Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.040 GeneticVariation disease BEFREE In patient 1, the normal p53 gene was lost while the mutant p53 allele was reduced to homozygosity in the RMS. 11494139 2001
Entrez Id: 2308
Gene Symbol: FOXO1
FOXO1
0.100 Biomarker disease BEFREE In this investigation, we selected PAX3/FKHR and PAX7/FKHR fusion transcript-positive and -negative alveolar rhabdomyosarcomas (ARMSs) and embryonal rhabdomyosarcomas (ERMSs) with and without anaplastic features, to ascertain genomic imbalance differences and/or similarities within these histopathologic and genetic rhabdomyosarcoma (RMS) variants. 11807989 2002
Entrez Id: 5081
Gene Symbol: PAX7
PAX7
0.090 AlteredExpression disease BEFREE In this investigation, we selected PAX3/FKHR and PAX7/FKHR fusion transcript-positive and -negative alveolar rhabdomyosarcomas (ARMSs) and embryonal rhabdomyosarcomas (ERMSs) with and without anaplastic features, to ascertain genomic imbalance differences and/or similarities within these histopathologic and genetic rhabdomyosarcoma (RMS) variants. 11807989 2002
Entrez Id: 3480
Gene Symbol: IGF1R
IGF1R
0.010 Biomarker disease BEFREE In summary, these results indicate that genomic gains and losses involve alike chromosomes with similar frequencies within the histopathologic and genetic subtypes of rhabdomyosarcoma, that genomic amplification is frequent not only in the alveolar histologic subtype of rhabdomyosarcoma but also in ERMS with anaplasia, and that amplification of IGF1R possibly plays a role in the development or progression of a subset of rhabdomyosarcomas. 11807989 2002
Entrez Id: 328
Gene Symbol: APEX1
APEX1
0.010 AlteredExpression disease LHGDN Histology-specific expression of a DNA repair protein in pediatric rhabdomyosarcomas. 11846302 2001
Entrez Id: 2308
Gene Symbol: FOXO1
FOXO1
0.100 Biomarker disease BEFREE By fluorescence in situ hybridization analysis, the tumor cells were negative for FKHR-disrupting translocations specific for alveolar type of RMS and for NMYC gene amplification. 12550761 2003
Entrez Id: 4613
Gene Symbol: MYCN
MYCN
0.020 Biomarker disease BEFREE By fluorescence in situ hybridization analysis, the tumor cells were negative for FKHR-disrupting translocations specific for alveolar type of RMS and for NMYC gene amplification. 12550761 2003
Entrez Id: 5077
Gene Symbol: PAX3
PAX3
0.100 AlteredExpression disease BEFREE Aberrant PAX3 and PAX7 expression. A link to the metastatic potential of embryonal rhabdomyosarcoma and cutaneous malignant melanoma? 12647804 2003
Entrez Id: 5081
Gene Symbol: PAX7
PAX7
0.090 AlteredExpression disease BEFREE Aberrant PAX3 and PAX7 expression. A link to the metastatic potential of embryonal rhabdomyosarcoma and cutaneous malignant melanoma? 12647804 2003
Entrez Id: 5081
Gene Symbol: PAX7
PAX7
0.090 AlteredExpression disease BEFREE PAX7 expression in embryonal rhabdomyosarcoma suggests an origin in muscle satellite cells. 12865925 2003
Entrez Id: 5081
Gene Symbol: PAX7
PAX7
0.090 AlteredExpression disease LHGDN PAX7 expression in embryonal rhabdomyosarcoma suggests an origin in muscle satellite cells. 12865925 2003
Entrez Id: 7015
Gene Symbol: TERT
TERT
0.010 AlteredExpression disease LHGDN Telomerase activity in cell lines of pediatric soft tissue sarcomas. 12904596 2003
Entrez Id: 2735
Gene Symbol: GLI1
