identifies a missense mutation in WD-repeat domain 65 (WDR65) in an individual with Van der Woude syndrome. 21574244 2011
Entrez Id: 1269
Gene Symbol: CNR2
CNR2
0.010 AlteredExpression disease BEFREE First, we found elevated levels of the CB2 receptor measured by qRT-PCR in the striatum and substantia nigra of LPS-lesioned mice, as well as an increase in the immunostaining for this receptor in the LPS-lesioned striatum. 25863279 2016
Entrez Id: 6900
Gene Symbol: CNTN2
CNTN2
0.010 Biomarker disease BEFREE The TAX-1 gene has been mapped to a region on chromosome 1 that has been implicated in microcephaly and the Van der Woude syndrome. 11280781 2001
Entrez Id: 4513
Gene Symbol: COX2
COX2
0.020 AlteredExpression disease BEFREE The expression of COX-2 and IL-17 were significantly lower in samples treated with OLE + EC-LPS compared with those treated with EC-LPS alone (0.80 ± 0.15 arbitrary units (a.u.) vs. 1.06 ± 0.19 a.u., <i>p</i> = 0.003, and 0.71 ± 0.08 a.u. vs. 1.26 ± 0.42 a.u., <i>p</i> = 0.03, respectively) as were the levels of IL-17 in culture supernatants of OLE + EC-LPS treated colonic samples (21.16 ± 8.64 pg/mL vs. 40.67 ± 9.24 pg/mL, <i>p</i> = 0.01). 28420140 2017
Entrez Id: 4513
Gene Symbol: COX2
COX2
0.020 AlteredExpression disease BEFREE Consequently, GAL significantly decreased the levels of COX-2 and iNOS expression and the plasma levels of proinflammatory lipid mediators in LPS-treated mice. 29765489 2018
Entrez Id: 130749
Gene Symbol: CPO
CPO
0.010 GeneticVariation disease BEFREE A common syndromic form of orofacial clefting is Van der Woude syndrome (VWS) where individuals have CL/P or CPO, often but not always associated with lower lip pits. 27018475 2016
Entrez Id: 2920
Gene Symbol: CXCL2
CXCL2
0.010 Biomarker disease BEFREE Giving rIL-10 prolonged survival and attenuated lung injury as a result of reduced production of inflammatory cytokines (such as IL-1β, IL-6, TNF-α, and IFN-γ) and chemokines (including MCP-1, RANTES, IP-10, Mig, MIP-2, and KC) in α-GalCer/LPS-treated mice. 29266409 2018