Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 891
Gene Symbol: CCNB1
CCNB1
0.020 Biomarker disease BEFREE Germ cell tumors overexpress the candidate therapeutic target cyclin B1 independently of p53 function. 25982682 2015
Entrez Id: 25797
Gene Symbol: QPCT
QPCT
0.030 Biomarker disease BEFREE Germ cell tumors with somatic malignant transformation (GCT with SMT) are rare in children and poorly described. 28375941 2017
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.100 AlteredExpression disease BEFREE Germ cell tumors of the testis overexpress wild-type p53. 8863671 1996
Entrez Id: 7490
Gene Symbol: WT1
WT1
0.020 AlteredExpression disease BEFREE WT1 gene expression was detected in three of the four gastric cancer cell lines, all of the five colon cancer cell lines, 12 of the 15 lung cancer cell lines, two of the four breast cancer cell lines, the germ cell tumor cell line, the two ovarian cancer cell lines, the uterine cancer cell line, the thyroid cancer cell line, and the hepatocellular carcinoma cell line. 10189890 1999
Entrez Id: 2688
Gene Symbol: GH1
GH1
0.010 AlteredExpression disease BEFREE Growth hormone (GH) and placental lactogen (PL) gene transcription patterns in testicular germ cell tumors (GCT) and normal testicular tissue were comparatively investigated to identify GH/PL gene products associated with the development of GCT. 10534168 1999
Entrez Id: 8915
Gene Symbol: BCL10
BCL10
0.030 Biomarker disease BEFREE BCL10 is not a major target for frequent loss of 1p in testicular germ cell tumors. 11376806 2001
Entrez Id: 6638
Gene Symbol: SNRPN
SNRPN
0.020 PosttranslationalModification disease BEFREE SNRPN methylation patterns in germ cell tumors as a reflection of primordial germ cell development. 11746975 2001
Entrez Id: 7503
Gene Symbol: XIST
XIST
0.010 AlteredExpression disease BEFREE XIST expression was common in seminomatous testicular germ cell tumors (2 of 2 or 100% of seminoma derived cell lines and 10 of 12 or 83% of seminomatous testicular germ cell tumor tissues) but not in nonseminomatous testicular germ cell tumors (0 of 2 or 0% nonseminoma derived cell lines and 2 of 8 or 25% of nonseminomatous testicular germ cell tumor tissues). 12629412 2003
Entrez Id: 5460
Gene Symbol: POU5F1
POU5F1
0.400 Biomarker disease BEFREE POU5F1 (OCT3/4) identifies cells with pluripotent potential in human germ cell tumors. 12727846 2003
Entrez Id: 2627
Gene Symbol: GATA6
GATA6
0.020 Biomarker disease BEFREE GATA-6, together with GATA-4, can thus be used as a novel molecular marker in characterizing of pediatric germ cell tumors. 12867597 2003
Entrez Id: 3090
Gene Symbol: HIC1
HIC1
0.010 PosttranslationalModification disease BEFREE HIC1 methylation was frequent in medulloblastomas (80%, 12 of 15), retinoblastomas (67%, 6 of 9), rhabdomyosarcomas (59%, 13 of 22), germ cell tumors (55%, 6 of 11), and neurouroblastic tumors (36%, 14 of 39); neuroblastomas (43%, 12 of 28); ganglioneuromas (17%, 1 of 6); and ganglioneuroblastomas (20%, 1 of 5). 14506157 2003
Entrez Id: 2100
Gene Symbol: ESR2
ESR2
0.010 AlteredExpression disease BEFREE Estrogen receptor-beta expression in human testicular germ cell tumors. 14555521 2003
Entrez Id: 5371
Gene Symbol: PML
PML
0.010 AlteredExpression disease BEFREE PML protein expression was reduced or abolished in prostate adenocarcinomas (63% [95% confidence interval [CI] = 48% to 78%] and 28% [95% CI = 13% to 43%], respectively), colon adenocarcinomas (31% [95% CI = 22% to 40%] and 17% [95% CI = 10% to 24%]), breast carcinomas (21% [95% CI = 8% to 34%] and 31% [95% CI = 16% to 46%]), lung carcinomas (36% [95% CI = 15% to 57%] and 21% [95% = 3% to 39%]), lymphomas (14% [95% CI = 10% to 18%] and 69% [95% CI = 63% to 75%]), CNS tumors (24% [95% CI = 13% to 35%] and 49% [95% CI = 36% to 62%]), and germ cell tumors (36% [95% CI = 24% to 48%] and 48% [95% CI = 36% to 60%]) but not in thyroid or adrenal carcinomas. 14970276 2004
