Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 7030
Gene Symbol: TFE3
TFE3
0.400 GeneticVariation disease BEFREE The study objective was to develop and validate a TFE3 break-apart fluorescence in situ hybridization (FISH) assay to confirm Xp11 translocation RCCs and ASPS. 26415891 2015
Entrez Id: 7030
Gene Symbol: TFE3
TFE3
0.400 GeneticVariation disease BEFREE Real-time quantitative polymerase chain reaction testing confirmed the presence of ASPSCR1-TFE3 fusion transcripts, characteristic of the translocation t(X;17) p(11.2;q25) observed in ASPS. 30744536 2020
Entrez Id: 7030
Gene Symbol: TFE3
TFE3
0.400 Biomarker disease BEFREE TFE3 regulates both Golgi and lysosomal homeostasis and is rearranged in renal cell carcinoma (RCC), alveolar soft part sarcoma, epithelioid hemangioendothelioma, and perivascular epitheloid cell tumors (PEComas). 31774608 2020
Entrez Id: 7030
Gene Symbol: TFE3
TFE3
0.400 AlteredExpression disease BEFREE Immunostaining showed that all Xp11.2 RCC and ASPS cases had strong TFE3 expression and high positive ratios for p53 and vimentin. 24427344 2014
Entrez Id: 7030
Gene Symbol: TFE3
TFE3
0.400 GeneticVariation disease BEFREE These cells grew slowly and were expanded over a period of 3 years and have maintained characteristics consistent with those of both the original ASPS tumor from the patient and the xenograft tumor including (1) presence of the alveolar soft part locus-transcription factor E3 type 1 fusion transcript and nuclear expression of the alveolar soft part locus-transcription factor E3 type 1 fusion protein; (2) maintenance of the t(X;17)(p11;q25) translocation characteristic of ASPS; and (3) expression of upregulated ASPS transcripts involved in angiogenesis (ANGPTL2, HIF-1-α, MDK, c-MET, VEGF, and TIMP-2), cell proliferation (PRL, PCSK1), metastasis (ADAM9), as well as the transcription factor BHLHB3 and the muscle-specific transcripts TRIM63 and ITGβ1BP3. 21552147 2011
Entrez Id: 7030
Gene Symbol: TFE3
TFE3
0.400 Biomarker disease BEFREE Molecular confirmation of ASPSCR1-TFE3 gene fusion is applicable to routinely processed archival and diagnostic tumour samples and aids in the differential diagnosis of ASPS. 17543078 2007
Entrez Id: 7030
Gene Symbol: TFE3
TFE3
0.400 Biomarker disease BEFREE Given that the two derivative chromosomes of a translocation in G2 would be expected to segregate together half the time, the predominance of an unbalanced der(17)t(X;17) also raises the possibility of a selective advantage in ASPS cells for gain of Xp11.2-->pter or loss of 17q25.3-->qter or retention of an active copy of TFE3. 15952162 2005
Entrez Id: 7030
Gene Symbol: TFE3
TFE3
0.400 GeneticVariation disease BEFREE Alveolar soft part sarcoma (ASPS) is a rare mesenchymal tumor characterized by ASPL-TFE3 translocation. 29350467 2018
Entrez Id: 7030
Gene Symbol: TFE3
TFE3
0.400 AlteredExpression disease BEFREE According to European Organization for Research and Treatment of Cancer (EORTC) efficacy criteria for soft tissue sarcoma, our study demonstrated that crizotinib has activity in TFE3 rearranged ASPS MET+ patients. 29216400 2018
Entrez Id: 7030
Gene Symbol: TFE3
TFE3
0.400 GeneticVariation disease BEFREE The molecular signature of ASPS is a specific der(17)t(X;17)(p11.2;q25) translocation, which results in the fusion of TFE3 transcription factor gene at Xp11.2 with ASPL at 17q25. 26369552 2015
Entrez Id: 7030
Gene Symbol: TFE3
TFE3
0.400 AlteredExpression disease BEFREE Integration of these data with expression profiles of ASPS tumour samples and inducible cell lines expressing ASPSCR1-TFE3 defined a subset of 332 genes as putative up-regulated direct targets of ASPSCR1-TFE3, including MET (a previously known target gene) and 64 genes as down-regulated targets of ASPSCR1-TFE3. 23288701 2013
Entrez Id: 7030
Gene Symbol: TFE3
TFE3
