Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 9429
Gene Symbol: ABCG2
ABCG2
0.010 AlteredExpression disease BEFREE As a positive control, three dermatofibrosarcomas were also stained and showed ABCG2 protein expression of the endothelial cells of the blood vessels. 16008690 2005
Entrez Id: 4320
Gene Symbol: MMP11
MMP11
0.010 AlteredExpression disease BEFREE Interestingly, stromelysin-3, co-localizing with procollagen I mRNA, was consistently expressed in lesional cells in dermatofibromas (19/19), but not in dermatofibrosarcomas (0/7). 8757754 1996
Entrez Id: 80310
Gene Symbol: PDGFD
PDGFD
0.020 Biomarker disease BEFREE Following identification of an index patient with a novel COL6A3-PDGFD fusion gene, we undertook a molecular investigation, using a combination of RNA sequencing and fluorescence in situ hybridization (FISH), to assess the prevalence of PDGFD rearrangement in dermatofibrosarcoma protuberans (N = 63). 30014607 2018
Entrez Id: 80310
Gene Symbol: PDGFD
PDGFD
0.020 Biomarker disease BEFREE PDGFD-rearranged dermatofibrosarcoma protuberans presented clinical outcomes similar to typical dermatofibrosarcoma protuberans. 29955147 2018
Entrez Id: 5159
Gene Symbol: PDGFRB
PDGFRB
0.020 Biomarker disease BEFREE Alteration of PDGFRβ-Akt-mTOR pathway signaling in fibrosarcomatous transformation of dermatofibrosarcoma protuberans. 28711648 2017
Entrez Id: 5159
Gene Symbol: PDGFRB
PDGFRB
0.020 Biomarker disease BEFREE The abnormal fusion transcripts probably cause PDGFB and its receptor (platelet-derived growth factor receptor beta, PDGFRB) autocrine stimulation and cell proliferation, which are responsible for the development of dermatofibrosarcoma protuberans. 17431412 2007
Entrez Id: 5159
Gene Symbol: PDGFRB
PDGFRB
0.020 AlteredExpression disease LHGDN The abnormal fusion transcripts probably cause PDGFB and its receptor (platelet-derived growth factor receptor beta, PDGFRB) autocrine stimulation and cell proliferation, which are responsible for the development of dermatofibrosarcoma protuberans. 17431412 2007
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.030 GeneticVariation disease BEFREE Microsatellite instability and p53 mutation associated with tumor progression in dermatofibrosarcoma protuberans. 14991543 2004
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.030 GeneticVariation disease LHGDN Microsatellite instability and p53 mutation associated with tumor progression in dermatofibrosarcoma protuberans. 14991543 2004
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.030 Biomarker disease BEFREE Dermatofibrosarcoma protuberans with fibrosarcomatous areas. Molecular abnormalities of the p53 pathway in fibrosarcomatous transformation of dermatofibrosarcoma protuberans. 9808434 1998
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.030 Biomarker disease BEFREE Four MFHs and nine other types of sarcoma (four leiomyosarcomas, two chondrosarcomas, one liposarcoma, one fibrosarcoma, and one dermatofibrosarcoma protuberans) showed nuclear positivity for p53. 1333524 1992
Entrez Id: 947
Gene Symbol: CD34
CD34
0.100 Biomarker disease BEFREE In children, cutaneous and superficial soft-tissue neoplasms with CD34-positive spindle cells are associated with benign to intermediate malignancy potential and include lipofibromatosis, plaque-like CD34-positive dermal fibroma, fibroblastic connective tissue nevus, and congenital dermatofibrosarcoma protuberans. 30187166 2019
Entrez Id: 1277
Gene Symbol: COL1A1
COL1A1
0.100 AlteredExpression disease BEFREE Molecular biology has been valuable in showing dermatofibrosarcoma protuberans and infantile fibrosarcoma that are characterized by COL1A1-PDGFB and ETV6-NTRK3 rearrangements respectively. 30187166 2019
Entrez Id: 1277
Gene Symbol: COL1A1
COL1A1
