Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 4314
Gene Symbol: MMP3
MMP3
0.300 Biomarker disease CTD_human Glycitein inhibits glioma cell invasion through down-regulation of MMP-3 and MMP-9 gene expression. 20188714 2010
Entrez Id: 4318
Gene Symbol: MMP9
MMP9
0.300 Biomarker disease CTD_human Glycitein inhibits glioma cell invasion through down-regulation of MMP-3 and MMP-9 gene expression. 20188714 2010
Entrez Id: 406991
Gene Symbol: MIR21
MIR21
0.010 AlteredExpression disease BEFREE Here we show that rapamycin treatment leads to the upregulation of miR-21 in both patients' serum and in primary SEGA tumor cells in the culture indicating the regulatory relationship between rapamycin treatment and miR-21 expression. 30509037 2018
Entrez Id: 3091
Gene Symbol: HIF1A
HIF1A
0.310 Biomarker disease CTD_human Hypoxia upregulates the expression of the NDRG1 gene leading to its overexpression in various human cancers. 15341671 2004
Entrez Id: 10397
Gene Symbol: NDRG1
NDRG1
0.300 Biomarker disease CTD_human Hypoxia upregulates the expression of the NDRG1 gene leading to its overexpression in various human cancers. 15341671 2004
Entrez Id: 4609
Gene Symbol: MYC
MYC
0.010 AlteredExpression disease BEFREE Immunocytochemical analysis of cortical tubers, as well as subependymal lesions in all cases confirmed the cell-associated activation of the TORC1 signaling pathway in both the cortical tubers and subependymal lesions (including a congenital subependymal giant cell astrocytoma) with expression of pS6, p4EBP1 and c-myc proteins, as well as of p70 S6 kinase 1. 22805177 2013
Entrez Id: 309
Gene Symbol: ANXA6
ANXA6
0.010 AlteredExpression disease BEFREE Immunocytochemical analysis of cortical tubers, as well as subependymal lesions in all cases confirmed the cell-associated activation of the TORC1 signaling pathway in both the cortical tubers and subependymal lesions (including a congenital subependymal giant cell astrocytoma) with expression of pS6, p4EBP1 and c-myc proteins, as well as of p70 S6 kinase 1. 22805177 2013
Entrez Id: 84959
Gene Symbol: UBASH3B
UBASH3B
0.010 AlteredExpression disease BEFREE Immunocytochemical analysis of cortical tubers, as well as subependymal lesions in all cases confirmed the cell-associated activation of the TORC1 signaling pathway in both the cortical tubers and subependymal lesions (including a congenital subependymal giant cell astrocytoma) with expression of pS6, p4EBP1 and c-myc proteins, as well as of p70 S6 kinase 1. 22805177 2013
Entrez Id: 4853
Gene Symbol: NOTCH2
NOTCH2
0.300 Biomarker disease CTD_human Inhibition of notch signaling blocks growth of glioblastoma cell lines and tumor neurospheres. 21127729 2010
Entrez Id: 23462
Gene Symbol: HEY1
HEY1
0.300 Biomarker disease CTD_human Inhibition of notch signaling blocks growth of glioblastoma cell lines and tumor neurospheres. 21127729 2010
Entrez Id: 23493
Gene Symbol: HEY2
HEY2
0.300 Biomarker disease CTD_human Inhibition of notch signaling blocks growth of glioblastoma cell lines and tumor neurospheres. 21127729 2010
Entrez Id: 10683
Gene Symbol: DLL3
DLL3
0.300 Biomarker disease CTD_human Inhibition of notch signaling blocks growth of glioblastoma cell lines and tumor neurospheres. 21127729 2010
Entrez Id: 4851
Gene Symbol: NOTCH1
NOTCH1
0.300 Biomarker disease CTD_human Inhibition of notch signaling blocks growth of glioblastoma cell lines and tumor neurospheres. 21127729 2010
Entrez Id: 7248
Gene Symbol: TSC1
TSC1
0.150 Biomarker disease BEFREE Mutations of the MAPK/TSC/mTOR pathway characterize periventricular glioblastoma with epithelioid SEGA-like morphology-morphological and therapeutic implications. 31258848 2019
Entrez Id: 54997
Gene Symbol: TESC
TESC
0.030 Biomarker disease BEFREE Mutations of the MAPK/TSC/mTOR pathway characterize periventricular glioblastoma with epithelioid SEGA-like morphology-morphological and therapeutic implications. 31258848 2019
Entrez Id: 6559
Gene Symbol: SLC12A3
SLC12A3
0.030 Biomarker disease BEFREE Mutations of the MAPK/TSC/mTOR pathway characterize periventricular glioblastoma with epithelioid SEGA-like morphology-morphological and therapeutic implications. 31258848 2019
Entrez Id: 1809
Gene Symbol: DPYSL3
DPYSL3
0.010 AlteredExpression disease BEFREE p34cdc2, collapsin response mediator protein 4 (CRMP4), doublecortin (DCX), HuD, and NeuN expression was assessed in tuber (n = 16) and subependymal giant cell astrocytoma (SEGA; n = 6) specimens in tuberous sclerosis complex to define the developmental phenotype and lineage of giant cells (CGs) in these lesions. 12731003 2003
Entrez Id: 1641
Gene Symbol: DCX
DCX
0.010 Biomarker disease BEFREE p34cdc2, collapsin response mediator protein 4 (CRMP4), doublecortin (DCX), HuD, and NeuN expression was assessed in tuber (n = 16) and subependymal giant cell astrocytoma (SEGA; n = 6) specimens in tuberous sclerosis complex to define the developmental phenotype and lineage of giant cells (CGs) in these lesions. 12731003 2003
Entrez Id: 7249
Gene Symbol: TSC2
TSC2
0.130 GeneticVariation disease BEFREE Patients with TSC2 mutations developed subependymal giant cell astrocytoma at a significantly younger age than individuals with TSC1 mutations. 24507694 2014
Entrez Id: 7249
Gene Symbol: TSC2
TSC2
0.130 GeneticVariation disease BEFREE Patients with TSC2 mutations, and especially with TSC2/PKD1 mutations, are more prone to develop SEGA earlier in childhood and should be screened for SEGA from birth. 25227171 2014
Entrez Id: 7248
Gene Symbol: TSC1
TSC1
0.150 GeneticVariation disease BEFREE Patients with TSC2 mutations developed subependymal giant cell astrocytoma at a significantly younger age than individuals with TSC1 mutations. 24507694 2014
Entrez Id: 5310
Gene Symbol: PKD1
PKD1
0.010 GeneticVariation disease BEFREE Patients with TSC2 mutations, and especially with TSC2/PKD1 mutations, are more prone to develop SEGA earlier in childhood and should be screened for SEGA from birth. 25227171 2014
Entrez Id: 9113
Gene Symbol: LATS1
LATS1
0.300 Biomarker disease CTD_human Promoter hypermethylation-mediated down-regulation of LATS1 and LATS2 in human astrocytoma. 17049657 2006
Entrez Id: 26524
Gene Symbol: LATS2
LATS2
0.300 Biomarker disease CTD_human Promoter hypermethylation-mediated down-regulation of LATS1 and LATS2 in human astrocytoma. 17049657 2006
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.310 Biomarker disease CTD_human Recurrent somatic alterations of FGFR1 and NTRK2 in pilocytic astrocytoma. 23817572 2013