0.400 Biomarker disease BEFREE Immunohistochemical discrimination between the ASPL-TFE3 fusion proteins of alveolar soft part sarcoma. 18176180 2008
Entrez Id: 7030
Gene Symbol: TFE3
TFE3
0.400 Biomarker disease BEFREE TFE3 staining and knowledge of its microscopic characteristics would facilitate earlier diagnosis: Early diagnosis with a multidisciplinary, multimodal approach to treatment is required to achieve extended disease-free survival in patients with brain metastatic ASPS. 29113207 2017
Entrez Id: 7030
Gene Symbol: TFE3
TFE3
0.400 AlteredExpression disease BEFREE The current report describes a unique case of vulvovaginal alveolar soft part sarcoma showing the classic morphologic features with documentation of TFE3 protein expression and the ASPL-TFE3 gene rearrangement. 24681737 2014
Entrez Id: 7030
Gene Symbol: TFE3
TFE3
0.400 GeneticVariation disease BEFREE Renal carcinomas associated with Xp11.2 translocations that result in fusions involving the TFE3 transcription factor gene have been delineated, including a distinctive neoplasm that shares the identical gene fusion as alveolar soft part sarcoma. 12973047 2003
Entrez Id: 7030
Gene Symbol: TFE3
TFE3
0.400 FusionGene disease ORPHANET Detection of ASPL/TFE3 fusion transcripts and the TFE3 antigen in formalin-fixed, paraffin-embedded tissue in a series of 18 cases of alveolar soft part sarcoma: useful diagnostic tools in cases with unusual histological features. 21279521 2011
Entrez Id: 7030
Gene Symbol: TFE3
TFE3
0.400 GeneticVariation disease BEFREE Alveolar soft-part sarcoma (ASPS) is a rare neoplasm with chromosomal translocation that results in ASPL-TFE3 fusion. 18714394 2008
Entrez Id: 7030
Gene Symbol: TFE3
TFE3
0.400 GeneticVariation disease BEFREE Following identification of an index case of ASPS with a novel TFE3 fusion partner, we performed a retrospective review to determine whether this represents an isolated event. 31433528 2019
Entrez Id: 7030
Gene Symbol: TFE3
TFE3
0.400 GeneticVariation disease BEFREE Alveolar soft part sarcoma (ASPS) is a rare malignancy with high rates of metastasis at presentation, defined by an unclear cellular origin and a unique unbalanced ASPSCR1-TFE3 translocation (der(17)t(X:17)(p11:q25)).<sup>1</sup> ASPS is insensitive to chemotherapy and has been reported to involve the bladder only twice in the pediatric literature; once as a primary malignancy,<sup>2</sup> and once as a secondary malignancy after cytotoxic chemotherapy.<sup>3</sup> Herein, we report the third case of pediatric bladder ASPS in a female patient who received cytotoxic chemotherapy for low-risk neuroblastoma. 30986487 2019
Entrez Id: 7030
Gene Symbol: TFE3
TFE3
0.400 GeneticVariation disease BEFREE All conventional sections from the Xp11.2 RCC and alveolar soft part sarcoma cases were positive for the TFE3 rearrangement by FISH.All remaining cases were negative. 21817901 2011
Entrez Id: 7030
Gene Symbol: TFE3
TFE3
0.400 GeneticVariation disease BEFREE The participation of the ASPL-TFE3 chimeric gene, translocation (X; 17) (p11; q25), has been demonstrated in ASPS. 21519815 2011
Entrez Id: 7030
Gene Symbol: TFE3
TFE3
0.400 GeneticVariation disease BEFREE Transcription factor E3 (TFE3) is a useful marker for tumors with Xp11.2 translocation, including alveolar soft part sarcoma and renal cell carcinoma. 31788112 2019
Entrez Id: 7030
Gene Symbol: TFE3
TFE3
0.400 GeneticVariation disease BEFREE A relationship between these renal tumors and ASPS was initially suggested by the cytogenetic finding of a balanced t(X;17)(p11.2;q25) in two of the cases, and the ASPL-TFE3 fusion transcripts were then confirmed by reverse transcriptase-polymerase chain reaction. 11438465 2001
Entrez Id: 7030
Gene Symbol: TFE3
TFE3
0.400 Biomarker disease BEFREE Oncogenic TFE3 fusion proteins define a subset of pediatric renal adenocarcinomas and one fusion (ASPL-TFE3) is also characteristic of alveolar soft part sarcoma (ASPS). 17283122 2007