GLI1
0.030 Biomarker disease LHGDN Amplification of CDK4, MDM2, SAS and GLI genes in leiomyosarcoma, alveolar and embryonal rhabdomyosarcoma. 15024701 2004
Entrez Id: 1019
Gene Symbol: CDK4
CDK4
0.020 Biomarker disease LHGDN Amplification of CDK4, MDM2, SAS and GLI genes in leiomyosarcoma, alveolar and embryonal rhabdomyosarcoma. 15024701 2004
Entrez Id: 4193
Gene Symbol: MDM2
MDM2
0.020 Biomarker disease LHGDN Amplification of CDK4, MDM2, SAS and GLI genes in leiomyosarcoma, alveolar and embryonal rhabdomyosarcoma. 15024701 2004
Entrez Id: 6302
Gene Symbol: TSPAN31
TSPAN31
0.010 Biomarker disease LHGDN Amplification of CDK4, MDM2, SAS and GLI genes in leiomyosarcoma, alveolar and embryonal rhabdomyosarcoma. 15024701 2004
Entrez Id: 2308
Gene Symbol: FOXO1
FOXO1
0.100 AlteredExpression disease LHGDN To explore molecular pathways altered by this oncoprotein, we generated an inducible form by fusing PAX3-FKHR to a modified estrogen receptor ligand-binding domain and expressed this construct in the RD embryonal rhabdomyosarcoma cell line. 15184910 2004
Entrez Id: 5077
Gene Symbol: PAX3
PAX3
0.100 AlteredExpression disease LHGDN To explore molecular pathways altered by this oncoprotein, we generated an inducible form by fusing PAX3-FKHR to a modified estrogen receptor ligand-binding domain and expressed this construct in the RD embryonal rhabdomyosarcoma cell line. 15184910 2004
Entrez Id: 5081
Gene Symbol: PAX7
PAX7
0.090 AlteredExpression disease LHGDN Inducible short-term and stable long-term cell culture systems reveal that the PAX3-FKHR fusion oncoprotein regulates CXCR4, PAX3, and PAX7 expression. 15184910 2004
Entrez Id: 7852
Gene Symbol: CXCR4
CXCR4
0.010 AlteredExpression disease LHGDN Inducible short-term and stable long-term cell culture systems reveal that the PAX3-FKHR fusion oncoprotein regulates CXCR4, PAX3, and PAX7 expression. 15184910 2004
Entrez Id: 2308
Gene Symbol: FOXO1
FOXO1
0.100 GeneticVariation disease BEFREE The majority, but not all, alveolar rhabdomyosarcoma carry the specific PAX3(7)/FKHR-translocation, whereas there is no consistent genetic abnormality recognized in embryonal rhabdomyosarcoma. 15313887 2004
Entrez Id: 5077
Gene Symbol: PAX3
PAX3
0.100 GeneticVariation disease BEFREE The majority, but not all, alveolar rhabdomyosarcoma carry the specific PAX3(7)/FKHR-translocation, whereas there is no consistent genetic abnormality recognized in embryonal rhabdomyosarcoma. 15313887 2004
Entrez Id: 701
Gene Symbol: BUB1B
BUB1B
0.320 GeneticVariation disease LHGDN In five families with mosaic variegated aneuploidy, including two with embryonal rhabdomyosarcoma, we identified truncating and missense mutations of BUB1B, which encodes BUBR1, a key protein in the mitotic spindle checkpoint. 15475955 2004
Entrez Id: 701
Gene Symbol: BUB1B
BUB1B
0.320 Biomarker disease CTD_human In five families with mosaic variegated aneuploidy, including two with embryonal rhabdomyosarcoma, we identified truncating and missense mutations of BUB1B, which encodes BUBR1, a key protein in the mitotic spindle checkpoint. 15475955 2004
Entrez Id: 4656
Gene Symbol: MYOG
MYOG
0.050 Biomarker disease BEFREE Of the 61 interpretable tumor samples (41 ARMS and 20 ERMS) that contained > 50% myogenin-positive cells, 44 (39 ARMS and 5 ERMS) yielded detectable PAX fusion transcripts. 15536621 2004