Entrez Id: 374654
Gene Symbol: KIF7
KIF7
0.010 AlteredExpression disease BEFREE KIF7 mRNA was expressed in embryonic stem (ES) cells, melanotic melanoma and Jurkat T cells, while KIF27 mRNA was expressed in testis, pancreatic islet, germ cell tumors and Jurkat T cells. 15547730 2004
Entrez Id: 3481
Gene Symbol: IGF2
IGF2
0.060 Biomarker disease BEFREE IGF2/H19 imprinting analysis of human germ cell tumors (GCTs) using the methylation-sensitive single-nucleotide primer extension method reflects the origin of GCTs in different stages of primordial germ cell development. 16001432 2005
Entrez Id: 957
Gene Symbol: ENTPD5
ENTPD5
0.010 AlteredExpression disease BEFREE PCPH expression is an early event in the development of testicular germ cell tumors. 16465363 2006
Entrez Id: 728137
Gene Symbol: TSPY3
TSPY3
0.040 Biomarker disease BEFREE TSPY protein localized with established germ cell tumor markers, such as the placental alkaline phosphatase, c-KIT, and OCT3/4, in the same tumor cells of both gonadoblastoma and adjacent carcinoma in situ, the precursor for germ cell tumors. 17349529 2007
Entrez Id: 100289087
Gene Symbol: TSPY10
TSPY10
0.040 Biomarker disease BEFREE TSPY protein localized with established germ cell tumor markers, such as the placental alkaline phosphatase, c-KIT, and OCT3/4, in the same tumor cells of both gonadoblastoma and adjacent carcinoma in situ, the precursor for germ cell tumors. 17349529 2007
Entrez Id: 7258
Gene Symbol: TSPY1
TSPY1
0.040 Biomarker disease BEFREE TSPY protein localized with established germ cell tumor markers, such as the placental alkaline phosphatase, c-KIT, and OCT3/4, in the same tumor cells of both gonadoblastoma and adjacent carcinoma in situ, the precursor for germ cell tumors. 17349529 2007
Entrez Id: 3815
Gene Symbol: KIT
KIT
0.100 GeneticVariation disease BEFREE c-KIT is mutated in some seminomas and bilateral germ cell tumors. 18363516 2008
Entrez Id: 4023
Gene Symbol: LPL
LPL
0.010 Biomarker disease BEFREE Lipoprotein lipase and endothelial lipase in human testis and in germ cell neoplasms. 19780863 2010
Entrez Id: 2067
Gene Symbol: ERCC1
ERCC1
0.300 Biomarker disease CTD_human ERCC1 and XPF expression in human testicular germ cell tumors. 19956886 2010
Entrez Id: 23569
Gene Symbol: PADI4
PADI4
0.010 Biomarker disease BEFREE PADI4 was detected in serious cystadenocarcinoma (n=39, positivity=100%), clear cell cancer (n=7, positivity= 100%), mucinous cystadenocarcinoma (n=6, positivity=100%), dysgerminoma (n=6, positivity=100%), squamous cell tumor (n=6, positivity=100%), sibnet-ring cell carcinoma (n=6, positivity=100%), endodermal sinus tumor (n=6, positivity=100%), germ cell tumors (n=6, positivity=100%) and immature teratoma (n=6, positivity=100%). 20827398 2010
Entrez Id: 8433
Gene Symbol: UTF1
UTF1
0.010 AlteredExpression disease BEFREE UTF1 was differentially expressed in testicular germ cell tumors. 20855642 2010
Entrez Id: 26240
Gene Symbol: FAM50B
FAM50B
0.010 AlteredExpression disease BEFREE FAM50B expression is deregulated in testicular germ cell tumors, and loss of imprinting occurs frequently in testicular seminomas, suggesting an important role for FAM50B in spermatogenesis and tumorigenesis. 21421564 2011