0.100 Biomarker disease BEFREE Dermatofibrosarcoma protuberans is underlined by recurrent collagen type I alpha 1 chain-platelet-derived growth factor B chain (COL1A1-PDGFB) fusions but ~ 4% of typical dermatofibrosarcoma protuberans remain negative for this translocation in routine molecular screening. 29955147 2018
Entrez Id: 947
Gene Symbol: CD34
CD34
0.100 AlteredExpression disease BEFREE Two metastatic alveolar rhabdomyosarcomas were myf4 positive, a metastasis of a gynecologic leiomyosarcoma was positive for actin and estrogen receptor (ER) and a recurrent dermatofibrosarcoma protuberans expressed CD34. 29318761 2018
Entrez Id: 1277
Gene Symbol: COL1A1
COL1A1
0.100 AlteredExpression disease BEFREE Application of COL1A1-PDGFB fusion gene detection by fluorescence in situ hybridization in biopsy tissue of dermatofibrosarcoma protuberans. 28150334 2017
Entrez Id: 947
Gene Symbol: CD34
CD34
0.100 Biomarker disease BEFREE Nestin is the best immunohistochemical marker for SAF with higher sensitivity than CD34, although nestin is also positive in dermatofibrosarcoma protuberans and therefore is not helpful in differential diagnosis between SAF and dermatofibrosarcoma protuberans. 28045748 2017
Entrez Id: 1277
Gene Symbol: COL1A1
COL1A1
0.100 GeneticVariation disease BEFREE Dermatofibrosarcoma protuberans is characterized by a specific translocation t(17;22)(q22;q13) leading to the formation of COL1A1-PDGFB fusion transcripts. 27806849 2016
Entrez Id: 947
Gene Symbol: CD34
CD34
0.100 Biomarker disease BEFREE Eligibility criteria included: biopsy or surgical resection; suspicion of: dermatofibrosarcoma protuberans (cohort 1), dedifferentiated liposarcoma (cohort 2), Ewing's sarcoma family of tumours (cohort 3), synovial sarcoma (cohort 4), alveolar rhabdomyosarcoma (cohort 5), and myxoid or round cell liposarcoma (cohort 6); review by one sarcoma-expert pathologist; availability of frozen material (except for cohort 1 of patients with dermatofibrosarcoma protuberans because anti-CD34 immunohistochemistry is performed on paraffin-embedded tissue); and patient information. 26970672 2016
Entrez Id: 1277
Gene Symbol: COL1A1
COL1A1
0.100 GeneticVariation disease BEFREE Cytogenetically, most dermatofibrosarcoma protuberans are characterized by chromosomal rearrangements resulting in the collagen type-1 alpha 1 (COL1A1)-platelet-derived growth factor β (PDGFB) fusion gene. 25081750 2015
Entrez Id: 1277
Gene Symbol: COL1A1
COL1A1
0.100 GeneticVariation disease BEFREE Atrophic dermatofibrosarcoma protuberans with the fusion gene COL1A1-PDGFB detected by RT-PCR using only a single primer pair. 26261653 2015
Entrez Id: 1277
Gene Symbol: COL1A1
COL1A1
0.100 Biomarker disease BEFREE A rapid and efficient newly established method to detect COL1A1-PDGFB gene fusion in dermatofibrosarcoma protuberans. 22842571 2012
Entrez Id: 1277
Gene Symbol: COL1A1
COL1A1
0.100 GeneticVariation disease BEFREE Identification of t(17;22)(q22;q13) (COL1A1/PDGFB) in dermatofibrosarcoma protuberans by fluorescence in situ hybridization in paraffin-embedded tissue microarrays. 21111450 2011
Entrez Id: 947
Gene Symbol: CD34
CD34
0.100 Biomarker disease BEFREE Plaque-like CD34-positive dermal fibroma ("medallion-like dermal dendrocyte hamartoma"): clinicopathologic, immunohistochemical, and molecular analysis of 5 cases emphasizing its distinction from superficial, plaque-like dermatofibrosarcoma protuberans. 20061935 2010
Entrez Id: 947
Gene Symbol: CD34
CD34
0.100 AlteredExpression disease BEFREE The CD34 expression plays a key role in the differential diagnosis of some tumors, such as dermatofibrosarcoma protuberans, epithelioid sarcoma or pleomorphic hyalinizing angiectatic tumor of soft parts, with important therapeutic consequences. 19125742 2009